Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004490g0050 Nicotiana tabacum HOM05D001312 ORTHO05D008018 1.3e-274 949.1 472 100.0
Nitab4.5_0000132g0320 Nicotiana tabacum HOM05D001312 ORTHO05D008018 2.0e-240 835.5 469 90.6
PGSC0003DMG400028176 Solanum tuberosum HOM05D001312 ORTHO05D008018 5.0e-223 777.7 471 83.9
Solyc10g083710.2 Solanum lycopersicum HOM05D001312 ORTHO05D008018 5.8e-211 737.6 472 79.7
Peaxi162Scf00110g01214 Petunia axillaris HOM05D001312 ORTHO05D008018 3.1e-196 688.7 492 74.0
CSS0027895 Camellia sinensis var. sinensis HOM05D001312 ORTHO05D008018 1.0e-183 647.1 471 67.9
CSS0009438 Camellia sinensis var. sinensis HOM05D001312 ORTHO05D008018 5.6e-182 641.3 471 67.5
vmacro07336 Vaccinium macrocarpon HOM05D001312 ORTHO05D008018 1.0e-175 620.5 471 66.0
Actinidia39872 Actinidia chinensis HOM05D001312 ORTHO05D008018 9.0e-172 607.4 470 65.5
Cc06_g05050 Coffea canephora HOM05D001312 ORTHO05D008018 2.6e-171 605.9 464 67.2
MSTRG.5801 Avicennia marina HOM05D001312 ORTHO05D008018 4.5e-171 605.1 465 65.2
Thecc.05G079000 Theobroma cacao HOM05D001312 ORTHO05D008018 2.9e-170 602.4 467 64.5
FAN05G3053 Fragaria x ananassa HOM05D001312 ORTHO05D008018 5.0e-170 601.7 471 64.8
Migut.J00495 Erythranthe guttata HOM05D001312 ORTHO05D008018 6.5e-170 601.3 465 64.3
TAR633G1314 Trochodendron aralioides HOM05D001312 ORTHO05D001832 8.5e-170 600.9 466 64.4
FAN05G0775 Fragaria x ananassa HOM05D001312 ORTHO05D008018 1.4e-169 600.1 471 64.5
FvH4_6g17520 Fragaria vesca HOM05D001312 ORTHO05D008018 3.2e-169 599.0 471 64.5
FAN14G3191 Fragaria x ananassa HOM05D001312 ORTHO05D008018 1.0e-167 594.0 488 62.9
RcHm_v2.0_Chr3g0471781 Rosa chinensis HOM05D001312 ORTHO05D008018 3.3e-166 589.0 470 63.8
Rhsim03G0083100 Rhododendron simsii HOM05D001312 ORTHO05D008018 6.3e-165 584.7 442 65.6
Lj3A1005G38 Lonicera japonica HOM05D001312 ORTHO05D008018 3.1e-164 582.4 517 59.4
TWI53G1380 Tripterygium wilfordii HOM05D001312 ORTHO05D008018 9.1e-164 580.9 467 61.7
Potri.016G095900 Populus trichocarpa HOM05D001312 ORTHO05D008018 1.2e-163 580.5 466 63.3
FAN09G2766 Fragaria x ananassa HOM05D001312 ORTHO05D008018 1.5e-163 580.1 490 61.2
MD14G1093900 Malus domestica HOM05D001312 ORTHO05D008018 4.5e-163 578.6 471 61.8
Gohir.D04G105500 Gossypium hirsutum HOM05D001312 ORTHO05D008018 1.0e-162 577.4 465 63.0
Gorai.009G409200 Gossypium raimondii HOM05D001312 ORTHO05D008018 1.3e-162 577.0 465 63.0
SalBow3G2703 Salvia bowleyana HOM05D001312 ORTHO05D008018 1.3e-162 577.0 467 62.5
Aqoxy1G00967 Aquilegia oxysepala HOM05D001312 ORTHO05D008018 1.1e-161 573.9 471 62.0
COL.COLO4_22294 Corchorus olitorius HOM05D001312 ORTHO05D008018 7.2e-161 571.2 466 62.7
