Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004533g0030 Nicotiana tabacum HOM05D000963 ORTHO05D005131 3.4e-55 218.0 105 100.0
MBI08_g48228_MAGBIO Magnolia biondii HOM05D000963 ORTHO05D005131 2.6e-31 138.7 84 82.1
PGSC0003DMG400036067 Solanum tuberosum HOM05D000963 ORTHO05D001540 2.6e-31 138.7 84 82.1
EL10As10g23961 Beta vulgaris HOM05D000963 ORTHO05D005131 1.7e-30 136.0 84 81.0
arahy.Tifrunner.gnm1.ann1.LWFR1C Arachis hypogaea HOM05D000963 ORTHO05D005131 2.2e-30 135.6 84 78.6
Sopen10g016560 Solanum pennellii HOM05D000963 ORTHO05D005131 6.5e-30 134.0 79 82.3
Oeu039801.1 Olea europaea HOM05D000963 ORTHO05D005131 2.5e-29 132.1 84 77.4
arahy.Tifrunner.gnm1.ann1.JE53Y0 Arachis hypogaea HOM05D000963 ORTHO05D005131 3.2e-29 131.7 84 78.6
HPP92_028387 Vanilla planifolia HOM05D000963 ORTHO05D005131 9.4e-29 130.2 84 77.4
Migut.D01379 Erythranthe guttata HOM05D000963 ORTHO05D005131 3.6e-28 128.3 73 87.7
BcaNung01517 Brassica carinata HOM05D000963 ORTHO05D005131 2.3e-27 125.6 77 79.2
Migut.D01497 Erythranthe guttata HOM05D000963 ORTHO05D005131 5.2e-27 124.4 73 86.3
VMungo0720G2312 Vigna mungo HOM05D000963 ORTHO05D005131 5.7e-26 120.9 74 78.4
Lsat_1_v5_gn_9_35301 Lactuca sativa HOM05D000963 ORTHO05D005131 2.2e-25 119.0 86 68.6
Gohir.A12G053150 Gossypium hirsutum HOM05D000963 ORTHO05D005131 7.0e-24 114.0 66 83.3
SHI36890 Sapria himalayana HOM05D000963 ORTHO05D005131 1.0e-22 110.2 84 70.2
Gohir.A13G086560 Gossypium hirsutum HOM05D000963 ORTHO05D005131 2.9e-22 108.6 66 80.3
arahy.Tifrunner.gnm1.ann1.J9XL5M Arachis hypogaea HOM05D000963 ORTHO05D005131 1.1e-21 106.7 67 76.1
arahy.Tifrunner.gnm1.ann1.D10MHU Arachis hypogaea HOM05D000963 ORTHO05D005131 4.7e-20 101.3 62 77.4
arahy.Tifrunner.gnm1.ann1.ZFFY2U Arachis hypogaea HOM05D000963 ORTHO05D005131 2.6e-18 95.5 59 76.3
SHI36398 Sapria himalayana HOM05D000963 ORTHO05D005131 2.2e-09 65.9 40 77.5
DCAR_001146 Daucus carota HOM05D000963 ORTHO05D005131 1.1e-08 63.5 40 77.5
DCAR_032037 Daucus carota HOM05D000963 ORTHO05D005131 1.1e-08 63.5 40 77.5
ECA074G0007 Erigeron canadensis HOM05D000963 ORTHO05D004715 1.1e-08 63.5 40 77.5
ECA074G0008 Erigeron canadensis HOM05D000963 ORTHO05D004715 1.1e-08 63.5 40 77.5
ECA169G0003 Erigeron canadensis HOM05D000963 ORTHO05D005131 1.1e-08 63.5 40 77.5
Gohir.D02G117532 Gossypium hirsutum HOM05D000963 ORTHO05D005131 1.1e-08 63.5 40 77.5
Gohir.D03G074448 Gossypium hirsutum HOM05D000963 ORTHO05D005131 1.1e-08 63.5 40 77.5
PGSC0003DMG400018892 Solanum tuberosum HOM05D000963 ORTHO05D005131 1.1e-08 63.5 40 77.5
unitig_8.g4106 Utricularia gibba HOM05D000963 ORTHO05D005131 1.1e-08 63.5 40 77.5
unitig_87.g27920 Utricularia gibba HOM05D000963 ORTHO05D001540 1.1e-08 63.5 40 77.5
arahy.Tifrunner.gnm1.ann1.G70FPN Arachis hypogaea HOM05D000963 ORTHO05D005131 3.1e-08 62.0 36 83.3
C06p23110 Brassica napus HOM05D000963 ORTHO05D005131 3.1e-08 62.0 40 75.0
C09p24700 Brassica napus HOM05D000963 ORTHO05D005131 3.1e-08 62.0 40 75.0
C09p39380 Brassica napus HOM05D000963 ORTHO05D005131 3.1e-08 62.0 40 75.0
BraSC143t45666Z Brassica rapa HOM05D000963 ORTHO05D005131 3.1e-08 62.0 40 75.0
BraSC25t45900Z Brassica rapa HOM05D000963 ORTHO05D005131 3.1e-08 62.0 40 75.0
BraSC59t46558Z Brassica rapa HOM05D000963 ORTHO05D005131 3.1e-08 62.0 40 75.0
Sc05g0002290 Simmondsia chinensis HOM05D000963 ORTHO05D005131 7.0e-08 60.8 39 76.9
Sopen02g009100 Solanum pennellii HOM05D000963 ORTHO05D005131 9.2e-08 60.5 40 75.0
DCAR_018748 Daucus carota HOM05D003334 ORTHO05D004076 1.3e-06 56.6 32 87.5
Gohir.A12G092444 Gossypium hirsutum HOM05D000963 ORTHO05D005131 1.3e-06 56.6 40 72.5
EL10As15g24101 Beta vulgaris HOM05D014900 ORTHO05D018510 3.8e-06 55.1 36 66.7
Gohir.A09G101420 Gossypium hirsutum HOM05D000963 ORTHO05D005131 5.0e-06 54.7 40 67.5
TPR.G33662 Trifolium pratense HOM05D004957 ORTHO05D006741 8.6e-06 53.9 41 68.3


User provided reference genes

Program Settings