Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004512g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 8.7e-207 723.4 365 100.0
Nitab4.5_0002837g0060 Nicotiana tabacum HOM05D007931 ORTHO05D010331 6.3e-72 275.4 163 82.2
Nitab4.5_0013264g0010 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.1e-65 254.6 148 84.5
Nitab4.5_0002433g0100 Nicotiana tabacum HOM05D007931 ORTHO05D010331 9.7e-65 251.5 148 83.8
Nitab4.5_0007096g0060 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.0e-58 231.5 166 72.3
Nitab4.5_0001840g0090 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.2e-57 228.0 148 77.0
Nitab4.5_0005181g0020 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.3e-53 214.5 127 83.5
Nitab4.5_0003063g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.6e-51 207.6 127 81.9
Nitab4.5_0001434g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 4.4e-49 199.5 201 58.7
Nitab4.5_0001005g0120 Nicotiana tabacum HOM05D007931 ORTHO05D010331 4.9e-40 169.5 119 75.6
Nitab4.5_0000016g0590 Nicotiana tabacum HOM05D007931 ORTHO05D010331 2.8e-35 153.7 115 67.8
Nitab4.5_0000265g0090 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.0e-34 151.8 140 55.0
Nitab4.5_0011741g0020 Nicotiana tabacum HOM05D007931 ORTHO05D010331 5.2e-34 149.4 136 60.3
Nitab4.5_0010531g0070 Nicotiana tabacum HOM05D007931 ORTHO05D010331 4.4e-33 146.4 108 72.2
Nitab4.5_0002199g0040 Nicotiana tabacum HOM05D007931 ORTHO05D010331 2.0e-30 137.5 147 43.5
Nitab4.5_0003727g0050 Nicotiana tabacum HOM05D007931 ORTHO05D010331 5.0e-29 132.9 100 68.0
Nitab4.5_0008942g0060 Nicotiana tabacum HOM05D007931 ORTHO05D010331 2.1e-27 127.5 77 83.1
PGSC0003DMG400030025 Solanum tuberosum HOM05D007931 ORTHO05D010331 1.4e-26 124.8 131 45.8
Nitab4.5_0008257g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 2.3e-26 124.0 79 82.3
Nitab4.5_0005843g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 5.2e-26 122.9 115 52.2
Nitab4.5_0000871g0010 Nicotiana tabacum HOM05D007931 ORTHO05D010331 7.5e-25 119.0 162 41.4
Nitab4.5_0003032g0060 Nicotiana tabacum HOM05D007931 ORTHO05D014660 9.2e-23 112.1 66 78.8
Nitab4.5_0003161g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 6.6e-21 105.9 130 43.1
Nitab4.5_0003766g0040 Nicotiana tabacum HOM05D007931 ORTHO05D010331 8.6e-21 105.5 81 71.6
Nitab4.5_0000128g0350 Nicotiana tabacum HOM05D007931 ORTHO05D010331 2.1e-19 100.9 100 46.0
Nitab4.5_0000075g0220 Nicotiana tabacum HOM05D007931 ORTHO05D010331 5.2e-18 96.3 97 49.5
Nitab4.5_0003244g0010 Nicotiana tabacum HOM05D007931 ORTHO05D010331 2.6e-17 94.0 101 43.6
Sopen10g023470 Solanum pennellii HOM05D007931 ORTHO05D010331 2.6e-17 94.0 98 50.0
Sopen02g028840 Solanum pennellii HOM05D007931 ORTHO05D010331 3.4e-17 93.6 75 65.3
PGSC0003DMG400030140 Solanum tuberosum HOM05D007931 ORTHO05D010331 4.4e-17 93.2 80 52.5
