Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004512g0040 Nicotiana tabacum HOM05D007931 ORTHO05D014660 1.8e-102 375.9 191 100.0
Nitab4.5_0001659g0050 Nicotiana tabacum HOM05D007931 ORTHO05D014660 4.3e-40 168.7 151 62.9
Nitab4.5_0011919g0030 Nicotiana tabacum HOM05D015265 ORTHO05D014660 2.2e-28 129.8 71 88.7
Nitab4.5_0003032g0060 Nicotiana tabacum HOM05D007931 ORTHO05D014660 1.6e-26 123.6 83 78.3
Nitab4.5_0010531g0070 Nicotiana tabacum HOM05D007931 ORTHO05D010331 4.7e-26 122.1 108 63.9
Solyc02g084031.1 Solanum lycopersicum HOM05D007931 ORTHO05D000006 2.6e-24 116.3 190 39.5
Nitab4.5_0005181g0030 Nicotiana tabacum HOM05D015265 ORTHO05D014660 5.0e-20 102.1 59 81.4
SGA_v2.0_scaffold14G07070 Striga asiatica HOM05D000003 ORTHO05D000004 1.1e-11 74.3 199 25.1
Sopen02g028850 Solanum pennellii HOM05D015265 ORTHO05D014660 3.2e-11 72.8 53 60.4
Nitab4.5_0001238g0090 Nicotiana tabacum HOM05D015265 ORTHO05D014660 5.5e-11 72.0 72 43.1
SGA_v2.0_scaffold23G10019 Striga asiatica HOM05D000003 ORTHO05D000004 8.0e-10 68.2 174 30.5
Nitab4.5_0009977g0020 Nicotiana tabacum HOM05D015265 ORTHO05D014660 3.0e-09 66.2 78 42.3
Cc04_g12750 Coffea canephora HOM05D000170 ORTHO05D000154 6.8e-09 65.1 80 36.2
Nitab4.5_0001243g0060 Nicotiana tabacum HOM05D015265 ORTHO05D014660 2.0e-08 63.5 54 48.1
SGA_v2.0_scaffold53G19353 Striga asiatica HOM05D000003 ORTHO05D000006 2.6e-08 63.2 157 28.0
Manes.03G145466 Manihot esculenta HOM05D000003 ORTHO05D000006 1.3e-07 60.8 83 37.3
RhsimUnG0010200 Rhododendron simsii HOM05D000003 ORTHO05D000004 3.7e-07 59.3 194 24.2
SGA_v2.0_scaffold17G08062 Striga asiatica HOM05D000003 ORTHO05D000006 3.7e-07 59.3 222 23.4
Rhsim01G0161700 Rhododendron simsii HOM05D000003 ORTHO05D000004 6.3e-07 58.5 194 23.7
SGA_v2.0_scaffold18G08392 Striga asiatica HOM05D000003 ORTHO05D000006 1.1e-06 57.8 72 40.3
MD08G1205700 Malus domestica HOM05D000003 ORTHO05D000004 4.1e-06 55.8 199 24.1
SGA_v2.0_scaffold139G35393 Striga asiatica HOM05D000003 ORTHO05D000006 4.1e-06 55.8 86 31.4
Nitab4.5_0003161g0060 Nicotiana tabacum HOM05D015265 ORTHO05D014660 5.4e-06 55.5 56 44.6
Rhsim08G0091800 Rhododendron simsii HOM05D000003 ORTHO05D000004 7.0e-06 55.1 191 26.2
SGA_v2.0_scaffold36G14428 Striga asiatica HOM05D024619 ORTHO05D017136 7.0e-06 55.1 68 36.8
FvH4_5g06193 Fragaria vesca HOM05D000003 ORTHO05D015112 9.1e-06 54.7 182 22.5
SGA_v2.0_scaffold6G03465 Striga asiatica HOM05D000003 ORTHO05D000006 9.1e-06 54.7 83 33.7


User provided reference genes

Program Settings