Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004541g0010 Nicotiana tabacum HOM05D005529 ORTHO05D006800 6.4e-151 537.3 263 100.0
Peaxi162Scf00160g01637 Petunia axillaris HOM05D005529 ORTHO05D006800 2.8e-138 495.4 265 93.2
Solyc12g056770.3 Solanum lycopersicum HOM05D005529 ORTHO05D006800 3.8e-135 485.0 265 92.1
Sopen12g029450 Solanum pennellii HOM05D005529 ORTHO05D006800 3.8e-135 485.0 265 92.1
CAN.G26.7 Capsicum annuum HOM05D005529 ORTHO05D006800 1.4e-134 483.0 265 90.9
Cc10_g06360 Coffea canephora HOM05D005529 ORTHO05D006800 6.2e-130 467.6 265 86.8
PGSC0003DMG400016963 Solanum tuberosum HOM05D005529 ORTHO05D006800 1.5e-128 463.0 310 78.4
CSS0023417 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 2.0e-128 462.6 265 86.8
Actinidia15622 Actinidia chinensis HOM05D005529 ORTHO05D006800 5.8e-128 461.1 265 85.7
Lj4A706T78 Lonicera japonica HOM05D005529 ORTHO05D006800 4.9e-127 458.0 264 84.1
PGR042G1245 Punica granatum HOM05D005529 ORTHO05D006800 4.9e-127 458.0 265 84.5
Atru.chr13.1964 Acer truncatum HOM05D005529 ORTHO05D006800 8.4e-127 457.2 264 84.5
QL02p036323 Quercus lobata HOM05D005529 ORTHO05D006800 4.2e-126 454.9 263 85.2
CiPaw.15G011100 Carya illinoinensis HOM05D005529 ORTHO05D006800 9.3e-126 453.8 262 85.1
QL02p036742 Quercus lobata HOM05D005529 ORTHO05D006800 9.3e-126 453.8 263 84.8
Eucgr.F02670 Eucalyptus grandis HOM05D005529 ORTHO05D006800 1.6e-125 453.0 265 82.6
Thecc.08G196300 Theobroma cacao HOM05D005529 ORTHO05D006800 1.6e-125 453.0 265 83.0
Nitab4.5_0004295g0010 Nicotiana tabacum HOM05D005529 ORTHO05D006800 2.1e-125 452.6 221 98.6
Cpa.g.sc26.128 Carica papaya HOM05D005529 ORTHO05D006800 3.5e-125 451.8 265 83.4
GSVIVG01013675001 Vitis vinifera HOM05D005529 ORTHO05D006800 1.3e-124 449.9 265 83.0
Ciclev10002214m.g Citrus clementina HOM05D005529 ORTHO05D006800 2.3e-124 449.1 263 84.8
Migut.C00162 Erythranthe guttata HOM05D005529 ORTHO05D006800 3.9e-124 448.4 264 82.6
Migut.O00737 Erythranthe guttata HOM05D005529 ORTHO05D006800 3.9e-124 448.4 264 82.6
Glyma.10G219900 Glycine max HOM05D005529 ORTHO05D006800 3.9e-124 448.4 264 83.3
MD05G1037000 Malus domestica HOM05D005529 ORTHO05D006800 3.9e-124 448.4 264 84.5
Potri.005G199600 Populus trichocarpa HOM05D005529 ORTHO05D006800 6.7e-124 447.6 257 85.2
Haze_17835 Corylus avellana HOM05D005529 ORTHO05D006800 8.7e-124 447.2 264 84.8
Haze_17841 Corylus avellana HOM05D005529 ORTHO05D006800 8.7e-124 447.2 264 84.8
THA.LOC104800098 Tarenaya hassleriana HOM05D005529 ORTHO05D006800 1.1e-123 446.8 265 83.0
Psat6g189800 Pisum sativum HOM05D005529 ORTHO05D006800 1.5e-123 446.4 265 83.8
Prupe.8G045100 Prunus persica HOM05D005529 ORTHO05D006800 1.9e-123 446.0 264 83.7
DCAR_019977 Daucus carota HOM05D005529 ORTHO05D006800 2.5e-123 445.7 259 83.0
CiPaw.16G006900 Carya illinoinensis HOM05D005529 ORTHO05D006800 3.3e-123 445.3 262 82.8
Lj5g0011658 Lotus japonicus HOM05D005529 ORTHO05D006800 3.3e-123 445.3 265 82.6
