Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004516g0010 Nicotiana tabacum HOM05D005211 ORTHO05D006148 1.4e-54 216.1 110 100.0
Peaxi162Scf00335g00067 Petunia axillaris HOM05D005211 ORTHO05D006148 3.4e-21 105.1 83 71.1
PGSC0003DMG400005560 Solanum tuberosum HOM05D005211 ORTHO05D006148 3.4e-21 105.1 79 70.9
Cc01_g16110 Coffea canephora HOM05D005211 ORTHO05D006148 1.7e-17 92.8 79 68.4
Oeu003658.1 Olea europaea HOM05D005211 ORTHO05D006148 1.1e-16 90.1 87 58.6
Oeu049588.1 Olea europaea HOM05D005211 ORTHO05D006148 1.6e-15 86.3 87 56.3
Oeu057829.1 Olea europaea HOM05D005211 ORTHO05D006148 8.1e-15 84.0 79 55.7
Rhsim13G0052900 Rhododendron simsii HOM05D005211 ORTHO05D006148 1.1e-14 83.6 93 50.5
TAR636G0814 Trochodendron aralioides HOM05D005211 ORTHO05D006148 1.1e-14 83.6 85 54.1
EL10Ac5g10623 Beta vulgaris HOM05D005211 ORTHO05D006148 1.8e-14 82.8 87 52.9
QL10p044103 Quercus lobata HOM05D005211 ORTHO05D006148 1.8e-14 82.8 85 54.1
Solyc12g042010.1 Solanum lycopersicum HOM05D005211 ORTHO05D006148 2.4e-14 82.4 79 59.5
Prupe.8G190000 Prunus persica HOM05D005211 ORTHO05D006148 3.1e-14 82.0 91 53.8
Sopen09g012960 Solanum pennellii HOM05D005211 ORTHO05D006148 4.0e-14 81.6 79 59.5
TAR365G0119 Trochodendron aralioides HOM05D005211 ORTHO05D006148 9.0e-14 80.5 85 51.8
Aqoxy2G03955 Aquilegia oxysepala HOM05D005211 ORTHO05D006148 1.2e-13 80.1 93 49.5
MD05G1158800 Malus domestica HOM05D005211 ORTHO05D006148 2.6e-13 79.0 82 50.0
Sc17g0001650 Simmondsia chinensis HOM05D005211 ORTHO05D006148 5.8e-13 77.8 81 54.3
AUR62028696 Chenopodium quinoa HOM05D005211 ORTHO05D006148 7.6e-13 77.4 87 54.0
Hma1.2p1_0412F.1_g147140 Hydrangea macrophylla HOM05D005211 ORTHO05D006148 7.6e-13 77.4 82 48.8
Nn1g08305 Nelumbo nucifera HOM05D005211 ORTHO05D006148 7.6e-13 77.4 85 48.2
Lj2P1117T13 Lonicera japonica HOM05D005211 ORTHO05D006148 9.9e-13 77.0 93 48.4
Manes.12G059000 Manihot esculenta HOM05D005211 ORTHO05D006148 9.9e-13 77.0 101 44.6
Actinidia23357 Actinidia chinensis HOM05D005211 ORTHO05D006148 1.3e-12 76.6 82 51.2
Lj1P101T27 Lonicera japonica HOM05D005211 ORTHO05D006148 1.3e-12 76.6 84 54.8
Oeu013415.1 Olea europaea HOM05D005211 ORTHO05D006148 1.3e-12 76.6 88 52.3
TAR633G2277 Trochodendron aralioides HOM05D005211 ORTHO05D006148 1.3e-12 76.6 83 51.8
RcHm_v2.0_Chr6g0282791 Rosa chinensis HOM05D005211 ORTHO05D006148 1.7e-12 76.3 99 47.5
CSS0012153 Camellia sinensis var. sinensis HOM05D005211 ORTHO05D006148 2.2e-12 75.9 85 55.3
