Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004497g0030 Nicotiana tabacum HOM05D000045 ORTHO05D011303 1.1e-56 223.0 109 100.0
Nitab4.5_0003719g0040 Nicotiana tabacum HOM05D000045 ORTHO05D001346 8.3e-28 127.1 94 70.2
Peaxi162Scf00071g02210 Petunia axillaris HOM05D000045 ORTHO05D001346 8.3e-28 127.1 94 70.2
Peaxi162Scf00035g00514 Petunia axillaris HOM05D000045 ORTHO05D001346 1.4e-22 109.8 95 62.1
Peaxi162Scf00204g00057 Petunia axillaris HOM05D000045 ORTHO05D001346 1.2e-21 106.7 95 62.1
Nitab4.5_0001639g0130 Nicotiana tabacum HOM05D000045 ORTHO05D001346 4.1e-19 98.2 94 56.4
Hma1.2p1_1324F.1_g275680 Hydrangea macrophylla HOM05D000045 ORTHO05D001346 1.2e-18 96.7 94 53.2
Nitab4.5_0002058g0060 Nicotiana tabacum HOM05D000045 ORTHO05D001346 8.6e-17 90.5 94 54.3
Lj4g0011792 Lotus japonicus HOM05D000045 ORTHO05D001346 2.1e-15 85.9 92 52.2
TPR.G21798 Trifolium pratense HOM05D000045 ORTHO05D001346 2.6e-13 79.0 94 47.9
TPR.G36419 Trifolium pratense HOM05D000045 ORTHO05D001346 4.4e-13 78.2 94 45.7
Nitab4.5_0008686g0050 Nicotiana tabacum HOM05D010342 ORTHO05D011303 6.4e-12 74.3 47 74.5
Nitab4.5_0000715g0100 Nicotiana tabacum HOM05D000045 ORTHO05D011303 1.4e-11 73.2 86 52.3
PSO675G0631 Papaver somniferum HOM05D000045 ORTHO05D001346 4.1e-11 71.6 91 42.9
Haze_07002 Corylus avellana HOM05D000045 ORTHO05D001346 3.5e-10 68.6 89 38.2
Potri.014G167000 Populus trichocarpa HOM05D000045 ORTHO05D001346 4.6e-10 68.2 90 37.8
QL08p028000 Quercus lobata HOM05D000045 ORTHO05D001346 4.6e-10 68.2 90 38.9
Lj5A281T52 Lonicera japonica HOM05D000045 ORTHO05D001346 6.0e-10 67.8 91 37.4
CiPaw.03G281300 Carya illinoinensis HOM05D000045 ORTHO05D001346 7.8e-10 67.4 90 35.6
Duzib268G0773 Durio zibethinus HOM05D000045 ORTHO05D001346 7.8e-10 67.4 90 37.8
Sabra14G0127000 Salix brachista HOM05D000045 ORTHO05D001346 7.8e-10 67.4 89 39.3
Phvul.006G140500 Phaseolus vulgaris HOM05D000045 ORTHO05D001346 1.0e-09 67.0 89 39.3
Thecc.04G196700 Theobroma cacao HOM05D000045 ORTHO05D001346 1.3e-09 66.6 90 36.7
Dinv21295 Davidia involucrata HOM05D000045 ORTHO05D001346 1.7e-09 66.2 90 36.7
Eucgr.H00883 Eucalyptus grandis HOM05D000045 ORTHO05D001346 1.7e-09 66.2 90 34.4
Nitab4.5_0001057g0060 Nicotiana tabacum HOM05D000045 ORTHO05D001346 1.7e-09 66.2 91 37.4
Atru.chr6.3385 Acer truncatum HOM05D000045 ORTHO05D001346 2.3e-09 65.9 90 37.8
CiPaw.09G107400 Carya illinoinensis HOM05D000045 ORTHO05D001346 2.3e-09 65.9 89 38.2
COL.COLO4_31922 Corchorus olitorius HOM05D000045 ORTHO05D001346 2.3e-09 65.9 89 33.7
