Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004524g0030 Nicotiana tabacum HOM05D005467 ORTHO05D006523 5.0e-171 604.4 306 100.0
Nitab4.5_0000350g0200 Nicotiana tabacum HOM05D005467 ORTHO05D006523 7.7e-164 580.5 302 97.0
Peaxi162Scf00205g00928 Petunia axillaris HOM05D005467 ORTHO05D006523 5.5e-154 547.7 302 92.1
CAN.G1489.4 Capsicum annuum HOM05D005467 ORTHO05D006523 1.0e-152 543.5 304 90.5
Sopen05g004250 Solanum pennellii HOM05D005467 ORTHO05D006523 1.4e-149 533.1 302 88.4
Solyc05g008420.4 Solanum lycopersicum HOM05D005467 ORTHO05D006523 1.6e-148 529.6 302 88.1
Potri.010G116200 Populus trichocarpa HOM05D005467 ORTHO05D006523 6.6e-123 444.5 293 73.7
Migut.L00826 Erythranthe guttata HOM05D005467 ORTHO05D006523 4.3e-122 441.8 292 74.3
Migut.L00653 Erythranthe guttata HOM05D005467 ORTHO05D006523 5.6e-122 441.4 292 74.3
QL01p002615 Quercus lobata HOM05D005467 ORTHO05D006523 5.6e-122 441.4 302 72.2
CiPaw.05G246600 Carya illinoinensis HOM05D005467 ORTHO05D006523 7.3e-122 441.0 297 72.7
FvH4_4g26200 Fragaria vesca HOM05D005467 ORTHO05D006523 7.3e-122 441.0 300 72.0
Ciclev10015390m.g Citrus clementina HOM05D005467 ORTHO05D006523 9.5e-122 440.7 286 73.8
Dinv05879 Davidia involucrata HOM05D005467 ORTHO05D006523 9.5e-122 440.7 292 72.9
Thecc.02G211500 Theobroma cacao HOM05D005467 ORTHO05D006523 2.8e-121 439.1 291 72.5
MSTRG.879 Avicennia marina HOM05D005467 ORTHO05D006523 4.7e-121 438.3 297 73.4
CSS0047900 Camellia sinensis var. sinensis HOM05D005467 ORTHO05D006523 4.7e-121 438.3 291 73.5
PGR119G0286 Punica granatum HOM05D005467 ORTHO05D006523 4.7e-121 438.3 300 72.0
FAN12G3855 Fragaria x ananassa HOM05D005467 ORTHO05D006523 6.1e-121 438.0 300 71.3
FAN12G1869 Fragaria x ananassa HOM05D005467 ORTHO05D006523 8.0e-121 437.6 300 71.7
GSVIVG01011792001 Vitis vinifera HOM05D005467 ORTHO05D006523 1.4e-120 436.8 292 71.9
Manes.06G062500 Manihot esculenta HOM05D005467 ORTHO05D006523 2.3e-120 436.0 297 70.7
Actinidia14942 Actinidia chinensis HOM05D005467 ORTHO05D006523 3.1e-120 435.6 292 73.3
Gorai.012G123600 Gossypium raimondii HOM05D005467 ORTHO05D006523 5.2e-120 434.9 292 72.3
Gohir.A04G099200 Gossypium hirsutum HOM05D005467 ORTHO05D006523 6.8e-120 434.5 292 72.3
MD16G1031500 Malus domestica HOM05D005467 ORTHO05D006523 6.8e-120 434.5 298 70.1
RcHm_v2.0_Chr4g0433781 Rosa chinensis HOM05D005467 ORTHO05D006523 1.2e-119 433.7 291 72.9
Nn3g18021 Nelumbo nucifera HOM05D005467 ORTHO05D006523 1.5e-119 433.3 291 72.9
FAN07G0694 Fragaria x ananassa HOM05D005467 ORTHO05D006523 2.0e-119 433.0 300 71.0
Cfa008565 Carpinus fangiana HOM05D005467 ORTHO05D006523 7.5e-119 431.0 294 71.8
Gohir.D04G138632 Gossypium hirsutum HOM05D005467 ORTHO05D006523 7.5e-119 431.0 292 71.6
Atru.chr11.358 Acer truncatum HOM05D005467 ORTHO05D006523 1.7e-118 429.9 288 73.6
Glyma.10G266400 Glycine max HOM05D005467 ORTHO05D006523 2.2e-118 429.5 292 71.6
