Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004530g0050 Nicotiana tabacum HOM05D005286 ORTHO05D006348 5.7e-98 360.9 183 100.0
Nitab4.5_0000432g0040 Nicotiana tabacum HOM05D005286 ORTHO05D006348 8.9e-75 283.9 161 92.5
Nitab4.5_0000954g0020 Nicotiana tabacum HOM05D005286 ORTHO05D006348 1.2e-74 283.5 160 91.9
Peaxi162Scf00151g00811 Petunia axillaris HOM05D005286 ORTHO05D006348 1.9e-56 223.0 194 65.5
PGSC0003DMG400045338 Solanum tuberosum HOM05D005286 ORTHO05D006348 2.7e-55 219.2 172 70.3
Nitab4.5_0008592g0010 Nicotiana tabacum HOM05D005286 ORTHO05D006348 3.4e-50 202.2 125 84.8
Solyc12g088020.1 Solanum lycopersicum HOM05D005286 ORTHO05D006348 3.4e-50 202.2 172 65.7
Sopen12g030050 Solanum pennellii HOM05D005286 ORTHO05D006348 1.3e-49 200.3 172 65.7
CAN.G1104.7 Capsicum annuum HOM05D005286 ORTHO05D006348 4.6e-47 191.8 166 61.4
CSS0034769 Camellia sinensis var. sinensis HOM05D005286 ORTHO05D006348 2.8e-44 182.6 177 57.1
Dinv24565 Davidia involucrata HOM05D005286 ORTHO05D006348 2.8e-44 182.6 163 60.7
CSS0004303 Camellia sinensis var. sinensis HOM05D005286 ORTHO05D006348 8.1e-44 181.0 142 65.5
CSS0038762 Camellia sinensis var. sinensis HOM05D005286 ORTHO05D006348 8.1e-44 181.0 142 65.5
Rhsim08G0000400 Rhododendron simsii HOM05D005286 ORTHO05D006348 4.4e-42 175.3 171 59.1
Oeu037874.1 Olea europaea HOM05D005286 ORTHO05D006348 5.8e-42 174.9 156 62.2
vmacro18685 Vaccinium macrocarpon HOM05D005286 ORTHO05D006348 7.6e-42 174.5 172 58.7
Actinidia16523 Actinidia chinensis HOM05D005286 ORTHO05D006348 9.9e-42 174.1 174 58.0
Cc07_g21020 Coffea canephora HOM05D005286 ORTHO05D006348 9.9e-42 174.1 162 63.6
CSS0007937 Camellia sinensis var. sinensis HOM05D005286 ORTHO05D006348 1.3e-41 173.7 168 56.0
Lj4A421T8 Lonicera japonica HOM05D005286 ORTHO05D006348 2.9e-41 172.6 165 60.6
Manes.12G159000 Manihot esculenta HOM05D005286 ORTHO05D006348 3.8e-41 172.2 147 65.3
DCAR_019994 Daucus carota HOM05D005286 ORTHO05D006348 4.9e-41 171.8 153 59.5
HanXRQChr01g0017141 Helianthus annuus HOM05D005286 ORTHO05D006348 1.1e-40 170.6 145 63.4
Lsat_1_v5_gn_1_78000 Lactuca sativa HOM05D005286 ORTHO05D006348 1.4e-40 170.2 167 61.1
Duzib147G1331 Durio zibethinus HOM05D005286 ORTHO05D006348 2.4e-40 169.5 152 61.8
MSTRG.23499 Avicennia marina HOM05D005286 ORTHO05D006348 5.4e-40 168.3 172 57.0
CiPaw.03G118000 Carya illinoinensis HOM05D005286 ORTHO05D006348 1.2e-39 167.2 139 63.3
SGA_v2.0_scaffold189G40378 Striga asiatica HOM05D005286 ORTHO05D006348 1.2e-39 167.2 177 54.2
Thecc.01G137300 Theobroma cacao HOM05D005286 ORTHO05D006348 1.6e-39 166.8 147 61.2
Nitab4.5_0008217g0010 Nicotiana tabacum HOM05D005286 ORTHO05D006348 2.1e-39 166.4 102 80.4
RcHm_v2.0_Chr2g0122521 Rosa chinensis HOM05D005286 ORTHO05D006348 2.7e-39 166.0 143 59.4