CSS0028586 Camellia sinensis var. sinensis HOM05D005211 ORTHO05D006148 2.2e-12 75.9 85 55.3
Cpa.g.sc8.70 Carica papaya HOM05D005211 ORTHO05D006148 2.9e-12 75.5 99 49.5
CiPaw.13G055500 Carya illinoinensis HOM05D005211 ORTHO05D006148 2.9e-12 75.5 91 49.5
Eucgr.H00724 Eucalyptus grandis HOM05D005211 ORTHO05D006148 2.9e-12 75.5 98 45.9
FvH4_2g17760 Fragaria vesca HOM05D005211 ORTHO05D006148 2.9e-12 75.5 101 46.5
Manes.11G114000 Manihot esculenta HOM05D005211 ORTHO05D006148 3.8e-12 75.1 87 51.7
MD10G1151700 Malus domestica HOM05D005211 ORTHO05D006148 6.4e-12 74.3 82 47.6
Thecc.01G210700 Theobroma cacao HOM05D005211 ORTHO05D006148 6.4e-12 74.3 99 46.5
vmacro02818 Vaccinium macrocarpon HOM05D005211 ORTHO05D006148 6.4e-12 74.3 101 43.6
CiPaw.14G044000 Carya illinoinensis HOM05D005211 ORTHO05D006148 8.4e-12 73.9 89 49.4
Cfa008551 Carpinus fangiana HOM05D005211 ORTHO05D006148 1.1e-11 73.6 87 48.3
CiPaw.01G108100 Carya illinoinensis HOM05D005211 ORTHO05D006148 1.1e-11 73.6 88 46.6
FAN15G2376 Fragaria x ananassa HOM05D005211 ORTHO05D006148 1.1e-11 73.6 100 46.0
FAN27G2625 Fragaria x ananassa HOM05D005211 ORTHO05D006148 1.1e-11 73.6 100 45.0
Dinv28809 Davidia involucrata HOM05D005211 ORTHO05D006148 1.4e-11 73.2 86 50.0
MBI07_g35368_MAGBIO Magnolia biondii HOM05D005211 ORTHO05D006148 1.4e-11 73.2 85 47.1
Prupe.8G190100 Prunus persica HOM05D005211 ORTHO05D006148 1.9e-11 72.8 91 45.1
FAN24G0649 Fragaria x ananassa HOM05D005211 ORTHO05D006148 2.4e-11 72.4 100 45.0
Gorai.001G228500 Gossypium raimondii HOM05D005211 ORTHO05D006148 3.2e-11 72.0 97 45.4
Manes.13G054600 Manihot esculenta HOM05D005211 ORTHO05D006148 3.2e-11 72.0 104 43.3
Gohir.D07G203100 Gossypium hirsutum HOM05D005211 ORTHO05D006148 4.2e-11 71.6 97 45.4
Duzib133G1390 Durio zibethinus HOM05D005211 ORTHO05D006148 5.4e-11 71.2 104 40.4
FAN12G0052 Fragaria x ananassa HOM05D005211 ORTHO05D006148 5.4e-11 71.2 87 48.3
QL93p0263_0042 Quercus lobata HOM05D005211 ORTHO05D006148 5.4e-11 71.2 86 52.3
ECA247G2119 Erigeron canadensis HOM05D005211 ORTHO05D006148 7.1e-11 70.9 105 48.6
Gohir.A07G196700 Gossypium hirsutum HOM05D005211 ORTHO05D006148 7.1e-11 70.9 97 44.3
RcHm_v2.0_Chr6g0282781 Rosa chinensis HOM05D005211 ORTHO05D006148 7.1e-11 70.9 89 49.4
MELO3C026134.2 Cucumis melo HOM05D005211 ORTHO05D006148 9.3e-11 70.5 80 47.5
COL.COLO4_26568 Corchorus olitorius HOM05D005211 ORTHO05D006148 1.2e-10 70.1 93 47.3
Haze_11077 Corylus avellana HOM05D005211 ORTHO05D006148 1.2e-10 70.1 91 42.9
