Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004508g0020 Nicotiana tabacum HOM05D008306 ORTHO05D004636 1.3e-51 206.1 100 100.0
Nitab4.5_0004988g0020 Nicotiana tabacum HOM05D008306 ORTHO05D004636 1.8e-29 132.5 80 76.2
Nitab4.5_0002189g0010 Nicotiana tabacum HOM05D000067 ORTHO05D004636 3.4e-20 101.7 82 59.8
Nitab4.5_0003210g0020 Nicotiana tabacum HOM05D008306 ORTHO05D004636 9.3e-18 93.6 80 57.5
Nitab4.5_0000197g0070 Nicotiana tabacum HOM05D008306 ORTHO05D004636 1.2e-17 93.2 81 53.1
Nitab4.5_0002177g0030 Nicotiana tabacum HOM05D008306 ORTHO05D004636 2.3e-16 89.0 82 54.9
Nitab4.5_0003252g0020 Nicotiana tabacum HOM05D008306 ORTHO05D004636 1.1e-15 86.7 85 47.1
Nitab4.5_0002138g0090 Nicotiana tabacum HOM05D008306 ORTHO05D004636 6.2e-14 80.9 70 58.6
Nitab4.5_0001602g0020 Nicotiana tabacum HOM05D008306 ORTHO05D004636 8.1e-14 80.5 61 62.3
Nitab4.5_0008516g0020 Nicotiana tabacum HOM05D008306 ORTHO05D004636 2.4e-13 79.0 83 44.6
Nitab4.5_0002978g0180 Nicotiana tabacum HOM05D008381 ORTHO05D004636 3.1e-13 78.6 91 44.0
Nitab4.5_0007897g0030 Nicotiana tabacum HOM05D008306 ORTHO05D004636 4.5e-12 74.7 76 55.3
Nitab4.5_0007532g0030 Nicotiana tabacum HOM05D008306 ORTHO05D004636 1.0e-11 73.6 83 41.0
Nitab4.5_0000411g0070 Nicotiana tabacum HOM05D000003 ORTHO05D004636 2.5e-10 68.9 76 43.4
FvH4_3g23482 Fragaria vesca HOM05D000279 ORTHO05D000022 3.2e-10 68.6 83 41.0
Nitab4.5_0001119g0130 Nicotiana tabacum HOM05D008381 ORTHO05D004636 3.2e-10 68.6 90 36.7
Nitab4.5_0003182g0080 Nicotiana tabacum HOM05D008306 ORTHO05D004636 3.2e-10 68.6 82 42.7
EL10Ac1g02112 Beta vulgaris HOM05D000003 ORTHO05D000006 7.1e-10 67.4 81 43.2
Nitab4.5_0000433g0180 Nicotiana tabacum HOM05D008381 ORTHO05D004636 2.1e-09 65.9 73 43.8
Nitab4.5_0001055g0020 Nicotiana tabacum HOM05D008381 ORTHO05D004636 2.1e-09 65.9 73 43.8
RcHm_v2.0_Chr5g0041361 Rosa chinensis HOM05D000279 ORTHO05D000022 4.6e-09 64.7 83 42.2
Prupe.4G223300 Prunus persica HOM05D000279 ORTHO05D000022 6.0e-09 64.3 89 40.4
Nitab4.5_0001319g0060 Nicotiana tabacum HOM05D011052 ORTHO05D004636 7.9e-09 63.9 94 39.4
Nitab4.5_0005760g0010 Nicotiana tabacum HOM05D000003 ORTHO05D004636 1.0e-08 63.5 92 38.0
EL10Ac3g05611 Beta vulgaris HOM05D000003 ORTHO05D000022 2.3e-08 62.4 80 42.5
Peaxi162Scf00464g00024 Petunia axillaris HOM05D008381 ORTHO05D004636 2.3e-08 62.4 78 37.2
MD11G1210000 Malus domestica HOM05D000279 ORTHO05D000498 3.9e-08 61.6 83 39.8
Nitab4.5_0004769g0040 Nicotiana tabacum HOM05D008306 ORTHO05D004636 3.9e-08 61.6 74 47.3
Peaxi162Scf00039g00811 Petunia axillaris HOM05D005774 ORTHO05D006516 3.9e-08 61.6 71 39.4
Nitab4.5_0004123g0040 Nicotiana tabacum HOM05D008306 ORTHO05D004636 6.7e-08 60.8 75 33.3
Nitab4.5_0004734g0040 Nicotiana tabacum HOM05D000003 ORTHO05D000022 6.7e-08 60.8 76 39.5
Nitab4.5_0010000g0020 Nicotiana tabacum HOM05D008306 ORTHO05D004636 6.7e-08 60.8 38 65.8
Peaxi162Scf00100g00073 Petunia axillaris HOM05D008381 ORTHO05D004636 8.7e-08 60.5 82 36.6
TWI38G0333 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 1.1e-07 60.1 89 34.8
CAN.G459.19 Capsicum annuum HOM05D000010 ORTHO05D000063 1.9e-07 59.3 88 33.0