Haze_12633 Corylus avellana HOM05D000045 ORTHO05D001346 2.3e-09 65.9 90 36.7
ECA234G0373 Erigeron canadensis HOM05D000045 ORTHO05D001346 2.3e-09 65.9 97 34.0
Manes.07G106900 Manihot esculenta HOM05D000045 ORTHO05D001346 2.3e-09 65.9 91 36.3
Nn4g24595 Nelumbo nucifera HOM05D000045 ORTHO05D001346 2.3e-09 65.9 92 37.0
Sed0007669 Sechium edule HOM05D000045 ORTHO05D001346 3.0e-09 65.5 87 36.8
GSVIVG01030079001 Vitis vinifera HOM05D000918 ORTHO05D001346 3.0e-09 65.5 91 35.2
MELO3C028685.2 Cucumis melo HOM05D000045 ORTHO05D001346 3.9e-09 65.1 87 40.2
Dinv26611 Davidia involucrata HOM05D000045 ORTHO05D001346 3.9e-09 65.1 90 36.7
Migut.B00731 Erythranthe guttata HOM05D000045 ORTHO05D001346 3.9e-09 65.1 95 32.6
HanXRQChr10g0294671 Helianthus annuus HOM05D000045 ORTHO05D001346 3.9e-09 65.1 91 35.2
Peaxi162Scf00011g01634 Petunia axillaris HOM05D000045 ORTHO05D001346 3.9e-09 65.1 91 37.4
QL05p068158 Quercus lobata HOM05D000045 ORTHO05D001346 3.9e-09 65.1 89 36.0
Ah.02g128360 Amaranthus hybridus HOM05D000045 ORTHO05D001346 5.0e-09 64.7 90 36.7
Aqoxy3G01512 Aquilegia oxysepala HOM05D000045 ORTHO05D001346 5.0e-09 64.7 91 37.4
CAN.G855.37 Capsicum annuum HOM05D000045 ORTHO05D001346 6.6e-09 64.3 91 36.3
Nitab4.5_0001129g0080 Nicotiana tabacum HOM05D000045 ORTHO05D001346 6.6e-09 64.3 90 36.7
Prupe.3G198400 Prunus persica HOM05D000045 ORTHO05D001346 6.6e-09 64.3 90 35.6
TAR627G0501 Trochodendron aralioides HOM05D000045 ORTHO05D001346 6.6e-09 64.3 90 36.7
Eucgr.G00085 Eucalyptus grandis HOM05D000045 ORTHO05D001346 8.6e-09 63.9 90 36.7
Sed0027343 Sechium edule HOM05D000045 ORTHO05D001346 8.6e-09 63.9 90 34.4
CSS0035244 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D001346 1.1e-08 63.5 90 36.7
MBI06_g32163_MAGBIO Magnolia biondii HOM05D000045 ORTHO05D001346 1.1e-08 63.5 94 34.0
Manes.13G062100 Manihot esculenta HOM05D000045 ORTHO05D001346 1.1e-08 63.5 90 37.8
GSVIVG01003485001 Vitis vinifera HOM05D000045 ORTHO05D001346 1.1e-08 63.5 89 36.0
Actinidia00157 Actinidia chinensis HOM05D000045 ORTHO05D001346 1.5e-08 63.2 90 35.6
Dinv29667 Davidia involucrata HOM05D000045 ORTHO05D001346 1.5e-08 63.2 90 35.6
MBI17_g43197_MAGBIO Magnolia biondii HOM05D000045 ORTHO05D001346 1.5e-08 63.2 94 38.3
Sopen01g045590 Solanum pennellii HOM05D000045 ORTHO05D001346 1.5e-08 63.2 91 35.2
AUR62032468 Chenopodium quinoa HOM05D000045 ORTHO05D001346 1.9e-08 62.8 90 36.7
PSO541G6266 Papaver somniferum HOM05D000045 ORTHO05D001346 1.9e-08 62.8 91 36.3
RcHm_v2.0_Chr7g0219621 Rosa chinensis HOM05D000045 ORTHO05D001346 1.9e-08 62.8 90 34.4