Medtr1g097380 Medicago truncatula HOM05D005529 ORTHO05D006800 4.3e-123 444.9 265 82.6
Sabra05G0151800 Salix brachista HOM05D005529 ORTHO05D006800 5.6e-123 444.5 257 84.8
SGA_v2.0_scaffold161G37858 Striga asiatica HOM05D005529 ORTHO05D006800 5.6e-123 444.5 265 83.4
Glyma.20G171800 Glycine max HOM05D005529 ORTHO05D006800 7.4e-123 444.1 264 83.3
Phvul.007G085400 Phaseolus vulgaris HOM05D005529 ORTHO05D006800 1.3e-122 443.4 265 83.0
RcHm_v2.0_Chr6g0273541 Rosa chinensis HOM05D005529 ORTHO05D006800 2.1e-122 442.6 264 82.6
MSTRG.965 Avicennia marina HOM05D005529 ORTHO05D006800 2.8e-122 442.2 265 81.5
Aqoxy6G00458 Aquilegia oxysepala HOM05D005529 ORTHO05D006800 1.1e-121 440.3 265 81.9
CANSAT25G1808 Cannabis sativa HOM05D005529 ORTHO05D006800 1.1e-121 440.3 264 81.8
Manes.02G186100 Manihot esculenta HOM05D005529 ORTHO05D006800 1.1e-121 440.3 265 81.9
CsaV3_6G004830 Cucumis sativus L. HOM05D005529 ORTHO05D006800 2.4e-121 439.1 265 80.8
TPR.G23153 Trifolium pratense HOM05D005529 ORTHO05D006800 3.1e-121 438.7 265 81.5
TWI34G1474 Tripterygium wilfordii HOM05D005529 ORTHO05D006800 5.3e-121 438.0 265 82.6
FvH4_2g12750 Fragaria vesca HOM05D005529 ORTHO05D006800 9.0e-121 437.2 264 81.1
FAN15G0152 Fragaria x ananassa HOM05D005529 ORTHO05D006800 9.0e-121 437.2 264 81.1
FAN27G2439 Fragaria x ananassa HOM05D005529 ORTHO05D006800 9.0e-121 437.2 264 81.1
Thhalv10019028m.g Eutrema salsugineum HOM05D005529 ORTHO05D006800 1.5e-120 436.4 265 81.5
COL.COLO4_05242 Corchorus olitorius HOM05D005529 ORTHO05D006800 2.0e-120 436.0 265 80.8
Oeu027223.1 Olea europaea HOM05D005529 ORTHO05D006800 3.4e-120 435.3 265 83.0
PSO675G2610 Papaver somniferum HOM05D005529 ORTHO05D006800 3.4e-120 435.3 260 82.3
arahy.Tifrunner.gnm1.ann1.MD2PB3 Arachis hypogaea HOM05D005529 ORTHO05D006800 5.8e-120 434.5 265 80.8
arahy.Tifrunner.gnm1.ann1.PZ5J07 Arachis hypogaea HOM05D005529 ORTHO05D006800 5.8e-120 434.5 265 80.8
BcaC08g46609 Brassica carinata HOM05D005529 ORTHO05D006800 5.8e-120 434.5 265 81.1
A07p37940 Brassica napus HOM05D005529 ORTHO05D006800 5.8e-120 434.5 265 81.1
C06p45850 Brassica napus HOM05D005529 ORTHO05D006800 5.8e-120 434.5 265 81.1
BolC6t39637H Brassica oleracea HOM05D005529 ORTHO05D006800 5.8e-120 434.5 265 81.1
BraA07t31359Z Brassica rapa HOM05D005529 ORTHO05D006800 5.8e-120 434.5 265 81.1
AL2G31360 Arabidopsis lyrata HOM05D005529 ORTHO05D006800 1.0e-119 433.7 265 80.8
FAN24G1078 Fragaria x ananassa HOM05D005529 ORTHO05D006800 1.0e-119 433.7 264 80.7
Sc26g0003120 Simmondsia chinensis HOM05D005529 ORTHO05D006800 1.3e-119 433.3 265 79.2
unitig_32.g11170 Utricularia gibba HOM05D005529 ORTHO05D006800 1.3e-119 433.3 265 81.1
Lalb_Chr21g0305631 Lupinus albus HOM05D005529 ORTHO05D006800 1.7e-119 433.0 265 80.8
AT1G71790 Arabidopsis thaliana HOM05D005529 ORTHO05D006800 2.2e-119 432.6 265 80.8
Lalb_Chr06g0161811 Lupinus albus HOM05D005529 ORTHO05D006800 2.2e-119 432.6 265 81.1
Sp5g26810 Schrenkiella parvula HOM05D005529 ORTHO05D006800 2.2e-119 432.6 265 80.8
