Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004524g0050 Nicotiana tabacum HOM05D005467 ORTHO05D006523 3.1e-66 255.0 127 100.0
Peaxi162Scf00205g00928 Petunia axillaris HOM05D005467 ORTHO05D006523 2.4e-55 218.8 116 90.5
CAN.G1489.4 Capsicum annuum HOM05D005467 ORTHO05D006523 4.7e-51 204.5 116 86.2
Sopen05g004250 Solanum pennellii HOM05D005467 ORTHO05D006523 2.0e-49 199.1 116 84.5
Nitab4.5_0000350g0200 Nicotiana tabacum HOM05D005467 ORTHO05D006523 2.6e-49 198.7 103 94.2
Solyc05g008420.4 Solanum lycopersicum HOM05D005467 ORTHO05D006523 1.1e-44 183.3 108 85.2
Cfa008565 Carpinus fangiana HOM05D005467 ORTHO05D006523 1.4e-42 176.4 116 68.1
CSS0047900 Camellia sinensis var. sinensis HOM05D005467 ORTHO05D006523 2.4e-42 175.6 125 71.2
GSVIVG01011792001 Vitis vinifera HOM05D005467 ORTHO05D006523 5.3e-42 174.5 116 69.8
Potri.010G116200 Populus trichocarpa HOM05D005467 ORTHO05D006523 2.6e-41 172.2 125 67.2
Prupe.1G321400 Prunus persica HOM05D005467 ORTHO05D006523 2.6e-41 172.2 125 65.6
Migut.L00653 Erythranthe guttata HOM05D005467 ORTHO05D006523 4.5e-41 171.4 116 67.2
Migut.L00826 Erythranthe guttata HOM05D005467 ORTHO05D006523 4.5e-41 171.4 116 67.2
Thecc.02G211500 Theobroma cacao HOM05D005467 ORTHO05D006523 1.3e-40 169.9 116 65.5
Actinidia14942 Actinidia chinensis HOM05D005467 ORTHO05D006523 1.7e-40 169.5 125 68.0
ClCG05G022280 Citrullus lanatus HOM05D005467 ORTHO05D006523 2.2e-40 169.1 113 68.1
Sabra10G0087600 Salix brachista HOM05D005467 ORTHO05D006523 2.2e-40 169.1 116 68.1
FAN07G0694 Fragaria x ananassa HOM05D005467 ORTHO05D006523 3.8e-40 168.3 116 65.5
Ciclev10015390m.g Citrus clementina HOM05D005467 ORTHO05D006523 6.4e-40 167.5 125 64.8
Lj6C750G3 Lonicera japonica HOM05D005467 ORTHO05D006523 8.4e-40 167.2 118 65.3
Sabra10G0086000 Salix brachista HOM05D005467 ORTHO05D006523 8.4e-40 167.2 116 67.2
TWI31G0476 Tripterygium wilfordii HOM05D005467 ORTHO05D006523 1.4e-39 166.4 125 62.4
PGR119G0286 Punica granatum HOM05D005467 ORTHO05D006523 1.9e-39 166.0 118 62.7
Lj5g0001822 Lotus japonicus HOM05D005467 ORTHO05D006523 2.4e-39 165.6 125 64.8
MD16G1031500 Malus domestica HOM05D005467 ORTHO05D006523 2.4e-39 165.6 116 63.8
FvH4_4g26200 Fragaria vesca HOM05D005467 ORTHO05D006523 3.2e-39 165.2 116 64.7
FAN17G2566 Fragaria x ananassa HOM05D005467 ORTHO05D006523 4.2e-39 164.9 119 63.9
Sed0008724 Sechium edule HOM05D005467 ORTHO05D006523 4.2e-39 164.9 120 61.7
RcHm_v2.0_Chr4g0433781 Rosa chinensis HOM05D005467 ORTHO05D006523 7.1e-39 164.1 116 64.7
Duzib248G1088 Durio zibethinus HOM05D005467 ORTHO05D006523 9.3e-39 163.7 117 64.1
Hma1.2p1_0114F.1_g055340 Hydrangea macrophylla HOM05D005467 ORTHO05D006523 1.2e-38 163.3 116 64.7
Manes.06G062500 Manihot esculenta HOM05D005467 ORTHO05D006523 1.2e-38 163.3 125 60.8
CANSAT01G3134 Cannabis sativa HOM05D005467 ORTHO05D006523 1.6e-38 162.9 117 65.0
Glyma.10G266400 Glycine max HOM05D005467 ORTHO05D006523 2.1e-38 162.5 128 59.4
arahy.Tifrunner.gnm1.ann1.F0PHAM Arachis hypogaea HOM05D005467 ORTHO05D006523 2.7e-38 162.2 125 61.6
arahy.Tifrunner.gnm1.ann1.U1J3BU Arachis hypogaea HOM05D005467 ORTHO05D006523 2.7e-38 162.2 125 61.6
Gohir.D04G138566 Gossypium hirsutum HOM05D005467 ORTHO05D006523 2.7e-38 162.2 117 63.2