GSVIVG01022340001 Vitis vinifera HOM05D005286 ORTHO05D006348 2.7e-39 166.0 156 56.4
MD15G1135000 Malus domestica HOM05D005286 ORTHO05D006348 3.5e-39 165.6 148 60.8
TAR625G0087 Trochodendron aralioides HOM05D005286 ORTHO05D006348 3.5e-39 165.6 150 57.3
QL10p041275 Quercus lobata HOM05D005286 ORTHO05D006348 7.8e-39 164.5 145 60.7
Atru.chr4.988 Acer truncatum HOM05D005286 ORTHO05D006348 1.0e-38 164.1 154 60.4
TWI75G1712 Tripterygium wilfordii HOM05D005286 ORTHO05D006348 1.0e-38 164.1 143 60.8
FvH4_1g24860 Fragaria vesca HOM05D005286 ORTHO05D006348 1.3e-38 163.7 162 58.0
FAN19G2916 Fragaria x ananassa HOM05D005286 ORTHO05D006348 1.3e-38 163.7 162 58.0
Nn1g08960 Nelumbo nucifera HOM05D005286 ORTHO05D006348 1.3e-38 163.7 147 59.2
FAN23G2334 Fragaria x ananassa HOM05D005286 ORTHO05D006348 3.0e-38 162.5 162 57.4
Prupe.4G274700 Prunus persica HOM05D005286 ORTHO05D006348 5.1e-38 161.8 143 59.4
FAN28G1250 Fragaria x ananassa HOM05D005286 ORTHO05D006348 8.7e-38 161.0 158 58.9
Hma1.2p1_3117F.1_g332810 Hydrangea macrophylla HOM05D005286 ORTHO05D006348 1.1e-37 160.6 154 58.4
Migut.H00797 Erythranthe guttata HOM05D005286 ORTHO05D006348 1.5e-37 160.2 144 61.8
Gorai.008G094500 Gossypium raimondii HOM05D005286 ORTHO05D006348 1.5e-37 160.2 159 57.2
FAN26G1990 Fragaria x ananassa HOM05D005286 ORTHO05D006348 2.5e-37 159.5 162 56.8
CANSAT35G0194 Cannabis sativa HOM05D005286 ORTHO05D006348 5.6e-37 158.3 162 54.3
Gohir.A12G085400 Gossypium hirsutum HOM05D005286 ORTHO05D006348 5.6e-37 158.3 147 59.2
Gohir.D12G083400 Gossypium hirsutum HOM05D005286 ORTHO05D006348 9.6e-37 157.5 155 57.4
Gohir.D12G083401 Gossypium hirsutum HOM05D005286 ORTHO05D006348 9.6e-37 157.5 155 57.4
AL8G41150 Arabidopsis lyrata HOM05D005286 ORTHO05D006348 1.6e-36 156.8 150 54.7
QL10p041267 Quercus lobata HOM05D005286 ORTHO05D006348 1.6e-36 156.8 147 57.8
Sp2g26980 Schrenkiella parvula HOM05D005286 ORTHO05D006348 1.6e-36 156.8 149 53.7
Ciclev10000962m.g Citrus clementina HOM05D005286 ORTHO05D006348 2.1e-36 156.4 144 58.3
Cfa021278 Carpinus fangiana HOM05D005286 ORTHO05D006348 2.8e-36 156.0 155 56.1
COL.COLO4_35813 Corchorus olitorius HOM05D005286 ORTHO05D006348 2.8e-36 156.0 149 57.0
Duzib187G0999 Durio zibethinus HOM05D005286 ORTHO05D006348 3.6e-36 155.6 155 56.1
Nn5g28436 Nelumbo nucifera HOM05D005286 ORTHO05D006348 3.6e-36 155.6 143 56.6
Thhalv10004131m.g Eutrema salsugineum HOM05D005286 ORTHO05D006348 4.8e-36 155.2 149 54.4
THA.LOC104819345 Tarenaya hassleriana HOM05D005286 ORTHO05D006348 6.2e-36 154.8 146 56.8
Carub.0008s2471 Capsella rubella HOM05D005286 ORTHO05D006348 1.1e-35 154.1 149 52.3
ECA248G0233 Erigeron canadensis HOM05D005286 ORTHO05D006348 1.1e-35 154.1 169 53.3
