Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004532g0030 Nicotiana tabacum HOM05D007456 ORTHO05D009411 4.8e-124 449.1 224 100.0
Nitab4.5_0016432g0010 Nicotiana tabacum HOM05D007456 ORTHO05D009411 3.1e-99 366.7 197 93.4
Sopen10g030890 Solanum pennellii HOM05D007456 ORTHO05D009411 1.2e-79 301.6 197 76.6
PGSC0003DMG400023682 Solanum tuberosum HOM05D007456 ORTHO05D009411 4.0e-78 296.6 197 76.6
Peaxi162Scf00398g00211 Petunia axillaris HOM05D007456 ORTHO05D009411 1.5e-64 251.5 168 77.4
CAN.G128.20 Capsicum annuum HOM05D007456 ORTHO05D009411 3.9e-57 226.9 155 69.7
MSTRG.26940 Avicennia marina HOM05D007456 ORTHO05D009411 4.3e-32 143.7 197 44.2
CsaV3_4G004450 Cucumis sativus L. HOM05D007456 ORTHO05D009411 4.4e-29 133.7 120 60.0
Thecc.05G207800 Theobroma cacao HOM05D007456 ORTHO05D009411 9.9e-29 132.5 116 56.9
FvH4_7g33530 Fragaria vesca HOM05D007456 ORTHO05D009411 1.3e-28 132.1 112 58.9
Gohir.D04G076800 Gossypium hirsutum HOM05D007456 ORTHO05D009411 1.3e-28 132.1 119 57.1
FAN03G3193 Fragaria x ananassa HOM05D007456 ORTHO05D009411 2.2e-28 131.3 118 57.6
ClCG07G017250 Citrullus lanatus HOM05D007456 ORTHO05D009411 2.9e-28 131.0 117 59.0
Sed0026452 Sechium edule HOM05D007456 ORTHO05D009411 1.1e-27 129.0 130 53.1
AUR62005926 Chenopodium quinoa HOM05D007456 ORTHO05D009411 9.3e-27 125.9 118 55.9
vmacro06487 Vaccinium macrocarpon HOM05D007456 ORTHO05D009411 1.6e-26 125.2 114 57.0
Gorai.012G086600 Gossypium raimondii HOM05D007456 ORTHO05D009411 3.5e-26 124.0 114 55.3
FvH4_7g33490 Fragaria vesca HOM05D007456 ORTHO05D009411 4.6e-26 123.6 111 57.7
Gohir.A05G338400 Gossypium hirsutum HOM05D007456 ORTHO05D009411 1.7e-25 121.7 113 54.9
Oeu055445.1 Olea europaea HOM05D007456 ORTHO05D009411 6.6e-25 119.8 107 57.0
EL10Ac3g05110 Beta vulgaris HOM05D007456 ORTHO05D009411 2.5e-24 117.9 118 50.8
TAR375G0715 Trochodendron aralioides HOM05D007456 ORTHO05D009411 4.5e-21 107.1 156 44.2
RcHm_v2.0_Chr1g0383591 Rosa chinensis HOM05D007456 ORTHO05D009411 9.9e-21 105.9 111 53.2
TAR375G0927 Trochodendron aralioides HOM05D007456 ORTHO05D009411 9.9e-21 105.9 156 44.2
BolC4t25953H Brassica oleracea HOM05D007456 ORTHO05D009411 1.7e-20 105.1 160 41.9
BcaC02g09523 Brassica carinata HOM05D007456 ORTHO05D009411 4.9e-20 103.6 160 41.9
C04p43710 Brassica napus HOM05D007456 ORTHO05D009411 1.1e-19 102.4 160 41.2
Lj9A258G53 Lonicera japonica HOM05D007456 ORTHO05D009411 1.9e-19 101.7 146 43.2
Cpa.g.sc252.22 Carica papaya HOM05D007456 ORTHO05D009411 2.4e-19 101.3 122 50.0
Sp7g05790 Schrenkiella parvula HOM05D007456 ORTHO05D009411 2.4e-19 101.3 130 44.6
BcaB06g27033 Brassica carinata HOM05D007456 ORTHO05D009411 4.2e-19 100.5 131 46.6
AL7G45310 Arabidopsis lyrata HOM05D007456 ORTHO05D009411 1.2e-18 99.0 129 43.4
A04p10240 Brassica napus HOM05D007456 ORTHO05D009411 6.0e-18 96.7 130 44.6
BraA04t16690Z Brassica rapa HOM05D007456 ORTHO05D009411 6.0e-18 96.7 130 44.6
Thhalv10004016m.g Eutrema salsugineum HOM05D007456 ORTHO05D009411 6.0e-18 96.7 133 42.1
GSVIVG01024456001 Vitis vinifera HOM05D007456 ORTHO05D009411 3.0e-17 94.4 128 43.0
FAN19G0065 Fragaria x ananassa HOM05D007456 ORTHO05D009411 5.1e-17 93.6 93 54.8
THA.LOC104823813 Tarenaya hassleriana HOM05D007456 ORTHO05D009411 1.1e-16 92.4 121 42.1
Nn1g09307 Nelumbo nucifera HOM05D007456 ORTHO05D009411 1.5e-16 92.0 94 53.2
Dinv11972 Davidia involucrata HOM05D007456 ORTHO05D009411 3.3e-16 90.9 145 42.1
Rhsim01G0125300 Rhododendron simsii HOM05D007456 ORTHO05D009411 1.6e-15 88.6 137 40.1