Lsat_1_v5_gn_1_50640 Lactuca sativa HOM05D001312 ORTHO05D008018 2.7e-160 569.3 466 62.2
FAN02G1263 Fragaria x ananassa HOM05D001312 ORTHO05D008018 3.0e-159 565.8 471 61.8
ECA248G1880 Erigeron canadensis HOM05D001312 ORTHO05D008018 3.9e-159 565.5 465 61.5
Oeu039841.2 Olea europaea HOM05D001312 ORTHO05D008018 3.9e-159 565.5 596 52.7
CANSAT80G2114 Cannabis sativa HOM05D001312 ORTHO05D008018 1.5e-158 563.5 471 61.8
Cpa.g.sc5.99 Carica papaya HOM05D001312 ORTHO05D008018 4.4e-158 562.0 463 62.2
CiPaw.10G004200 Carya illinoinensis HOM05D001312 ORTHO05D008018 9.7e-158 560.8 467 60.8
HanXRQChr01g0028401 Helianthus annuus HOM05D001312 ORTHO05D008018 6.9e-156 554.7 463 60.9
PSO063G2793 Papaver somniferum HOM05D001312 ORTHO05D008018 1.2e-155 553.9 499 55.1
PSO339G3022 Papaver somniferum HOM05D001312 ORTHO05D008018 3.4e-155 552.4 458 59.0
Eucgr.A01566 Eucalyptus grandis HOM05D001312 ORTHO05D008018 4.5e-155 552.0 463 59.2
Sabra16G0101200 Salix brachista HOM05D001312 ORTHO05D008018 3.8e-154 548.9 550 53.6
Sed0012062 Sechium edule HOM05D001312 ORTHO05D008018 2.5e-153 546.2 469 58.6
CsaV3_6G040350 Cucumis sativus L. HOM05D001312 ORTHO05D008018 4.2e-153 545.4 469 58.4
Dinv35859 Davidia involucrata HOM05D001312 ORTHO05D008018 5.5e-153 545.0 391 69.3
ClCG04G009690 Citrullus lanatus HOM05D001312 ORTHO05D008018 1.2e-152 543.9 469 58.8
TPR.G5684 Trifolium pratense HOM05D001312 ORTHO05D008018 2.7e-152 542.7 463 58.5
SGA_v2.0_scaffold40G15429 Striga asiatica HOM05D001312 ORTHO05D008018 1.8e-151 540.0 475 58.7
VMungo0720G0477 Vigna mungo HOM05D001312 ORTHO05D008018 1.8e-151 540.0 463 60.9
Glyma.10G065300 Glycine max HOM05D001312 ORTHO05D008018 3.9e-151 538.9 463 60.3
arahy.Tifrunner.gnm1.ann1.42C0B0 Arachis hypogaea HOM05D001312 ORTHO05D008018 5.2e-151 538.5 463 60.0
arahy.Tifrunner.gnm1.ann1.C1UQYX Arachis hypogaea HOM05D001312 ORTHO05D008018 5.2e-151 538.5 463 60.0
BcaC06g32083 Brassica carinata HOM05D001312 ORTHO05D008018 5.2e-151 538.5 465 57.6
QL07p040881 Quercus lobata HOM05D001312 ORTHO05D008018 5.2e-151 538.5 538 53.5
Phvul.007G224100 Phaseolus vulgaris HOM05D001312 ORTHO05D008018 5.7e-150 535.0 463 60.0
Nn6g35083 Nelumbo nucifera HOM05D001312 ORTHO05D008018 2.8e-149 532.7 465 59.1
Sc02g0001220 Simmondsia chinensis HOM05D001312 ORTHO05D008018 2.8e-149 532.7 416 63.5
GSVIVG01033751001 Vitis vinifera HOM05D001312 ORTHO05D008018 6.3e-149 531.6 411 63.7
Lj5g0006635 Lotus japonicus HOM05D001312 ORTHO05D008018 1.8e-148 530.0 465 59.8
Thhalv10013569m.g Eutrema salsugineum HOM05D001312 ORTHO05D008018 2.4e-148 529.6 465 57.6
Medtr1g061560 Medicago truncatula HOM05D001312 ORTHO05D008018 9.1e-148 527.7 466 58.2