Solyc11g068410.1 Solanum lycopersicum HOM05D007931 ORTHO05D010331 9.9e-17 92.0 74 63.5
Nitab4.5_0002082g0020 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.3e-16 91.7 144 37.5
Nitab4.5_0004037g0020 Nicotiana tabacum HOM05D007931 ORTHO05D010331 8.4e-16 89.0 96 44.8
Solyc08g067650.2 Solanum lycopersicum HOM05D007931 ORTHO05D010331 1.5e-12 78.2 118 42.4
Nitab4.5_0001297g0070 Nicotiana tabacum HOM05D007931 ORTHO05D010331 2.5e-12 77.4 71 56.3
Nitab4.5_0003434g0110 Nicotiana tabacum HOM05D007931 ORTHO05D010331 4.7e-11 73.2 108 38.9
Nitab4.5_0000780g0060 Nicotiana tabacum HOM05D007931 ORTHO05D010331 8.1e-11 72.4 75 52.0
Nitab4.5_0006590g0040 Nicotiana tabacum HOM05D007931 ORTHO05D010331 8.1e-11 72.4 112 38.4
Nitab4.5_0009159g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 6.8e-10 69.3 114 34.2
Nitab4.5_0002239g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 8.9e-10 68.9 99 37.4
Nitab4.5_0005933g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 3.4e-09 67.0 67 52.2
Nitab4.5_0002698g0150 Nicotiana tabacum HOM05D007931 ORTHO05D010331 4.4e-09 66.6 85 40.0
PGSC0003DMG400040885 Solanum tuberosum HOM05D007931 ORTHO05D010331 9.9e-09 65.5 57 61.4
Solyc02g032630.2 Solanum lycopersicum HOM05D007931 ORTHO05D010331 1.7e-08 64.7 92 41.3
Nitab4.5_0000501g0080 Nicotiana tabacum HOM05D002274 ORTHO05D002460 4.9e-08 63.2 69 52.2
Nitab4.5_0000760g0010 Nicotiana tabacum HOM05D007931 ORTHO05D010331 4.9e-08 63.2 75 38.7
Nitab4.5_0003727g0070 Nicotiana tabacum HOM05D007931 ORTHO05D010331 4.9e-08 63.2 43 69.8
Atru.chr3.843 Acer truncatum HOM05D000003 ORTHO05D000167 1.1e-07 62.0 116 35.3
Nitab4.5_0000055g0280 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.4e-07 61.6 57 54.4
Lj2C40G9 Lonicera japonica HOM05D008183 ORTHO05D007254 2.4e-07 60.8 120 26.7
Peaxi162Scf00457g00055 Petunia axillaris HOM05D007931 ORTHO05D010331 4.2e-07 60.1 80 41.2
Solyc02g084031.1 Solanum lycopersicum HOM05D007931 ORTHO05D000006 4.2e-07 60.1 49 63.3
Sed0025544 Sechium edule HOM05D000003 ORTHO05D000167 9.3e-07 58.9 116 25.0
PGSC0003DMG400014334 Solanum tuberosum HOM05D007931 ORTHO05D010331 9.3e-07 58.9 83 37.3
Ciclev10013872m.g Citrus clementina HOM05D000003 ORTHO05D000167 1.2e-06 58.5 116 31.0
Nitab4.5_0000016g0560 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.2e-06 58.5 39 71.8
Atru.chr10.149 Acer truncatum HOM05D000003 ORTHO05D000004 3.5e-06 57.0 133 27.1
Sopen02g012250 Solanum pennellii HOM05D000004 ORTHO05D000002 3.5e-06 57.0 55 54.5
Atru.chr3.1147 Acer truncatum HOM05D000003 ORTHO05D000167 6.0e-06 56.2 93 34.4
Prupe.1G162400 Prunus persica HOM05D000003 ORTHO05D000022 6.0e-06 56.2 105 32.4
MD08G1205700 Malus domestica HOM05D000003 ORTHO05D000004 7.8e-06 55.8 76 40.8
Nitab4.5_0010978g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 7.8e-06 55.8 64 45.3


User provided reference genes

Program Settings