EL10Ac1g02234 Beta vulgaris HOM05D008685 ORTHO05D000022 3.3e-07 58.5 80 40.0
EL10Ac4g08331 Beta vulgaris HOM05D008685 ORTHO05D000022 3.3e-07 58.5 80 41.2
EL10Ac2g04336 Beta vulgaris HOM05D008685 ORTHO05D000022 4.3e-07 58.2 81 39.5
RcHm_v2.0_Chr5g0041481 Rosa chinensis HOM05D000279 ORTHO05D000498 4.3e-07 58.2 91 37.4
Nitab4.5_0002611g0080 Nicotiana tabacum HOM05D000003 ORTHO05D000022 7.4e-07 57.4 81 39.5
FvH4_4g01552 Fragaria vesca HOM05D000003 ORTHO05D006737 9.6e-07 57.0 88 34.1
Nitab4.5_0005874g0020 Nicotiana tabacum HOM05D008381 ORTHO05D004636 9.6e-07 57.0 61 37.7
SGA_v2.0_scaffold245G44722 Striga asiatica HOM05D000155 ORTHO05D000022 9.6e-07 57.0 61 45.9
Actinidia24692 Actinidia chinensis HOM05D000155 ORTHO05D000022 1.3e-06 56.6 76 36.8
FvH4_2g00211 Fragaria vesca HOM05D000003 ORTHO05D006737 1.3e-06 56.6 88 34.1
QL08p061842 Quercus lobata HOM05D000003 ORTHO05D000004 1.3e-06 56.6 81 35.8
RcHm_v2.0_Chr1g0314431 Rosa chinensis HOM05D000003 ORTHO05D006737 1.3e-06 56.6 80 37.5
PGSC0003DMG400033083 Solanum tuberosum HOM05D000003 ORTHO05D000022 1.3e-06 56.6 87 37.9
Actinidia31833 Actinidia chinensis HOM05D000155 ORTHO05D000022 1.6e-06 56.2 82 34.1
FvH4_3g23491 Fragaria vesca HOM05D000279 ORTHO05D000957 1.6e-06 56.2 82 40.2
SHI25431 Sapria himalayana HOM05D000024 ORTHO05D000022 1.6e-06 56.2 80 35.0
Ciclev10021474m.g Citrus clementina HOM05D000003 ORTHO05D000022 2.1e-06 55.8 80 36.2
EL10Ac6g13741 Beta vulgaris HOM05D008685 ORTHO05D000022 2.8e-06 55.5 80 36.2
FvH4_6g46881 Fragaria vesca HOM05D000003 ORTHO05D000022 2.8e-06 55.5 81 35.8
MBI04_g43365_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.8e-06 55.5 90 35.6
QL01p000475 Quercus lobata HOM05D000155 ORTHO05D000022 2.8e-06 55.5 82 37.8
QL01p000570 Quercus lobata HOM05D000155 ORTHO05D000022 2.8e-06 55.5 82 37.8
PGSC0003DMG400006521 Solanum tuberosum HOM05D008381 ORTHO05D004636 2.8e-06 55.5 68 36.8
Thecc.04G017600 Theobroma cacao HOM05D000285 ORTHO05D000241 2.8e-06 55.5 92 31.5
Nitab4.5_0007654g0020 Nicotiana tabacum HOM05D008381 ORTHO05D004636 3.7e-06 55.1 54 46.3
AUR62042608 Chenopodium quinoa HOM05D008685 ORTHO05D000022 4.8e-06 54.7 88 35.2
FvH4_5g27995 Fragaria vesca HOM05D000003 ORTHO05D000022 4.8e-06 54.7 94 33.0
MBI08_g15722_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 4.8e-06 54.7 81 33.3
FvH4_5g34262 Fragaria vesca HOM05D000003 ORTHO05D000022 6.2e-06 54.3 81 35.8
Nitab4.5_0000297g0200 Nicotiana tabacum HOM05D008381 ORTHO05D004636 6.2e-06 54.3 61 42.6
Nitab4.5_0001319g0020 Nicotiana tabacum HOM05D008381 ORTHO05D004636 6.2e-06 54.3 73 35.6
Nitab4.5_0026829g0010 Nicotiana tabacum HOM05D008306 ORTHO05D004636 6.2e-06 54.3 73 35.6
MBI01_g25635_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 8.2e-06 53.9 80 36.2
Nitab4.5_0002028g0020 Nicotiana tabacum HOM05D008381 ORTHO05D004636 8.2e-06 53.9 73 37.0
Nitab4.5_0011109g0020 Nicotiana tabacum HOM05D008306 ORTHO05D004636 8.2e-06 53.9 48 60.4
Peaxi162Scf00129g00613 Petunia axillaris HOM05D000003 ORTHO05D026350 8.2e-06 53.9 84 38.1


User provided reference genes

Program Settings