Sabra10G0087600 Salix brachista HOM05D005467 ORTHO05D006523 8.3e-118 427.6 320 67.5
VMungo0720G1946 Vigna mungo HOM05D005467 ORTHO05D006523 1.1e-117 427.2 292 71.2
TAR629G1677 Trochodendron aralioides HOM05D005467 ORTHO05D006523 1.9e-117 426.4 291 70.4
Hma1.2p1_0114F.1_g055340 Hydrangea macrophylla HOM05D005467 ORTHO05D006523 4.1e-117 425.2 305 69.5
Lj5g0001822 Lotus japonicus HOM05D005467 ORTHO05D006523 4.1e-117 425.2 294 71.4
Phvul.007G035400 Phaseolus vulgaris HOM05D005467 ORTHO05D006523 4.1e-117 425.2 292 71.2
TWI31G0476 Tripterygium wilfordii HOM05D005467 ORTHO05D006523 5.4e-117 424.9 292 69.9
Sabra10G0086000 Salix brachista HOM05D005467 ORTHO05D006523 7.0e-117 424.5 324 66.4
CANSAT01G3134 Cannabis sativa HOM05D005467 ORTHO05D006523 4.6e-116 421.8 298 70.5
Eucgr.G02222 Eucalyptus grandis HOM05D005467 ORTHO05D006523 7.8e-116 421.0 285 73.0
Glyma.20G124100 Glycine max HOM05D005467 ORTHO05D006523 7.8e-116 421.0 297 69.4
HanXRQChr15g0477671 Helianthus annuus HOM05D005467 ORTHO05D006523 7.8e-116 421.0 293 71.0
arahy.Tifrunner.gnm1.ann1.U1J3BU Arachis hypogaea HOM05D005467 ORTHO05D006523 1.3e-115 420.2 297 69.4
Rhsim09G0101300 Rhododendron simsii HOM05D005467 ORTHO05D006523 3.0e-115 419.1 336 64.3
DCAR_007277 Daucus carota HOM05D005467 ORTHO05D006523 3.3e-114 415.6 302 68.9
ECA246G2902 Erigeron canadensis HOM05D005467 ORTHO05D006523 1.2e-113 413.7 287 70.7
Lalb_Chr21g0308561 Lupinus albus HOM05D005467 ORTHO05D006523 1.6e-113 413.3 287 70.0
PSO063G5439 Papaver somniferum HOM05D005467 ORTHO05D006523 1.6e-113 413.3 283 70.0
TPR.G4835 Trifolium pratense HOM05D005467 ORTHO05D006523 2.8e-113 412.5 292 68.8
Sed0008724 Sechium edule HOM05D005467 ORTHO05D006523 3.6e-113 412.1 285 70.5
CsaV3_5G034840 Cucumis sativus L. HOM05D005467 ORTHO05D006523 8.0e-113 411.0 294 68.4
PSO782G0553 Papaver somniferum HOM05D005467 ORTHO05D006523 8.0e-113 411.0 287 69.7
arahy.Tifrunner.gnm1.ann1.F0PHAM Arachis hypogaea HOM05D005467 ORTHO05D006523 3.1e-112 409.1 306 67.3
MELO3C012295.2 Cucumis melo HOM05D005467 ORTHO05D006523 3.1e-112 409.1 290 70.7
Sc04g0005780 Simmondsia chinensis HOM05D005467 ORTHO05D006523 3.4e-111 405.6 275 72.0
Aqoxy3G00153 Aquilegia oxysepala HOM05D005467 ORTHO05D006523 1.4e-109 400.2 287 68.6
Medtr1g108650 Medicago truncatula HOM05D005467 ORTHO05D006523 3.2e-109 399.1 296 66.2
Lj6C750G3 Lonicera japonica HOM05D005467 ORTHO05D006523 7.8e-108 394.4 297 67.3
Psat6g222960 Pisum sativum HOM05D005467 ORTHO05D006523 1.7e-107 393.3 302 65.2
Hund24998 Selenicereus undatus HOM05D005467 ORTHO05D006523 1.1e-106 390.6 292 66.8
Prupe.1G321400 Prunus persica HOM05D005467 ORTHO05D006523 4.7e-105 385.2 251 76.5
Os01g0506200 Oryza sativa ssp. japonica HOM05D005467 ORTHO05D006523 6.2e-105 384.8 291 64.9
Ca_11108_v3 Cicer arietinum L. HOM05D005467 ORTHO05D006523 2.6e-103 379.4 286 66.1
Ah.02g128100 Amaranthus hybridus HOM05D005467 ORTHO05D006523 3.4e-103 379.0 304 62.2