Solyc01g103180.4 Solanum lycopersicum HOM05D000045 ORTHO05D001346 1.9e-08 62.8 91 35.2
VMungo0540G0282 Vigna mungo HOM05D000045 ORTHO05D001346 1.9e-08 62.8 89 36.0
EL10Ac6g14028 Beta vulgaris HOM05D000045 ORTHO05D001346 2.5e-08 62.4 90 35.6
AUR62017439 Chenopodium quinoa HOM05D000045 ORTHO05D001346 2.5e-08 62.4 90 36.7
AUR62029102 Chenopodium quinoa HOM05D000045 ORTHO05D001346 2.5e-08 62.4 92 31.5
RcHm_v2.0_Chr2g0156141 Rosa chinensis HOM05D000045 ORTHO05D001346 2.5e-08 62.4 90 35.6
MD09G1126200 Malus domestica HOM05D000045 ORTHO05D001346 3.3e-08 62.0 90 34.4
TWI73G0746 Tripterygium wilfordii HOM05D000045 ORTHO05D001346 3.3e-08 62.0 91 35.2
ClCG02G002840 Citrullus lanatus HOM05D000045 ORTHO05D001346 4.3e-08 61.6 87 36.8
COL.COLO4_20212 Corchorus olitorius HOM05D000045 ORTHO05D001346 4.3e-08 61.6 90 33.3
CsaV3_5G014020 Cucumis sativus L. HOM05D000045 ORTHO05D001346 4.3e-08 61.6 90 33.3
CsaV3_6G048310 Cucumis sativus L. HOM05D000045 ORTHO05D001346 4.3e-08 61.6 87 33.3
PSO761G0468 Papaver somniferum HOM05D000045 ORTHO05D001346 4.3e-08 61.6 109 32.1
PGR042G0951 Punica granatum HOM05D000045 ORTHO05D001346 4.3e-08 61.6 94 33.0
GSVIVG01023200001 Vitis vinifera HOM05D000045 ORTHO05D001346 4.3e-08 61.6 90 35.6
Hma1.2p1_0545F.1_g175960 Hydrangea macrophylla HOM05D000045 ORTHO05D001346 5.6e-08 61.2 90 32.2
Lj1C796G8 Lonicera japonica HOM05D000045 ORTHO05D001346 5.6e-08 61.2 90 34.4
PSO675G8894 Papaver somniferum HOM05D000045 ORTHO05D001346 5.6e-08 61.2 91 37.4
Lalb_Chr20g0121001 Lupinus albus HOM05D000045 ORTHO05D001346 7.3e-08 60.8 92 35.9
MD09G1270100 Malus domestica HOM05D000045 ORTHO05D001346 7.3e-08 60.8 90 34.4
PSO210G2335 Papaver somniferum HOM05D000045 ORTHO05D001346 7.3e-08 60.8 109 31.2
CSS0027308 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D001346 9.5e-08 60.5 90 35.6
CSS0031139 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D001346 9.5e-08 60.5 90 35.6
CiPaw.06G176100 Carya illinoinensis HOM05D000045 ORTHO05D001346 9.5e-08 60.5 90 34.4
ClCG01G021300 Citrullus lanatus HOM05D000045 ORTHO05D001346 9.5e-08 60.5 87 33.3
Prupe.1G583000 Prunus persica HOM05D000045 ORTHO05D001346 9.5e-08 60.5 90 33.3
FvH4_6g40691 Fragaria vesca HOM05D000045 ORTHO05D001346 1.2e-07 60.1 90 34.4
Nitab4.5_0000540g0240 Nicotiana tabacum HOM05D000045 ORTHO05D011303 1.2e-07 60.1 49 61.2
TPR.G10574 Trifolium pratense HOM05D000045 ORTHO05D001346 1.2e-07 60.1 89 32.6
Actinidia09788 Actinidia chinensis HOM05D000045 ORTHO05D001346 1.6e-07 59.7 92 34.8