Atru.BG.267.p Acer truncatum HOM05D007456 ORTHO05D009411 2.1e-15 88.2 79 57.0
Migut.F00108 Erythranthe guttata HOM05D007456 ORTHO05D009411 4.8e-15 87.0 142 39.4
Hma1.2p1_0758F.1_g213530 Hydrangea macrophylla HOM05D007456 ORTHO05D009411 4.8e-15 87.0 59 71.2
Lsat_1_v5_gn_4_134121 Lactuca sativa HOM05D007456 ORTHO05D009411 4.8e-15 87.0 86 57.0
Actinidia08731 Actinidia chinensis HOM05D007456 ORTHO05D009411 8.1e-15 86.3 123 41.5
QL09p026466 Quercus lobata HOM05D007456 ORTHO05D009411 1.1e-14 85.9 64 59.4
QL09p026540 Quercus lobata HOM05D007456 ORTHO05D009411 1.1e-14 85.9 64 59.4
CSS0006842 Camellia sinensis var. sinensis HOM05D007456 ORTHO05D009411 1.4e-14 85.5 64 67.2
Aqoxy3G00913 Aquilegia oxysepala HOM05D007456 ORTHO05D009411 3.1e-14 84.3 109 40.4
HanXRQChr09g0260511 Helianthus annuus HOM05D007456 ORTHO05D009411 5.8e-13 80.1 83 54.2
Glyma.01G230600 Glycine max HOM05D007456 ORTHO05D009411 7.6e-13 79.7 65 60.0
FAN10G0306 Fragaria x ananassa HOM05D007456 ORTHO05D009411 1.0e-12 79.3 61 62.3
FAN10G3274 Fragaria x ananassa HOM05D007456 ORTHO05D009411 1.0e-12 79.3 61 62.3
Glyma.11G013600 Glycine max HOM05D007456 ORTHO05D009411 1.3e-12 79.0 63 61.9
FvH4_1g26290 Fragaria vesca HOM05D000003 ORTHO05D010713 1.7e-12 78.6 64 59.4
BcaC02g09522 Brassica carinata HOM05D007456 ORTHO05D009411 2.2e-12 78.2 95 48.4
Cc11_g03880 Coffea canephora HOM05D007456 ORTHO05D009411 2.9e-12 77.8 91 49.5
CiPaw.06G020600 Carya illinoinensis HOM05D007456 ORTHO05D009411 8.4e-12 76.3 55 63.6
Solyc10g080330.2 Solanum lycopersicum HOM05D007456 ORTHO05D009411 5.5e-11 73.6 46 69.6
Ah.07g203680 Amaranthus hybridus HOM05D007456 ORTHO05D009411 9.3e-11 72.8 82 50.0
Lj1C1032G4 Lonicera japonica HOM05D007456 ORTHO05D009411 9.3e-11 72.8 53 66.0
RcHm_v2.0_Chr1g0383651 Rosa chinensis HOM05D007456 ORTHO05D009411 3.5e-10 70.9 104 42.3
AUR62018885 Chenopodium quinoa HOM05D007456 ORTHO05D009411 7.9e-10 69.7 67 50.7
SalBow4G3145 Salvia bowleyana HOM05D007456 ORTHO05D009411 7.9e-10 69.7 53 62.3
PGR142G2334 Punica granatum HOM05D007456 ORTHO05D009411 1.0e-09 69.3 63 57.1
Sc19g0000290 Simmondsia chinensis HOM05D007456 ORTHO05D009411 3.0e-09 67.8 146 33.6
CDE02G0006 Ceratophyllum demersum HOM05D007456 ORTHO05D009411 6.7e-09 66.6 48 66.7
FAN20G2687 Fragaria x ananassa HOM05D000148 ORTHO05D008179 6.7e-09 66.6 130 29.2
MBI13_g23885_MAGBIO Magnolia biondii HOM05D007456 ORTHO05D009411 1.1e-08 65.9 61 55.7
Oeu026572.1 Olea europaea HOM05D007456 ORTHO05D009411 1.1e-08 65.9 87 44.8
CDE02G0352 Ceratophyllum demersum HOM05D007456 ORTHO05D009411 1.5e-08 65.5 48 64.6
Haze_00583 Corylus avellana HOM05D007456 ORTHO05D009411 3.3e-08 64.3 45 64.4
Manes.08G164911 Manihot esculenta HOM05D007456 ORTHO05D009411 9.6e-08 62.8 52 57.7
Atru.chr13.134 Acer truncatum HOM05D006705 ORTHO05D008179 1.3e-07 62.4 85 35.3
Cfa015911 Carpinus fangiana HOM05D007456 ORTHO05D009411 1.6e-07 62.0 52 57.7
FAN01G1025 Fragaria x ananassa HOM05D007456 ORTHO05D009411 1.6e-07 62.0 99 38.4
DCAR_010527 Daucus carota HOM05D006163 ORTHO05D007625 2.8e-07 61.2 59 47.5
ECA232G0132 Erigeron canadensis HOM05D006705 ORTHO05D008179 4.8e-07 60.5 105 32.4
SGA_v2.0_scaffold44G16881 Striga asiatica HOM05D007456 ORTHO05D009411 6.3e-07 60.1 60 50.0
CDE02G1751 Ceratophyllum demersum HOM05D006705 ORTHO05D008179 1.4e-06 58.9 82 39.0
MBI08_g41522_MAGBIO Magnolia biondii HOM05D006705 ORTHO05D008179 2.4e-06 58.2 177 24.3
Ciclev10011504m.g Citrus clementina HOM05D007456 ORTHO05D009411 5.3e-06 57.0 48 56.2


User provided reference genes

Program Settings