ClCG05G022280 Citrullus lanatus HOM05D005467 ORTHO05D006523 2.2e-102 376.3 369 55.6
MBI10_g46301_MAGBIO Magnolia biondii HOM05D005467 ORTHO05D006523 6.4e-102 374.8 233 78.1
AUR62014129 Chenopodium quinoa HOM05D005467 ORTHO05D006523 8.3e-102 374.4 314 61.8
Duzib248G1088 Durio zibethinus HOM05D005467 ORTHO05D006523 7.1e-101 371.3 292 64.4
TAR622G1271 Trochodendron aralioides HOM05D005467 ORTHO05D006523 4.6e-100 368.6 244 73.8
vmacro10622 Vaccinium macrocarpon HOM05D005467 ORTHO05D006523 7.8e-100 367.9 344 57.6
SGA_v2.0_scaffold50G18532 Striga asiatica HOM05D005467 ORTHO05D006523 4.3e-98 362.1 291 63.6
Cpa.g.sc65.104 Carica papaya HOM05D005467 ORTHO05D006523 8.9e-96 354.4 292 61.6
SMO172G0164 Selaginella moellendorffii HOM05D005467 ORTHO05D006523 6.9e-88 328.2 278 60.1
Oeu064202.3 Olea europaea HOM05D005467 ORTHO05D006523 1.5e-87 327.0 272 61.8
CDE06G2222 Ceratophyllum demersum HOM05D005467 ORTHO05D006523 4.9e-86 322.0 220 71.4
ATR0041G011 Amborella trichopoda HOM05D005467 ORTHO05D006523 1.6e-81 307.0 277 55.6
SEGI_12457 Sequoiadendron giganteum HOM05D005467 ORTHO05D006523 3.4e-79 299.3 248 60.9
AUR62039552 Chenopodium quinoa HOM05D005467 ORTHO05D006523 5.8e-79 298.5 314 52.9
unitig_21.g20024 Utricularia gibba HOM05D000903 ORTHO05D000731 1.9e-77 293.5 291 55.0
Nitab4.5_0000293g0010 Nicotiana tabacum HOM05D005467 ORTHO05D006523 1.0e-75 287.7 292 51.0
Dinv04888 Davidia involucrata HOM05D005467 ORTHO05D006523 1.6e-73 280.4 185 72.4
AagrBONN_evm.TU.Sc2ySwM_344.4352 Anthoceros agrestis HOM05D005467 ORTHO05D006523 5.3e-72 275.4 273 53.5
Pp3c22_2590 Physcomitrium patens HOM05D005467 ORTHO05D006523 7.1e-69 265.0 211 61.6
Nitab4.5_0000350g0270 Nicotiana tabacum HOM05D005467 ORTHO05D006523 1.5e-66 257.3 315 46.3
Cc11_g09130 Coffea canephora HOM05D005467 ORTHO05D006523 1.0e-59 234.6 157 75.2
Peaxi162Scf00159g00824 Petunia axillaris HOM05D005467 ORTHO05D006523 6.7e-59 231.9 439 37.1
Gohir.D04G138566 Gossypium hirsutum HOM05D005467 ORTHO05D006523 1.5e-58 230.7 158 71.5
Sopen02g012020 Solanum pennellii HOM05D005467 ORTHO05D006523 3.3e-58 229.6 270 45.2
Lsat_1_v5_gn_3_54101 Lactuca sativa HOM05D005467 ORTHO05D006523 6.3e-57 225.3 152 75.7
CBR_g17592 Chara braunii HOM05D005467 ORTHO05D006523 1.5e-55 220.7 270 46.3
PGSC0003DMG400017873 Solanum tuberosum HOM05D005467 ORTHO05D006523 2.2e-54 216.9 306 39.5
Cc11_g09120 Coffea canephora HOM05D005467 ORTHO05D006523 2.9e-54 216.5 142 73.9
Haze_11049 Corylus avellana HOM05D005467 ORTHO05D006523 2.5e-53 213.4 160 65.6
Sopen02g012000 Solanum pennellii HOM05D005467 ORTHO05D006523 2.5e-53 213.4 303 39.6
Peaxi162Scf00159g00823 Petunia axillaris HOM05D005467 ORTHO05D006523 1.2e-52 211.1 253 43.9
PGSC0003DMG400029189 Solanum tuberosum HOM05D005467 ORTHO05D006523 2.1e-52 210.3 271 39.9
Sopen02g012010 Solanum pennellii HOM05D005467 ORTHO05D006523 2.5e-50 203.4 275 38.9
HPP92_008650 Vanilla planifolia HOM05D005467 ORTHO05D006523 1.8e-48 197.2 158 63.3