Ah.01g002620 Amaranthus hybridus HOM05D000045 ORTHO05D001346 1.6e-07 59.7 90 31.1
Haze_10008 Corylus avellana HOM05D000045 ORTHO05D001346 1.6e-07 59.7 89 34.8
Peaxi162Scf00001g00283 Petunia axillaris HOM05D000045 ORTHO05D001346 1.6e-07 59.7 94 34.0
Psat1g173360 Pisum sativum HOM05D000045 ORTHO05D001346 1.6e-07 59.7 89 30.3
TWI18G0243 Tripterygium wilfordii HOM05D000045 ORTHO05D001346 1.6e-07 59.7 90 34.4
vmacro01687 Vaccinium macrocarpon HOM05D000045 ORTHO05D001346 1.6e-07 59.7 89 33.7
arahy.Tifrunner.gnm1.ann1.DC1LDI Arachis hypogaea HOM05D000045 ORTHO05D001346 2.1e-07 59.3 109 33.0
CANSAT54G0548 Cannabis sativa HOM05D000045 ORTHO05D001346 2.1e-07 59.3 89 36.0
CDE02G1527 Ceratophyllum demersum HOM05D000045 ORTHO05D001346 2.1e-07 59.3 94 31.9
CsaV3_7G002550 Cucumis sativus L. HOM05D000045 ORTHO05D001346 2.1e-07 59.3 87 36.8
Gohir.D02G113500 Gossypium hirsutum HOM05D000045 ORTHO05D001346 2.1e-07 59.3 90 34.4
Gorai.005G129200 Gossypium raimondii HOM05D000045 ORTHO05D001346 2.1e-07 59.3 90 34.4
Phvul.009G253800 Phaseolus vulgaris HOM05D000045 ORTHO05D001346 2.1e-07 59.3 92 34.8
VMungo1309G2873 Vigna mungo HOM05D000045 ORTHO05D001346 2.1e-07 59.3 92 33.7
AUR62002424 Chenopodium quinoa HOM05D000045 ORTHO05D001346 2.8e-07 58.9 89 31.5
THA.LOC104819036 Tarenaya hassleriana HOM05D000045 ORTHO05D001346 2.8e-07 58.9 90 32.2
vmacro12086 Vaccinium macrocarpon HOM05D000045 ORTHO05D001346 2.8e-07 58.9 90 33.3
Ca_00751_v3 Cicer arietinum L. HOM05D000045 ORTHO05D001346 3.6e-07 58.5 89 32.6
Lj6g0025848 Lotus japonicus HOM05D000045 ORTHO05D001346 3.6e-07 58.5 90 33.3
Nitab4.5_0001818g0060 Nicotiana tabacum HOM05D000045 ORTHO05D001346 3.6e-07 58.5 56 62.5
Nitab4.5_0001867g0050 Nicotiana tabacum HOM05D000045 ORTHO05D001346 4.7e-07 58.2 89 33.7
arahy.Tifrunner.gnm1.ann1.BDP107 Arachis hypogaea HOM05D000045 ORTHO05D001346 6.2e-07 57.8 109 32.1
Ciclev10014481m.g Citrus clementina HOM05D000045 ORTHO05D001346 6.2e-07 57.8 90 34.4
FAN14G4585 Fragaria x ananassa HOM05D000045 ORTHO05D001346 6.2e-07 57.8 90 33.3
EL10Ac9g22684 Beta vulgaris HOM05D000045 ORTHO05D001346 8.0e-07 57.4 90 31.1
Solyc07g045520.4 Solanum lycopersicum HOM05D000045 ORTHO05D001346 8.0e-07 57.4 90 28.9
Solyc09g075640.4 Solanum lycopersicum HOM05D000045 ORTHO05D001346 8.0e-07 57.4 94 31.9
Eucgr.D01451 Eucalyptus grandis HOM05D000045 ORTHO05D001346 1.1e-06 57.0 86 31.4
Aqoxy1G04241 Aquilegia oxysepala HOM05D000045 ORTHO05D001346 1.4e-06 56.6 91 36.3
Nitab4.5_0000683g0050 Nicotiana tabacum HOM05D000045 ORTHO05D011303 1.4e-06 56.6 40 65.0
