Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004507g0030 Nicotiana tabacum HOM05D007735 ORTHO05D009638 1.0e-60 236.5 117 100.0
Nitab4.5_0000304g0050 Nicotiana tabacum HOM05D007735 ORTHO05D009638 2.2e-42 175.6 93 93.5
Peaxi162Scf00918g00052 Petunia axillaris HOM05D007735 ORTHO05D009638 1.3e-39 166.4 135 67.4
PGSC0003DMG400013637 Solanum tuberosum HOM05D007735 ORTHO05D009638 4.0e-28 128.3 139 56.1
Sopen02g026900 Solanum pennellii HOM05D007735 ORTHO05D009638 7.5e-27 124.0 139 55.4
Solyc02g082240.1 Solanum lycopersicum HOM05D007735 ORTHO05D009638 4.9e-26 121.3 140 55.7
PGSC0003DMG400018690 Solanum tuberosum HOM05D007735 ORTHO05D009638 1.4e-25 119.8 128 57.8
Nitab4.5_0000855g0160 Nicotiana tabacum HOM05D007735 ORTHO05D009638 4.1e-25 118.2 140 55.0
Nitab4.5_0004448g0030 Nicotiana tabacum HOM05D007735 ORTHO05D009638 3.5e-24 115.2 142 53.5
Nitab4.5_0006309g0010 Nicotiana tabacum HOM05D007735 ORTHO05D009638 3.9e-23 111.7 131 49.6
Cc07_g12240 Coffea canephora HOM05D007735 ORTHO05D009638 2.7e-16 89.0 141 41.1
PGSC0003DMG400015147 Solanum tuberosum HOM05D007735 ORTHO05D009638 3.9e-15 85.1 116 44.8
Oeu045753.2 Olea europaea HOM05D007735 ORTHO05D009638 4.3e-14 81.6 129 39.5
QL06p053348 Quercus lobata HOM05D007735 ORTHO05D009638 3.1e-12 75.5 139 41.7
Manes.01G157700 Manihot esculenta HOM05D007735 ORTHO05D009638 5.2e-12 74.7 127 39.4
Cfa007115 Carpinus fangiana HOM05D007735 ORTHO05D009638 1.2e-11 73.6 138 37.7
Nn5g31061 Nelumbo nucifera HOM05D007735 ORTHO05D009638 1.5e-11 73.2 122 40.2
Oeu043409.2 Olea europaea HOM05D007735 ORTHO05D009638 1.5e-11 73.2 131 37.4
Thecc.01G001800 Theobroma cacao HOM05D007735 ORTHO05D009638 5.8e-11 71.2 146 37.7
CSS0025501 Camellia sinensis var. sinensis HOM05D007735 ORTHO05D009638 1.3e-10 70.1 118 41.5
CSS0016261 Camellia sinensis var. sinensis HOM05D007735 ORTHO05D009638 2.2e-10 69.3 111 40.5
Manes.02G117000 Manihot esculenta HOM05D007735 ORTHO05D009638 2.9e-10 68.9 131 39.7
ECA246G0225 Erigeron canadensis HOM05D007735 ORTHO05D009638 3.7e-10 68.6 121 38.0
Lsat_1_v5_gn_2_74220 Lactuca sativa HOM05D007735 ORTHO05D009638 4.1e-09 65.1 119 37.8
Lsat_1_v5_gn_3_69161 Lactuca sativa HOM05D007735 ORTHO05D009638 2.7e-08 62.4 121 37.2
Nn6g31607 Nelumbo nucifera HOM05D007735 ORTHO05D009638 2.7e-08 62.4 131 33.6
TAR381G1223 Trochodendron aralioides HOM05D007735 ORTHO05D009638 2.7e-08 62.4 124 37.1
Nitab4.5_0000235g0170 Nicotiana tabacum HOM05D007735 ORTHO05D009638 4.6e-08 61.6 85 44.7
DCAR_014121 Daucus carota HOM05D007735 ORTHO05D009638 7.8e-08 60.8 114 37.7
DCAR_014122 Daucus carota HOM05D007735 ORTHO05D009638 7.8e-08 60.8 114 37.7
Potri.011G145200 Populus trichocarpa HOM05D007735 ORTHO05D009638 1.7e-07 59.7 138 34.8
Prupe.7G187700 Prunus persica HOM05D007735 ORTHO05D009638 6.6e-07 57.8 141 33.3
Sc03g0004120 Simmondsia chinensis HOM05D007735 ORTHO05D009638 6.6e-07 57.8 117 35.9
VMungo1215G0699 Vigna mungo HOM05D007735 ORTHO05D009638 6.6e-07 57.8 127 34.6
Lalb_Chr05g0214991 Lupinus albus HOM05D007735 ORTHO05D009638 3.3e-06 55.5 112 37.5
Phvul.002G119100 Phaseolus vulgaris HOM05D007735 ORTHO05D009638 5.6e-06 54.7 126 34.1
Glyma.01G156500 Glycine max HOM05D007735 ORTHO05D009638 7.3e-06 54.3 126 38.1
Glyma.16G114400 Glycine max HOM05D007735 ORTHO05D009638 9.5e-06 53.9 145 33.1
TPR.G19311 Trifolium pratense HOM05D007735 ORTHO05D009638 9.5e-06 53.9 125 34.4


User provided reference genes

Program Settings