Gorai.012G123600 Gossypium raimondii HOM05D005467 ORTHO05D006523 2.7e-38 162.2 117 63.2
Cc11_g09130 Coffea canephora HOM05D005467 ORTHO05D006523 7.9e-38 160.6 116 62.9
CsaV3_5G034840 Cucumis sativus L. HOM05D005467 ORTHO05D006523 7.9e-38 160.6 113 65.5
ECA246G2902 Erigeron canadensis HOM05D005467 ORTHO05D006523 7.9e-38 160.6 125 60.8
DCAR_007277 Daucus carota HOM05D005467 ORTHO05D006523 1.0e-37 160.2 125 58.4
CiPaw.05G246600 Carya illinoinensis HOM05D005467 ORTHO05D006523 1.8e-37 159.5 114 64.0
TAR629G1677 Trochodendron aralioides HOM05D005467 ORTHO05D006523 3.9e-37 158.3 116 64.7
Aqoxy3G00153 Aquilegia oxysepala HOM05D005467 ORTHO05D006523 5.1e-37 157.9 117 59.8
HanXRQChr15g0477671 Helianthus annuus HOM05D005467 ORTHO05D006523 6.7e-37 157.5 116 62.1
Lalb_Chr21g0308561 Lupinus albus HOM05D005467 ORTHO05D006523 1.1e-36 156.8 113 63.7
Medtr1g108650 Medicago truncatula HOM05D005467 ORTHO05D006523 1.1e-36 156.8 112 63.4
Gohir.A04G099200 Gossypium hirsutum HOM05D005467 ORTHO05D006523 1.5e-36 156.4 117 61.5
Glyma.20G124100 Glycine max HOM05D005467 ORTHO05D006523 1.9e-36 156.0 126 59.5
Nn3g18021 Nelumbo nucifera HOM05D005467 ORTHO05D006523 3.3e-36 155.2 114 62.3
Cpa.g.sc65.104 Carica papaya HOM05D005467 ORTHO05D006523 4.3e-36 154.8 123 64.2
VMungo0720G1946 Vigna mungo HOM05D005467 ORTHO05D006523 4.3e-36 154.8 128 56.2
MBI10_g46301_MAGBIO Magnolia biondii HOM05D005467 ORTHO05D006523 5.6e-36 154.5 113 60.2
Phvul.007G035400 Phaseolus vulgaris HOM05D005467 ORTHO05D006523 5.6e-36 154.5 128 57.8
TPR.G4835 Trifolium pratense HOM05D005467 ORTHO05D006523 5.6e-36 154.5 113 61.9
Eucgr.G02222 Eucalyptus grandis HOM05D005467 ORTHO05D006523 3.7e-35 151.8 113 61.1
Psat6g222960 Pisum sativum HOM05D005467 ORTHO05D006523 3.7e-35 151.8 128 57.8
Rhsim09G0101300 Rhododendron simsii HOM05D005467 ORTHO05D006523 3.7e-35 151.8 135 58.5
SGA_v2.0_scaffold50G18532 Striga asiatica HOM05D005467 ORTHO05D006523 6.2e-35 151.0 147 52.4
Lsat_1_v5_gn_3_54101 Lactuca sativa HOM05D005467 ORTHO05D006523 1.1e-34 150.2 125 58.4
AUR62014129 Chenopodium quinoa HOM05D005467 ORTHO05D006523 1.4e-34 149.8 114 61.4
Nitab4.5_0000293g0010 Nicotiana tabacum HOM05D005467 ORTHO05D006523 1.8e-34 149.4 114 61.4
Nitab4.5_0000350g0270 Nicotiana tabacum HOM05D005467 ORTHO05D006523 3.1e-34 148.7 114 59.6
Os01g0506200 Oryza sativa ssp. japonica HOM05D005467 ORTHO05D006523 3.1e-34 148.7 116 52.6
AUR62039552 Chenopodium quinoa HOM05D005467 ORTHO05D006523 4.0e-34 148.3 111 60.4
Peaxi162Scf00159g00824 Petunia axillaris HOM05D005467 ORTHO05D006523 4.0e-34 148.3 124 58.9
PGSC0003DMG400029189 Solanum tuberosum HOM05D005467 ORTHO05D006523 4.0e-34 148.3 119 59.7
Peaxi162Scf00159g00823 Petunia axillaris HOM05D005467 ORTHO05D006523 1.2e-33 146.7 124 59.7
Ah.02g128100 Amaranthus hybridus HOM05D005467 ORTHO05D006523 1.5e-33 146.4 122 56.6
HPP92_008650 Vanilla planifolia HOM05D005467 ORTHO05D006523 7.6e-33 144.1 113 54.9
PSO782G0553 Papaver somniferum HOM05D005467 ORTHO05D006523 2.2e-32 142.5 116 52.6
PSO063G5439 Papaver somniferum HOM05D005467 ORTHO05D006523 8.4e-32 140.6 116 51.7
PGSC0003DMG400029188 Solanum tuberosum HOM05D005467 ORTHO05D006523 1.4e-31 139.8 114 58.8