Haze_11050 Corylus avellana HOM05D005467 ORTHO05D006523 2.4e-48 196.8 199 53.8
Zm00001eb341680 Zea mays HOM05D005467 ORTHO05D006523 9.1e-48 194.9 161 60.2
Solyc02g038680.1 Solanum lycopersicum HOM05D005467 ORTHO05D006523 7.9e-44 181.8 266 39.5
Lsat_1_v5_gn_3_86380 Lactuca sativa HOM05D005467 ORTHO05D006523 1.3e-41 174.5 252 42.5
PRCOL_00002109 Prasinoderma coloniale HOM05D005467 ORTHO05D006523 1.8e-40 170.6 270 37.4
MCO12G173 Micromonas commoda HOM05D005467 ORTHO05D006523 1.5e-39 167.5 254 41.7
Sed0021963 Sechium edule HOM05D005467 ORTHO05D006523 1.5e-39 167.5 263 39.9
RcHm_v2.0_Chr7g0235151 Rosa chinensis HOM05D005467 ORTHO05D006523 4.5e-39 166.0 105 76.2
Solyc02g038660.3 Solanum lycopersicum HOM05D005467 ORTHO05D006523 7.7e-39 165.2 270 38.1
Nitab4.5_0019054g0020 Nicotiana tabacum HOM05D005467 ORTHO05D006523 1.6e-36 157.5 275 36.7
Lsat_1_v5_gn_3_107041 Lactuca sativa HOM05D005467 ORTHO05D006523 1.5e-34 151.0 216 44.0
Solyc02g038670.3 Solanum lycopersicum HOM05D005467 ORTHO05D006523 5.3e-32 142.5 276 32.2
Solyc02g038650.1 Solanum lycopersicum HOM05D005467 ORTHO05D006523 2.6e-31 140.2 228 36.8
Nitab4.5_0002820g0070 Nicotiana tabacum HOM05D005467 ORTHO05D006523 2.9e-30 136.7 143 51.0
Lsat_1_v5_gn_4_96160 Lactuca sativa HOM05D005467 ORTHO05D006523 6.5e-30 135.6 112 64.3
Lsat_1_v5_gn_7_58700 Lactuca sativa HOM05D005467 ORTHO05D006523 6.5e-30 135.6 95 71.6
Peaxi162Scf00205g00812 Petunia axillaris HOM05D005467 ORTHO05D006523 2.1e-28 130.6 303 32.7
RcHm_v2.0_Chr3g0493761 Rosa chinensis HOM05D005467 ORTHO05D006523 3.0e-27 126.7 86 70.9
Lsat_1_v5_gn_6_22900 Lactuca sativa HOM05D005467 ORTHO05D006523 1.2e-20 104.8 83 65.1
Phvul.008G137000 Phaseolus vulgaris HOM05D005467 ORTHO05D006523 4.0e-19 99.8 54 81.5
Nitab4.5_0000688g0010 Nicotiana tabacum HOM05D005467 ORTHO05D006523 2.0e-18 97.4 147 40.1
PGSC0003DMG400029188 Solanum tuberosum HOM05D005467 ORTHO05D006523 8.3e-17 92.0 125 37.6
PGSC0003DMG400038827 Solanum tuberosum HOM05D005467 ORTHO05D006523 1.8e-16 90.9 104 38.5
FAN17G2566 Fragaria x ananassa HOM05D005467 ORTHO05D006523 1.2e-15 88.2 70 65.7
Solyc02g038700.3 Solanum lycopersicum HOM05D005467 ORTHO05D006523 1.6e-12 77.8 94 41.5
Cre12.g549600 Chlamydomonas reinhardtii HOM05D005467 ORTHO05D006523 6.3e-09 65.9 151 31.8
CDE07G1559 Ceratophyllum demersum HOM05D005467 ORTHO05D006523 1.2e-07 61.6 47 57.4
PGSC0003DMG400017876 Solanum tuberosum HOM05D005467 ORTHO05D006523 1.6e-07 61.2 289 22.1
FAN17G1461 Fragaria x ananassa HOM05D005467 ORTHO05D006523 4.6e-07 59.7 54 59.3
Sopen02g012080 Solanum pennellii HOM05D005467 ORTHO05D006523 5.9e-07 59.3 171 30.4
SEGI_39271 Sequoiadendron giganteum HOM05D005467 ORTHO05D006523 7.8e-07 58.9 53 54.7
Solyc02g062200.1 Solanum lycopersicum HOM05D005467 ORTHO05D006523 1.3e-06 58.2 89 36.0


User provided reference genes

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