FAN07G0144 Fragaria x ananassa HOM05D005211 ORTHO05D006148 1.6e-10 69.7 87 48.3
FAN12G3367 Fragaria x ananassa HOM05D005211 ORTHO05D006148 1.6e-10 69.7 87 47.1
FAN22G0040 Fragaria x ananassa HOM05D005211 ORTHO05D006148 1.6e-10 69.7 87 48.3
FAN22G0070 Fragaria x ananassa HOM05D005211 ORTHO05D006148 1.6e-10 69.7 87 48.3
Potri.002G232500 Populus trichocarpa HOM05D005211 ORTHO05D006148 2.1e-10 69.3 90 46.7
Actinidia30014 Actinidia chinensis HOM05D005211 ORTHO05D006148 2.7e-10 68.9 82 50.0
CiPaw.02G059600 Carya illinoinensis HOM05D005211 ORTHO05D006148 2.7e-10 68.9 87 48.3
FAN15G0641 Fragaria x ananassa HOM05D005211 ORTHO05D006148 2.7e-10 68.9 90 48.9
Duzib211G0461 Durio zibethinus HOM05D005211 ORTHO05D006148 3.5e-10 68.6 105 41.0
HanXRQChr01g0007251 Helianthus annuus HOM05D005211 ORTHO05D006148 3.5e-10 68.6 107 43.0
Lsat_1_v5_gn_5_178301 Lactuca sativa HOM05D005211 ORTHO05D006148 3.5e-10 68.6 109 41.3
QL09p046680 Quercus lobata HOM05D005211 ORTHO05D006148 3.5e-10 68.6 87 52.9
Eucgr.H00442 Eucalyptus grandis HOM05D005211 ORTHO05D006148 4.6e-10 68.2 88 45.5
TWI18G0981 Tripterygium wilfordii HOM05D005211 ORTHO05D006148 4.6e-10 68.2 86 46.5
TWI36G1602 Tripterygium wilfordii HOM05D005211 ORTHO05D006148 4.6e-10 68.2 86 47.7
MD05G1158700 Malus domestica HOM05D005211 ORTHO05D006148 6.0e-10 67.8 95 45.3
RcHm_v2.0_Chr4g0409781 Rosa chinensis HOM05D005211 ORTHO05D006148 7.8e-10 67.4 86 47.7
DCAR_004769 Daucus carota HOM05D005211 ORTHO05D006148 1.0e-09 67.0 94 44.7
Sabra02G0177300 Salix brachista HOM05D005211 ORTHO05D006148 1.0e-09 67.0 88 46.6
Hma1.2p1_0959F.1_g241620 Hydrangea macrophylla HOM05D005211 ORTHO05D006148 1.3e-09 66.6 96 43.8
ATR0686G247 Amborella trichopoda HOM05D005211 ORTHO05D006148 1.7e-09 66.2 86 48.8
Gohir.D07G167400 Gossypium hirsutum HOM05D005211 ORTHO05D006148 2.3e-09 65.9 91 47.3
Dinv10443 Davidia involucrata HOM05D005211 ORTHO05D006148 3.0e-09 65.5 108 41.7
Duzib138G1875 Durio zibethinus HOM05D005211 ORTHO05D006148 3.0e-09 65.5 103 42.7
Gohir.A11G142700 Gossypium hirsutum HOM05D005211 ORTHO05D006148 3.0e-09 65.5 110 40.9
FvH4_2g17750 Fragaria vesca HOM05D005211 ORTHO05D006148 3.9e-09 65.1 96 44.8
FAN24G3081 Fragaria x ananassa HOM05D005211 ORTHO05D006148 3.9e-09 65.1 96 44.8
FAN27G1389 Fragaria x ananassa HOM05D005211 ORTHO05D006148 3.9e-09 65.1 90 47.8
PSO675G5714 Papaver somniferum HOM05D005211 ORTHO05D006148 3.9e-09 65.1 106 37.7
SGA_v2.0_scaffold77G25295 Striga asiatica HOM05D005211 ORTHO05D006148 3.9e-09 65.1 93 44.1