AL6G13310 Arabidopsis lyrata HOM05D001312 ORTHO05D008018 1.6e-147 526.9 463 58.1
A10p32330 Brassica napus HOM05D001312 ORTHO05D008018 7.7e-147 524.6 466 57.1
BraA10t45274Z Brassica rapa HOM05D001312 ORTHO05D008018 7.7e-147 524.6 466 57.1
C09p73160 Brassica napus HOM05D001312 ORTHO05D008018 1.7e-146 523.5 466 57.3
Carub.0006s0268 Capsella rubella HOM05D001312 ORTHO05D008018 1.7e-146 523.5 468 56.6
Sp6g38960 Schrenkiella parvula HOM05D001312 ORTHO05D008018 3.8e-146 522.3 465 57.6
AT5G03770 Arabidopsis thaliana HOM05D001312 ORTHO05D008018 8.5e-146 521.2 463 57.2
Manes.08G018900 Manihot esculenta HOM05D001312 ORTHO05D008018 8.5e-146 521.2 409 63.3
BolC9t60051H Brassica oleracea HOM05D001312 ORTHO05D008018 3.2e-145 519.2 466 57.1
EL10Ac7g16768 Beta vulgaris HOM05D001312 ORTHO05D008018 5.5e-145 518.5 466 56.0
Atru.BG.216.p Acer truncatum HOM05D001312 ORTHO05D008018 9.4e-145 517.7 459 60.1
THA.LOC104816378 Tarenaya hassleriana HOM05D001312 ORTHO05D008018 1.6e-144 516.9 468 57.5
Gohir.A04G066728 Gossypium hirsutum HOM05D001312 ORTHO05D008018 3.6e-144 515.8 411 64.5
MELO3C024510.2 Cucumis melo HOM05D001312 ORTHO05D008018 4.0e-143 512.3 416 61.1
ATR0820G168 Amborella trichopoda HOM05D001312 ORTHO05D008018 4.8e-141 505.4 470 55.5
Haze_19515 Corylus avellana HOM05D001312 ORTHO05D008018 1.6e-139 500.4 467 55.7
SEGI_32755 Sequoiadendron giganteum HOM05D001312 ORTHO05D008018 4.7e-136 488.8 458 54.6
unitig_744.g24689 Utricularia gibba HOM05D001312 ORTHO05D008018 4.2e-129 465.7 451 54.1
Ca_11617_v3 Cicer arietinum L. HOM05D001312 ORTHO05D008018 2.1e-128 463.4 441 55.8
Zm00001eb147410 Zea mays HOM05D001312 ORTHO05D008018 1.0e-127 461.1 458 51.1
CiPaw.09G007400 Carya illinoinensis HOM05D001312 ORTHO05D008018 8.9e-127 458.0 398 60.1
Atru.chr8.1664 Acer truncatum HOM05D001312 ORTHO05D008018 8.6e-122 441.4 347 63.7
Ah.15g091190 Amaranthus hybridus HOM05D001312 ORTHO05D008018 1.5e-118 430.6 418 54.8
Hma1.2p1_0651F.1_g195720 Hydrangea macrophylla HOM05D001312 ORTHO05D008018 9.2e-116 421.4 353 62.0
Prupe.7G120300 Prunus persica HOM05D001312 ORTHO05D008018 5.6e-113 412.1 350 61.1
SMO364G0357 Selaginella moellendorffii HOM05D001312 ORTHO05D008018 9.8e-110 401.4 455 46.6
Aa31LG1G21490 Aethionema arabicum HOM05D001312 ORTHO05D008018 6.4e-109 398.7 437 49.9
Pp3c21_8090 Physcomitrium patens HOM05D001312 ORTHO05D008018 1.3e-106 391.0 458 43.9
MBI01_g23067_MAGBIO Magnolia biondii HOM05D001312 ORTHO05D008018 1.6e-104 384.0 317 60.3
DCAR_015029 Daucus carota HOM05D001312 ORTHO05D008018 4.1e-100 369.4 342 57.6
AagrBONN_evm.TU.Sc2ySwM_344.3661 Anthoceros agrestis HOM05D001312 ORTHO05D008018 9.2e-100 368.2 460 44.1