SpUn0095_0040 Schrenkiella parvula HOM05D005529 ORTHO05D006800 2.2e-119 432.6 265 80.8
AUR62032105 Chenopodium quinoa HOM05D005529 ORTHO05D006800 2.9e-119 432.2 279 78.1
Sed0025527 Sechium edule HOM05D005529 ORTHO05D006800 2.9e-119 432.2 265 79.2
Ah.05g168410 Amaranthus hybridus HOM05D005529 ORTHO05D006800 3.8e-119 431.8 265 79.6
CSS0035962 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 3.8e-119 431.8 265 81.5
PSO541G1243 Papaver somniferum HOM05D005529 ORTHO05D006800 4.9e-119 431.4 260 81.5
Carub.0002s1855 Capsella rubella HOM05D005529 ORTHO05D006800 6.5e-119 431.0 265 80.0
AUR62034931 Chenopodium quinoa HOM05D005529 ORTHO05D006800 1.4e-118 429.9 279 77.4
Aa31LG4G8850 Aethionema arabicum HOM05D005529 ORTHO05D006800 2.5e-118 429.1 259 80.7
VMungo0720G3143 Vigna mungo HOM05D005529 ORTHO05D006800 2.5e-118 429.1 265 80.8
CSS0031927 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 4.2e-118 428.3 265 80.8
ECA232G2783 Erigeron canadensis HOM05D005529 ORTHO05D006800 9.3e-118 427.2 265 78.1
Manes.18G096400 Manihot esculenta HOM05D005529 ORTHO05D006800 2.1e-117 426.0 265 79.6
HanXRQChr11g0320531 Helianthus annuus HOM05D005529 ORTHO05D006800 6.0e-117 424.5 258 78.7
Gohir.A05G247200 Gossypium hirsutum HOM05D005529 ORTHO05D006800 1.0e-116 423.7 265 78.9
Gohir.D05G248700 Gossypium hirsutum HOM05D005529 ORTHO05D006800 1.0e-116 423.7 265 78.9
Gorai.009G259800 Gossypium raimondii HOM05D005529 ORTHO05D006800 1.0e-116 423.7 265 78.9
Nn1g05167 Nelumbo nucifera HOM05D005529 ORTHO05D006800 4.3e-115 418.3 265 78.9
Dinv41017 Davidia involucrata HOM05D005529 ORTHO05D006800 1.1e-113 413.7 238 85.7
ECA247G3042 Erigeron canadensis HOM05D005529 ORTHO05D006800 1.8e-113 412.9 257 77.4
CDE04G0217 Ceratophyllum demersum HOM05D005529 ORTHO05D006800 2.0e-112 409.5 259 77.2
Lsat_1_v5_gn_1_5401 Lactuca sativa HOM05D005529 ORTHO05D006800 1.0e-111 407.1 257 77.4
Cfa018254 Carpinus fangiana HOM05D005529 ORTHO05D006800 1.9e-110 402.9 264 78.4
Lsat_1_v5_gn_9_42620 Lactuca sativa HOM05D005529 ORTHO05D006800 2.5e-110 402.5 261 75.9
ClCG08G007150 Citrullus lanatus HOM05D005529 ORTHO05D006800 9.3e-110 400.6 265 74.7
vmacro21201 Vaccinium macrocarpon HOM05D005529 ORTHO05D006800 2.3e-108 396.0 222 86.5
Os03g0381200 Oryza sativa ssp. japonica HOM05D005529 ORTHO05D006800 4.3e-107 391.7 265 74.3
TAR381G0607 Trochodendron aralioides HOM05D005529 ORTHO05D006800 2.2e-106 389.4 285 72.3
Nn5g28882 Nelumbo nucifera HOM05D005529 ORTHO05D006800 1.2e-104 383.6 258 73.6
Duzib093G1833 Durio zibethinus HOM05D005529 ORTHO05D006800 9.4e-102 374.0 265 71.7
ATR0564G028 Amborella trichopoda HOM05D005529 ORTHO05D006800 3.9e-100 368.6 239 75.3
MELO3C019956.2 Cucumis melo HOM05D005529 ORTHO05D006800 8.8e-100 367.5 265 70.9
Hma1.2p1_0358F.1_g134920 Hydrangea macrophylla HOM05D005529 ORTHO05D006800 2.6e-99 365.9 222 80.2
Lj7C387G8 Lonicera japonica HOM05D005529 ORTHO05D006800 1.5e-96 356.7 257 69.3
TAR625G0192 Trochodendron aralioides HOM05D005529 ORTHO05D006800 1.0e-92 344.0 206 82.5