A06p30530 Brassica napus HOM05D005286 ORTHO05D006348 1.4e-35 153.7 180 49.4
BraA06t26002Z Brassica rapa HOM05D005286 ORTHO05D006348 1.4e-35 153.7 180 49.4
Medtr3g096675 Medicago truncatula HOM05D005286 ORTHO05D006348 2.4e-35 152.9 149 57.7
THA.LOC104818420 Tarenaya hassleriana HOM05D005286 ORTHO05D006348 3.1e-35 152.5 172 50.0
unitig_748.g8003 Utricularia gibba HOM05D005286 ORTHO05D006348 3.1e-35 152.5 161 54.7
ClCG04G002290 Citrullus lanatus HOM05D005286 ORTHO05D006348 4.0e-35 152.1 145 56.6
MELO3C008897.2 Cucumis melo HOM05D005286 ORTHO05D006348 4.0e-35 152.1 145 57.9
TPR.G33580 Trifolium pratense HOM05D005286 ORTHO05D006348 4.0e-35 152.1 150 59.3
Aa31LG1G17980 Aethionema arabicum HOM05D005286 ORTHO05D006348 5.3e-35 151.8 150 53.3
BcaB02g09762 Brassica carinata HOM05D005286 ORTHO05D006348 5.3e-35 151.8 172 51.2
Lj1g0003788 Lotus japonicus HOM05D003519 ORTHO05D004443 5.3e-35 151.8 149 59.1
Glyma.06G155750 Glycine max HOM05D005286 ORTHO05D006348 6.9e-35 151.4 154 55.8
Hund21799 Selenicereus undatus HOM05D005286 ORTHO05D006348 6.9e-35 151.4 160 51.9
C03p62500 Brassica napus HOM05D005286 ORTHO05D006348 1.2e-34 150.6 149 55.0
BolC3t18507H Brassica oleracea HOM05D005286 ORTHO05D006348 1.2e-34 150.6 149 55.0
Psat5g059680 Pisum sativum HOM05D005286 ORTHO05D006348 1.2e-34 150.6 152 58.6
Potri.007G101600 Populus trichocarpa HOM05D005286 ORTHO05D006348 1.2e-34 150.6 139 61.2
arahy.Tifrunner.gnm1.ann1.7K8RK5 Arachis hypogaea HOM05D005286 ORTHO05D006348 1.5e-34 150.2 155 56.1
CARHR277830 Cardamine hirsuta HOM05D005286 ORTHO05D006348 1.5e-34 150.2 150 54.0
Eucgr.I00123 Eucalyptus grandis HOM05D005286 ORTHO05D006348 2.0e-34 149.8 171 49.1
AT5G63910 Arabidopsis thaliana HOM05D005286 ORTHO05D006348 3.4e-34 149.1 149 51.7
arahy.Tifrunner.gnm1.ann1.ZN9YLD Arachis hypogaea HOM05D005286 ORTHO05D006348 3.4e-34 149.1 153 55.6
Phvul.009G154600 Phaseolus vulgaris HOM05D005286 ORTHO05D006348 3.4e-34 149.1 150 56.0
Ah.06g191030 Amaranthus hybridus HOM05D005286 ORTHO05D006348 4.5e-34 148.7 145 56.6
Ca_16981_v3 Cicer arietinum L. HOM05D005286 ORTHO05D006348 4.5e-34 148.7 171 53.2
PGR119G0364 Punica granatum HOM05D005286 ORTHO05D006348 5.8e-34 148.3 167 52.7
Sabra07G0083800 Salix brachista HOM05D005286 ORTHO05D006348 5.8e-34 148.3 139 59.0
Sed0025698 Sechium edule HOM05D005286 ORTHO05D006348 5.8e-34 148.3 144 58.3
Sc09g0002230 Simmondsia chinensis HOM05D005286 ORTHO05D006348 5.8e-34 148.3 156 52.6
CSS0025452 Camellia sinensis var. sinensis HOM05D005286 ORTHO05D006348 7.6e-34 147.9 167 50.3
BcaC01g02644 Brassica carinata HOM05D005286 ORTHO05D006348 9.9e-34 147.5 179 48.6
ATR0138G018 Amborella trichopoda HOM05D005286 ORTHO05D006348 1.3e-33 147.1 148 56.8
CsaV3_4G030380 Cucumis sativus L. HOM05D005286 ORTHO05D006348 1.3e-33 147.1 145 56.6