CARHR209530 Cardamine hirsuta HOM05D001312 ORTHO05D008018 1.2e-96 357.8 316 56.3
Mapoly0002s0209 Marchantia polymorpha HOM05D001312 ORTHO05D008018 8.1e-96 355.1 464 42.9
Ciclev10032390m.g Citrus clementina HOM05D001312 ORTHO05D008018 7.8e-91 338.6 280 60.7
Psat6g076240 Pisum sativum HOM05D001312 ORTHO05D008018 3.9e-90 336.3 309 58.3
CBR_g874 Chara braunii HOM05D001312 ORTHO05D008018 1.7e-82 310.8 388 45.1
Sopen10g033180 Solanum pennellii HOM05D001312 ORTHO05D008018 2.3e-82 310.5 184 84.8
Hund20444 Selenicereus undatus HOM05D001312 ORTHO05D008018 4.8e-80 302.8 318 53.1
Os01g0857300 Oryza sativa ssp. japonica HOM05D001312 ORTHO05D008018 1.1e-55 221.9 190 56.8
AUR62037894 Chenopodium quinoa HOM05D001312 ORTHO05D008018 1.8e-55 221.1 314 43.0
MBI01_g48091_MAGBIO Magnolia biondii HOM05D001312 ORTHO05D008018 3.7e-48 196.8 150 63.3
Lalb_Chr21g0315421 Lupinus albus HOM05D001312 ORTHO05D008018 5.3e-47 193.0 149 65.8
AUR62033601 Chenopodium quinoa HOM05D001312 ORTHO05D008018 1.7e-45 188.0 334 36.8
Ciclev10013092m.g Citrus clementina HOM05D001312 ORTHO05D008018 5.5e-44 183.0 132 72.0
HPP92_006796 Vanilla planifolia HOM05D001312 ORTHO05D008018 3.6e-43 180.3 361 33.5
HPP92_006792 Vanilla planifolia HOM05D001312 ORTHO05D008018 2.0e-41 174.5 198 46.5
DCAR_015030 Daucus carota HOM05D001312 ORTHO05D008018 1.1e-36 158.7 96 74.0
Lalb_Chr21g0315431 Lupinus albus HOM05D001312 ORTHO05D008018 1.4e-36 158.3 183 48.6
Glyma.13G150200 Glycine max HOM05D001312 ORTHO05D008018 3.2e-36 157.1 141 58.9
CARHR208850 Cardamine hirsuta HOM05D001312 ORTHO05D008018 4.4e-33 146.7 129 55.0
Lalb_Chr21g0315441 Lupinus albus HOM05D001312 ORTHO05D008018 5.7e-33 146.4 93 74.2
arahy.Tifrunner.gnm1.ann1.IWGZ26 Arachis hypogaea HOM05D001312 ORTHO05D008018 1.6e-30 138.3 176 44.9
Zm00001eb059120 Zea mays HOM05D000212 ORTHO05D008018 2.7e-27 127.5 95 58.9
CARHR208860 Cardamine hirsuta HOM05D001312 ORTHO05D008018 6.8e-26 122.9 91 67.0
Cre13.g583100 Chlamydomonas reinhardtii HOM05D001312 ORTHO05D008018 2.2e-24 117.9 399 27.6
VMungo0251G1834 Vigna mungo HOM05D001312 ORTHO05D008018 4.2e-12 77.0 50 66.0
Zm00001eb059130 Zea mays HOM05D000212 ORTHO05D002824 2.8e-11 74.3 55 61.8
arahy.Tifrunner.gnm1.ann1.UHL2QJ Arachis hypogaea HOM05D000705 ORTHO05D008018 1.2e-09 68.9 186 25.8
Zm00001eb009840 Zea mays HOM05D001312 ORTHO05D008018 2.0e-09 68.2 63 47.6
A03p01370 Brassica napus HOM05D001312 ORTHO05D008018 1.4e-07 62.0 69 47.8
C03p01710 Brassica napus HOM05D001312 ORTHO05D008018 9.2e-07 59.3 68 50.0
BolC3t12726H Brassica oleracea HOM05D001312 ORTHO05D008018 9.2e-07 59.3 68 50.0


User provided reference genes

Program Settings