Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004542g0010 Nicotiana tabacum HOM05D008559 ORTHO05D011161 5.2e-171 604.4 322 100.0
Nitab4.5_0013856g0010 Nicotiana tabacum HOM05D008559 ORTHO05D011161 6.4e-36 155.6 180 54.4
Nitab4.5_0002173g0030 Nicotiana tabacum HOM05D014863 ORTHO05D011161 3.0e-33 146.7 143 60.8
Nitab4.5_0000163g0050 Nicotiana tabacum HOM05D008559 ORTHO05D011161 1.5e-29 134.4 152 53.3
Nitab4.5_0000337g0190 Nicotiana tabacum HOM05D014863 ORTHO05D011161 4.5e-29 132.9 302 38.7
Nitab4.5_0000315g0130 Nicotiana tabacum HOM05D008559 ORTHO05D011161 2.2e-28 130.6 134 58.2
Nitab4.5_0013152g0020 Nicotiana tabacum HOM05D008559 ORTHO05D011161 1.1e-27 128.3 102 67.6
Nitab4.5_0000311g0110 Nicotiana tabacum HOM05D008559 ORTHO05D011161 3.2e-27 126.7 137 58.4
Nitab4.5_0004792g0020 Nicotiana tabacum HOM05D008559 ORTHO05D011161 9.3e-27 125.2 151 51.0
Nitab4.5_0004380g0010 Nicotiana tabacum HOM05D008559 ORTHO05D011161 2.7e-26 123.6 153 49.7
Nitab4.5_0000431g0120 Nicotiana tabacum HOM05D014863 ORTHO05D011161 6.0e-26 122.5 136 55.1
Nitab4.5_0000493g0110 Nicotiana tabacum HOM05D008559 ORTHO05D011161 8.7e-25 118.6 128 53.9
Nitab4.5_0002719g0010 Nicotiana tabacum HOM05D014863 ORTHO05D011161 3.3e-24 116.7 129 57.4
Nitab4.5_0004318g0020 Nicotiana tabacum HOM05D008559 ORTHO05D011161 4.3e-24 116.3 148 48.6
Nitab4.5_0000740g0110 Nicotiana tabacum HOM05D008559 ORTHO05D282931 5.6e-24 115.9 71 81.7
Nitab4.5_0000773g0010 Nicotiana tabacum HOM05D008559 ORTHO05D011161 1.3e-23 114.8 92 68.5
Nitab4.5_0001016g0050 Nicotiana tabacum HOM05D008559 ORTHO05D011161 1.3e-23 114.8 102 63.7
Nitab4.5_0003320g0020 Nicotiana tabacum HOM05D008559 ORTHO05D011161 1.3e-23 114.8 163 48.5
Nitab4.5_0000700g0040 Nicotiana tabacum HOM05D008559 ORTHO05D011161 1.1e-22 111.7 110 58.2
Nitab4.5_0002031g0130 Nicotiana tabacum HOM05D008559 ORTHO05D011161 1.1e-22 111.7 242 38.8
Nitab4.5_0006309g0050 Nicotiana tabacum HOM05D008559 ORTHO05D011161 1.1e-22 111.7 174 43.1
Nitab4.5_0000338g0200 Nicotiana tabacum HOM05D008559 ORTHO05D011161 1.5e-21 107.8 106 57.5
Nitab4.5_0000257g0050 Nicotiana tabacum HOM05D014863 ORTHO05D011161 9.9e-21 105.1 120 58.3
Nitab4.5_0000104g0250 Nicotiana tabacum HOM05D008559 ORTHO05D011161 2.2e-20 104.0 123 52.0
Nitab4.5_0000030g0030 Nicotiana tabacum HOM05D008559 ORTHO05D011161 2.4e-19 100.5 125 54.4
Nitab4.5_0011107g0010 Nicotiana tabacum HOM05D019424 ORTHO05D285801 1.0e-17 95.1 191 37.2