CANSAT78G0009 Cannabis sativa HOM05D005211 ORTHO05D006148 5.1e-09 64.7 99 37.4
Migut.D00738 Erythranthe guttata HOM05D005211 ORTHO05D006148 5.1e-09 64.7 121 39.7
CsaV3_6G003020 Cucumis sativus L. HOM05D005211 ORTHO05D006148 6.6e-09 64.3 79 40.5
HPP92_023344 Vanilla planifolia HOM05D005211 ORTHO05D006148 6.6e-09 64.3 79 49.4
Ciclev10016996m.g Citrus clementina HOM05D005211 ORTHO05D006148 8.7e-09 63.9 102 40.2
Gohir.D11G149000 Gossypium hirsutum HOM05D005211 ORTHO05D006148 1.1e-08 63.5 110 40.9
MD10G1151600 Malus domestica HOM05D005211 ORTHO05D006148 1.1e-08 63.5 105 42.9
ClCG08G003780 Citrullus lanatus HOM05D005211 ORTHO05D006148 1.5e-08 63.2 81 42.0
Gorai.007G159800 Gossypium raimondii HOM05D005211 ORTHO05D006148 1.5e-08 63.2 110 40.0
Sabra14G0113200 Salix brachista HOM05D005211 ORTHO05D006148 1.5e-08 63.2 90 46.7
Sed0015684 Sechium edule HOM05D005211 ORTHO05D006148 1.5e-08 63.2 79 44.3
TWI63G1319 Tripterygium wilfordii HOM05D005211 ORTHO05D006148 1.9e-08 62.8 82 43.9
Potri.014G149800 Populus trichocarpa HOM05D005211 ORTHO05D006148 2.5e-08 62.4 91 46.2
Prupe.1G178500 Prunus persica HOM05D005211 ORTHO05D006148 3.3e-08 62.0 87 43.7
CDE02G4090 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 7.3e-08 60.8 102 41.2
CDE07G0882 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 9.6e-08 60.5 88 38.6
PGR083G0764 Punica granatum HOM05D005211 ORTHO05D006148 2.8e-07 58.9 94 41.5
Migut.N00665 Erythranthe guttata HOM05D005211 ORTHO05D006148 4.8e-07 58.2 79 46.8
MSTRG.18497 Avicennia marina HOM05D005211 ORTHO05D006148 8.1e-07 57.4 85 43.5
THA.LOC104803428 Tarenaya hassleriana HOM05D005211 ORTHO05D006148 8.1e-07 57.4 98 42.9
Aa31LG1G24830 Aethionema arabicum HOM05D005211 ORTHO05D006148 1.1e-06 57.0 77 45.5
CANSAT01G0934 Cannabis sativa HOM05D005211 ORTHO05D006148 1.4e-06 56.6 99 38.4
unitig_0.g414 Utricularia gibba HOM05D005211 ORTHO05D006148 1.4e-06 56.6 80 45.0
CDE09G1368 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 1.8e-06 56.2 90 40.0
PGR142G0694 Punica granatum HOM05D005211 ORTHO05D006148 2.4e-06 55.8 107 34.6
CSS0032639 Camellia sinensis var. sinensis HOM05D005211 ORTHO05D006148 3.1e-06 55.5 40 65.0
CDE04G3135 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 3.1e-06 55.5 88 38.6
Carub.0004s2554 Capsella rubella HOM05D005211 ORTHO05D006148 5.3e-06 54.7 84 40.5
Gorai.N002800 Gossypium raimondii HOM05D005211 ORTHO05D006148 6.9e-06 54.3 92 35.9


User provided reference genes

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