PGR044G0187 Punica granatum HOM05D000045 ORTHO05D001346 1.4e-06 56.6 95 33.7
C02p57720 Brassica napus HOM05D000045 ORTHO05D001346 1.8e-06 56.2 90 31.1
CANSAT54G1031 Cannabis sativa HOM05D000045 ORTHO05D001346 1.8e-06 56.2 89 33.7
Gorai.010G189600 Gossypium raimondii HOM05D000045 ORTHO05D001346 1.8e-06 56.2 91 31.9
Lj6g0006221 Lotus japonicus HOM05D000045 ORTHO05D001346 1.8e-06 56.2 92 32.6
Prupe.1G125700 Prunus persica HOM05D000045 ORTHO05D001346 1.8e-06 56.2 92 31.5
A02p38390 Brassica napus HOM05D000045 ORTHO05D001346 2.3e-06 55.8 90 31.1
BraA02t08818Z Brassica rapa HOM05D000045 ORTHO05D001346 2.3e-06 55.8 90 31.1
Glyma.09G039300 Glycine max HOM05D000045 ORTHO05D001346 2.3e-06 55.8 92 32.6
Nitab4.5_0000683g0040 Nicotiana tabacum HOM05D000045 ORTHO05D001346 2.3e-06 55.8 35 77.1
PSO210G2239 Papaver somniferum HOM05D000045 ORTHO05D001346 2.3e-06 55.8 97 32.0
Peaxi162Scf00802g00233 Petunia axillaris HOM05D000045 ORTHO05D001346 2.3e-06 55.8 90 30.0
Potri.016G007300 Populus trichocarpa HOM05D000045 ORTHO05D001346 2.3e-06 55.8 87 34.5
Rhsim06G0176200 Rhododendron simsii HOM05D000045 ORTHO05D001346 2.3e-06 55.8 91 31.9
MSTRG.16044 Avicennia marina HOM05D000045 ORTHO05D001346 3.1e-06 55.5 86 29.1
MSTRG.17391 Avicennia marina HOM05D000045 ORTHO05D001346 3.1e-06 55.5 94 30.9
Glyma.15G144500 Glycine max HOM05D000045 ORTHO05D001346 3.1e-06 55.5 92 34.8
Gohir.D06G162400 Gossypium hirsutum HOM05D000045 ORTHO05D001346 4.0e-06 55.1 91 30.8
Peaxi162Scf00150g00126 Petunia axillaris HOM05D000045 ORTHO05D001346 4.0e-06 55.1 51 58.8
Sopen07g024050 Solanum pennellii HOM05D000045 ORTHO05D001346 4.0e-06 55.1 90 27.8
RcHm_v2.0_Chr4g0424281 Rosa chinensis HOM05D000045 ORTHO05D001346 5.2e-06 54.7 83 36.1
Thecc.04G294900 Theobroma cacao HOM05D000045 ORTHO05D001346 5.2e-06 54.7 92 31.5
vmacro15733 Vaccinium macrocarpon HOM05D000045 ORTHO05D001346 5.2e-06 54.7 92 29.3
CSS0044022 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D001346 6.8e-06 54.3 93 30.1
CARHR185140 Cardamine hirsuta HOM05D000045 ORTHO05D001346 6.8e-06 54.3 91 30.8
Duzib151G0801 Durio zibethinus HOM05D000045 ORTHO05D001346 6.8e-06 54.3 92 31.5
Gohir.A06G156100 Gossypium hirsutum HOM05D000045 ORTHO05D001346 6.8e-06 54.3 91 30.8
Nn3g21620 Nelumbo nucifera HOM05D000045 ORTHO05D001346 6.8e-06 54.3 82 36.6
Peaxi162Scf00957g00236 Petunia axillaris HOM05D000045 ORTHO05D001346 6.8e-06 54.3 36 69.4
Aa31LG1G4400 Aethionema arabicum HOM05D000045 ORTHO05D001346 8.9e-06 53.9 90 30.0


User provided reference genes

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