Nitab4.5_0000206g0150 Nicotiana tabacum HOM05D008559 ORTHO05D011161 1.8e-17 94.4 73 64.4
Nitab4.5_0000719g0070 Nicotiana tabacum HOM05D008559 ORTHO05D011161 2.8e-15 87.0 69 63.8
Nitab4.5_0002100g0090 Nicotiana tabacum HOM05D008559 ORTHO05D011161 5.8e-13 79.3 102 51.0
Nitab4.5_0000740g0100 Nicotiana tabacum HOM05D009453 ORTHO05D014242 2.9e-12 77.0 46 84.8
Nitab4.5_0006081g0020 Nicotiana tabacum HOM05D014863 ORTHO05D011161 6.5e-12 75.9 80 60.0
Nitab4.5_0000449g0040 Nicotiana tabacum HOM05D008559 ORTHO05D286507 8.4e-12 75.5 176 35.2
Nitab4.5_0000157g0320 Nicotiana tabacum HOM05D008559 ORTHO05D011161 3.2e-11 73.6 123 41.5
Nitab4.5_0000290g0050 Nicotiana tabacum HOM05D008559 ORTHO05D011161 3.2e-11 73.6 110 48.2
Nitab4.5_0004043g0020 Nicotiana tabacum HOM05D008559 ORTHO05D011161 2.1e-10 70.9 85 50.6
PGSC0003DMG400041497 Solanum tuberosum HOM05D008559 ORTHO05D026183 1.3e-09 68.2 138 34.8
PGSC0003DMG400042155 Solanum tuberosum HOM05D008559 ORTHO05D026183 3.0e-09 67.0 185 31.4
Nitab4.5_0000945g0060 Nicotiana tabacum HOM05D008559 ORTHO05D284281 3.9e-09 66.6 323 28.8
Nitab4.5_0000951g0030 Nicotiana tabacum HOM05D008559 ORTHO05D011161 6.7e-09 65.9 77 51.9
Nitab4.5_0002509g0020 Nicotiana tabacum HOM05D008559 ORTHO05D011161 6.7e-09 65.9 202 27.7
PGSC0003DMG400021037 Solanum tuberosum HOM05D008559 ORTHO05D026183 1.5e-08 64.7 82 39.0
Nitab4.5_0000107g0080 Nicotiana tabacum HOM05D008559 ORTHO05D283367 1.9e-08 64.3 70 50.0
Nitab4.5_0000449g0030 Nicotiana tabacum HOM05D009453 ORTHO05D285332 9.6e-08 62.0 68 54.4
Nitab4.5_0001268g0050 Nicotiana tabacum HOM05D008559 ORTHO05D011161 9.6e-08 62.0 104 50.0
Nitab4.5_0004854g0040 Nicotiana tabacum HOM05D009453 ORTHO05D282750 9.6e-08 62.0 58 62.1
Nitab4.5_0001294g0070 Nicotiana tabacum HOM05D009453 ORTHO05D014242 1.6e-07 61.2 93 46.2
Nitab4.5_0002998g0020 Nicotiana tabacum HOM05D009453 ORTHO05D000002 1.6e-07 61.2 59 61.0
Nitab4.5_0000450g0010 Nicotiana tabacum HOM05D009453 ORTHO05D014242 2.8e-07 60.5 63 57.1
Nitab4.5_0000006g0060 Nicotiana tabacum HOM05D008559 ORTHO05D283084 3.7e-07 60.1 118 32.2
Nitab4.5_0000479g0010 Nicotiana tabacum HOM05D009453 ORTHO05D014242 1.8e-06 57.8 63 55.6
Nitab4.5_0000713g0100 Nicotiana tabacum HOM05D009453 ORTHO05D284354 4.1e-06 56.6 104 41.3
Solyc11g039800.2 Solanum lycopersicum HOM05D008559 ORTHO05D026183 6.9e-06 55.8 159 32.7


User provided reference genes

Program Settings