Lalb_Chr23g0272691 Lupinus albus HOM05D005286 ORTHO05D006348 1.3e-33 147.1 155 56.1
MBI06_g35210_MAGBIO Magnolia biondii HOM05D005286 ORTHO05D006348 1.3e-33 147.1 150 52.7
EL10Ac4g09623 Beta vulgaris HOM05D005286 ORTHO05D006348 1.7e-33 146.7 162 52.5
Nitab4.5_0005379g0060 Nicotiana tabacum HOM05D005286 ORTHO05D006348 6.4e-33 144.8 113 71.7
Potri.007G101700 Populus trichocarpa HOM05D005286 ORTHO05D006348 6.4e-33 144.8 139 56.8
VMungo1309G1016 Vigna mungo HOM05D005286 ORTHO05D006348 1.1e-32 144.1 152 52.6
Aqoxy5G02419 Aquilegia oxysepala HOM05D005286 ORTHO05D006348 4.2e-32 142.1 177 50.8
Hund07236 Selenicereus undatus HOM05D005286 ORTHO05D006348 1.2e-31 140.6 166 50.0
CDE08G1426 Ceratophyllum demersum HOM05D005286 ORTHO05D006348 7.9e-31 137.9 152 48.0
PSO170G0528 Papaver somniferum HOM05D005286 ORTHO05D006348 3.9e-30 135.6 170 44.7
SEGI_37681 Sequoiadendron giganteum HOM05D005286 ORTHO05D006348 7.4e-29 131.3 163 44.2
RcHm_v2.0_Chr6g0261231 Rosa chinensis HOM05D005286 ORTHO05D006348 9.6e-29 131.0 107 60.7
Nitab4.5_0002142g0070 Nicotiana tabacum HOM05D005286 ORTHO05D006348 9.0e-27 124.4 87 75.9
CSS0028284 Camellia sinensis var. sinensis HOM05D005286 ORTHO05D006348 2.0e-26 123.2 97 60.8
CSS0025385 Camellia sinensis var. sinensis HOM05D005286 ORTHO05D006348 1.7e-25 120.2 171 43.9
Cpa.g.sc37.6 Carica papaya HOM05D005286 ORTHO05D006348 6.4e-25 118.2 98 61.2
AagrBONN_evm.TU.Sc2ySwM_362.2029 Anthoceros agrestis HOM05D005286 ORTHO05D006348 1.4e-24 117.1 135 47.4
HPP92_011629 Vanilla planifolia HOM05D005286 ORTHO05D006348 1.2e-23 114.0 169 42.6
Pp3c3_10560 Physcomitrium patens HOM05D005286 ORTHO05D006348 2.1e-23 113.2 158 38.0
SMO119G0327 Selaginella moellendorffii HOM05D005286 ORTHO05D006348 6.0e-23 111.7 165 40.6
Os04g0692800 Oryza sativa ssp. japonica HOM05D005286 ORTHO05D006348 2.3e-22 109.8 139 43.2
Zm00001eb434510 Zea mays HOM05D005286 ORTHO05D006348 5.6e-21 105.1 165 40.0
AUR62000514 Chenopodium quinoa HOM05D005286 ORTHO05D006348 6.9e-19 98.2 97 52.6
AUR62006858 Chenopodium quinoa HOM05D005286 ORTHO05D006348 2.6e-18 96.3 97 52.6
Mapoly0032s0088 Marchantia polymorpha HOM05D005286 ORTHO05D006348 2.9e-17 92.8 153 37.3
Peaxi162Scf00151g00815 Petunia axillaris HOM05D005286 ORTHO05D006348 1.9e-13 80.1 74 56.8
Oeu039336.1 Olea europaea HOM05D001574 ORTHO05D006348 8.2e-12 74.7 54 63.0
CBR_g8549 Chara braunii HOM05D005286 ORTHO05D006348 2.9e-09 66.2 148 35.8
Peaxi162Scf00151g00817 Petunia axillaris HOM05D005286 ORTHO05D006348 1.4e-08 63.9 45 71.1
Haze_10873 Corylus avellana HOM05D005286 ORTHO05D006348 2.5e-08 63.2 61 52.5
Sabra07G0083900 Salix brachista HOM05D005286 ORTHO05D006348 7.9e-07 58.2 74 48.6


User provided reference genes

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