Mapoly0006s0028 Marchantia polymorpha HOM05D005529 ORTHO05D006800 2.6e-91 339.3 260 65.4
Pp3c1_32040 Physcomitrium patens HOM05D005529 ORTHO05D006800 5.3e-89 331.6 260 64.6
SMO141G0273 Selaginella moellendorffii HOM05D005529 ORTHO05D006800 1.3e-87 327.0 259 64.5
CDE07G0226 Ceratophyllum demersum HOM05D005529 ORTHO05D006800 1.5e-86 323.6 211 74.4
AagrBONN_evm.TU.Sc2ySwM_228.4378 Anthoceros agrestis HOM05D005529 ORTHO05D006800 8.0e-85 317.8 259 64.1
MD10G1039400 Malus domestica HOM05D005529 ORTHO05D006800 5.4e-73 278.5 167 82.0
CARHR290990 Cardamine hirsuta HOM05D005529 ORTHO05D006800 7.7e-72 274.6 154 85.1
Zm00001eb018520 Zea mays HOM05D005529 ORTHO05D006800 3.6e-69 265.8 178 73.6
Ca_10643_v3 Cicer arietinum L. HOM05D005529 ORTHO05D006800 6.6e-63 245.0 142 83.8
Dinv13098 Davidia involucrata HOM05D005529 ORTHO05D006800 1.9e-62 243.4 140 85.0
PRCOL_00004850 Prasinoderma coloniale HOM05D005529 ORTHO05D006800 4.0e-60 235.7 262 49.2
MD10G1040900 Malus domestica HOM05D005529 ORTHO05D006800 2.9e-58 229.6 213 60.6
Haze_27340 Corylus avellana HOM05D005529 ORTHO05D006800 2.4e-57 226.5 256 46.1
Glyma.06G212500 Glycine max HOM05D005529 ORTHO05D006800 1.2e-56 224.2 132 81.8
Actinidia02780 Actinidia chinensis HOM05D005529 ORTHO05D006800 8.3e-50 201.4 120 82.5
CSS0032133 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 8.3e-50 201.4 124 76.6
Glyma.09G074800 Glycine max HOM05D005529 ORTHO05D006800 1.9e-49 200.3 114 85.1
Lsat_1_v5_gn_8_71180 Lactuca sativa HOM05D005529 ORTHO05D006800 2.7e-48 196.4 164 60.4
Rhsim06G0089200 Rhododendron simsii HOM05D005529 ORTHO05D006800 3.5e-48 196.1 104 88.5
Cfa022509 Carpinus fangiana HOM05D005529 ORTHO05D006800 1.0e-47 194.5 280 40.0
Glyma.20G171766 Glycine max HOM05D005529 ORTHO05D006800 2.5e-46 189.9 104 87.5
AUR62022308 Chenopodium quinoa HOM05D005529 ORTHO05D006800 1.1e-44 184.5 265 44.5
BcaC08g46606 Brassica carinata HOM05D005529 ORTHO05D006800 2.2e-42 176.8 104 83.7
Glyma.04G140500 Glycine max HOM05D005529 ORTHO05D006800 1.2e-40 171.0 104 81.7
HPP92_020840 Vanilla planifolia HOM05D005529 ORTHO05D006800 2.1e-40 170.2 104 79.8
Actinidia17753 Actinidia chinensis HOM05D005529 ORTHO05D006800 1.8e-36 157.1 123 68.3
Lsat_1_v5_gn_3_73520 Lactuca sativa HOM05D005529 ORTHO05D006800 3.5e-32 142.9 99 67.7
SalBow7G1408 Salvia bowleyana HOM05D005529 ORTHO05D006800 9.0e-28 128.3 67 91.0
HPP92_020744 Vanilla planifolia HOM05D005529 ORTHO05D006800 1.7e-26 124.0 102 61.8
HPP92_020745 Vanilla planifolia HOM05D005529 ORTHO05D006800 1.1e-20 104.8 104 54.8
MD10G1041000 Malus domestica HOM05D005529 ORTHO05D006800 4.5e-19 99.4 59 79.7
HPP92_020839 Vanilla planifolia HOM05D005529 ORTHO05D006800 6.0e-16 89.0 55 76.4
Glyma.16G101900 Glycine max HOM05D005529 ORTHO05D006800 2.5e-14 83.6 60 71.7
VMungo0464G1177 Vigna mungo HOM05D005529 ORTHO05D006800 3.2e-09 66.6 40 82.5


User provided reference genes

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