unitig_21.g20024 Utricularia gibba HOM05D000903 ORTHO05D000731 2.4e-31 139.0 125 52.8
Ca_11108_v3 Cicer arietinum L. HOM05D005467 ORTHO05D006523 4.2e-31 138.3 114 57.9
Sopen02g012010 Solanum pennellii HOM05D005467 ORTHO05D006523 7.1e-31 137.5 114 55.3
Nitab4.5_0002820g0080 Nicotiana tabacum HOM05D005467 ORTHO05D006523 1.2e-30 136.7 127 54.3
Nitab4.5_0004367g0150 Nicotiana tabacum HOM05D005467 ORTHO05D006523 1.6e-30 136.3 126 54.0
Solyc02g038670.3 Solanum lycopersicum HOM05D005467 ORTHO05D006523 3.5e-30 135.2 114 54.4
Sopen02g012000 Solanum pennellii HOM05D005467 ORTHO05D006523 3.5e-30 135.2 117 55.6
Solyc02g038680.1 Solanum lycopersicum HOM05D005467 ORTHO05D006523 1.8e-29 132.9 115 53.9
PGSC0003DMG400017873 Solanum tuberosum HOM05D005467 ORTHO05D006523 6.7e-29 131.0 115 53.9
QL01p002615 Quercus lobata HOM05D005467 ORTHO05D006523 1.9e-28 129.4 207 38.2
Sopen02g012020 Solanum pennellii HOM05D005467 ORTHO05D006523 7.4e-28 127.5 114 51.8
Solyc02g038650.1 Solanum lycopersicum HOM05D005467 ORTHO05D006523 1.4e-26 123.2 116 51.7
Atru.chr11.358 Acer truncatum HOM05D005467 ORTHO05D006523 5.3e-26 121.3 83 63.9
Zm00001eb341680 Zea mays HOM05D005467 ORTHO05D006523 6.9e-26 120.9 152 38.8
PGSC0003DMG400023165 Solanum tuberosum HOM05D005467 ORTHO05D006523 9.0e-26 120.6 108 53.7
TAR622G1271 Trochodendron aralioides HOM05D005467 ORTHO05D006523 1.0e-24 117.1 99 58.6
vmacro10622 Vaccinium macrocarpon HOM05D005467 ORTHO05D006523 1.3e-24 116.7 77 71.4
FAN12G1869 Fragaria x ananassa HOM05D005467 ORTHO05D006523 1.4e-23 113.2 116 50.0
FAN12G3855 Fragaria x ananassa HOM05D005467 ORTHO05D006523 1.4e-23 113.2 116 50.0
Sopen02g012080 Solanum pennellii HOM05D005467 ORTHO05D006523 5.5e-23 111.3 108 49.1
Hund24998 Selenicereus undatus HOM05D005467 ORTHO05D006523 1.6e-22 109.8 116 47.4
Peaxi162Scf00205g00812 Petunia axillaris HOM05D005467 ORTHO05D006523 1.5e-20 103.2 119 48.7
ATR0041G011 Amborella trichopoda HOM05D005467 ORTHO05D006523 1.6e-19 99.8 124 41.1
Pp3c22_2590 Physcomitrium patens HOM05D005467 ORTHO05D006523 4.8e-19 98.2 103 39.8
SMO172G0164 Selaginella moellendorffii HOM05D005467 ORTHO05D006523 1.1e-18 97.1 113 41.6
CBR_g17592 Chara braunii HOM05D005467 ORTHO05D006523 1.2e-17 93.6 127 40.2
PGSC0003DMG400017876 Solanum tuberosum HOM05D005467 ORTHO05D006523 2.6e-17 92.4 115 45.2
AagrBONN_evm.TU.Sc2ySwM_344.4352 Anthoceros agrestis HOM05D005467 ORTHO05D006523 3.4e-17 92.0 116 37.9
PGSC0003DMG400017875 Solanum tuberosum HOM05D005467 ORTHO05D006523 7.6e-17 90.9 73 56.2
MELO3C012295.2 Cucumis melo HOM05D005467 ORTHO05D006523 2.1e-14 82.8 60 63.3
CDE07G1108 Ceratophyllum demersum HOM05D005467 ORTHO05D006523 4.6e-14 81.6 72 51.4
FAN17G1461 Fragaria x ananassa HOM05D005467 ORTHO05D006523 4.6e-14 81.6 66 56.1
Solyc02g038700.3 Solanum lycopersicum HOM05D005467 ORTHO05D006523 8.8e-13 77.4 72 51.4
MCO12G173 Micromonas commoda HOM05D005467 ORTHO05D006523 4.3e-12 75.1 115 31.3
MSTRG.879 Avicennia marina HOM05D005467 ORTHO05D006523 2.8e-11 72.4 58 53.4
Gohir.D04G138632 Gossypium hirsutum HOM05D005467 ORTHO05D006523 4.2e-07 58.5 41 61.0
Dinv05879 Davidia involucrata HOM05D005467 ORTHO05D006523 7.2e-07 57.8 48 64.6


User provided reference genes

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