Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004487g0010 Nicotiana tabacum HOM05D006536 ORTHO05D005877 1.3e-60 236.5 142 100.0
Nitab4.5_0000397g0170 Nicotiana tabacum HOM05D006536 ORTHO05D005877 4.2e-48 194.9 144 72.9
Nitab4.5_0000472g0270 Nicotiana tabacum HOM05D006536 ORTHO05D005877 1.8e-46 189.5 145 70.3
Nitab4.5_0001479g0060 Nicotiana tabacum HOM05D006536 ORTHO05D005877 7.4e-45 184.1 144 79.9
Peaxi162Scf00450g00873 Petunia axillaris HOM05D006536 ORTHO05D005877 1.3e-44 183.3 145 70.3
Peaxi162Scf00450g00816 Petunia axillaris HOM05D006536 ORTHO05D005877 3.7e-44 181.8 145 75.2
Nitab4.5_0008018g0020 Nicotiana tabacum HOM05D006536 ORTHO05D005877 2.4e-43 179.1 144 79.9
Peaxi162Scf00057g00136 Petunia axillaris HOM05D006536 ORTHO05D005877 2.6e-42 175.6 144 67.4
Nitab4.5_0003461g0020 Nicotiana tabacum HOM05D003749 ORTHO05D004421 3.8e-41 171.8 136 78.7
Nitab4.5_0001479g0050 Nicotiana tabacum HOM05D006536 ORTHO05D005877 1.9e-40 169.5 144 66.7
Nitab4.5_0006023g0020 Nicotiana tabacum HOM05D006536 ORTHO05D005877 3.2e-40 168.7 144 65.3
Peaxi162Scf00450g00854 Petunia axillaris HOM05D006536 ORTHO05D005877 4.2e-40 168.3 145 68.3
Nitab4.5_0001479g0070 Nicotiana tabacum HOM05D006536 ORTHO05D005877 8.8e-38 160.6 115 76.5
Solyc07g064210.2 Solanum lycopersicum HOM05D006536 ORTHO05D005877 3.3e-37 158.7 143 61.5
Sopen07g032350 Solanum pennellii HOM05D006536 ORTHO05D005877 9.7e-37 157.1 143 69.9
PGSC0003DMG400001033 Solanum tuberosum HOM05D006536 ORTHO05D005877 3.7e-36 155.2 143 58.7
Sopen07g032360 Solanum pennellii HOM05D006536 ORTHO05D005877 3.8e-33 145.2 143 55.9
Solyc07g064220.1 Solanum lycopersicum HOM05D006536 ORTHO05D005877 2.5e-32 142.5 110 66.4
Nitab4.5_0006918g0010 Nicotiana tabacum HOM05D006536 ORTHO05D005877 9.7e-29 130.6 77 84.4
Nitab4.5_0000397g0180 Nicotiana tabacum HOM05D006536 ORTHO05D005877 6.3e-28 127.9 115 66.1
Sopen07g032370 Solanum pennellii HOM05D006536 ORTHO05D005877 1.1e-24 117.1 112 59.8
CAN.G257.108 Capsicum annuum HOM05D006536 ORTHO05D005877 7.2e-24 114.4 90 67.8
Hma1.2p1_0745F.1_g212040 Hydrangea macrophylla HOM05D006536 ORTHO05D005877 3.3e-16 89.0 112 45.5
SGA_v2.0_scaffold13G06717 Striga asiatica HOM05D006536 ORTHO05D005877 1.6e-15 86.7 112 42.0
PGSC0003DMG400001052 Solanum tuberosum HOM05D006536 ORTHO05D005877 8.0e-15 84.3 79 59.5
PSO478G5239 Papaver somniferum HOM05D006536 ORTHO05D005877 1.4e-14 83.6 107 42.1
SGA_v2.0_scaffold13G06718 Striga asiatica HOM05D006536 ORTHO05D005877 1.8e-14 83.2 110 41.8
PSO675G9181 Papaver somniferum HOM05D006536 ORTHO05D005877 2.3e-14 82.8 107 43.9
PSO541G4685 Papaver somniferum HOM05D006536 ORTHO05D005877 3.0e-14 82.4 107 43.0
PSO541G5532 Papaver somniferum HOM05D006536 ORTHO05D005877 8.9e-14 80.9 107 41.1
ClCG09G018590 Citrullus lanatus HOM05D006536 ORTHO05D005877 4.4e-13 78.6 111 40.5
PSO541G3913 Papaver somniferum HOM05D006536 ORTHO05D005877 4.4e-13 78.6 107 40.2
ClCG10G005680 Citrullus lanatus HOM05D006536 ORTHO05D005877 7.5e-13 77.8 112 42.0
Cfa020407 Carpinus fangiana HOM05D006536 ORTHO05D005877 9.8e-13 77.4 142 38.0
Migut.J01041 Erythranthe guttata HOM05D006536 ORTHO05D005877 9.8e-13 77.4 114 39.5
Migut.J01035 Erythranthe guttata HOM05D006536 ORTHO05D005877 1.3e-12 77.0 114 41.2
Migut.J01038 Erythranthe guttata HOM05D006536 ORTHO05D005877 1.7e-12 76.6 116 39.7
MELO3C025418.2 Cucumis melo HOM05D006536 ORTHO05D005877 2.8e-12 75.9 109 40.4
Dinv26537 Davidia involucrata HOM05D006536 ORTHO05D005877 3.7e-12 75.5 106 41.5
Cfa020408 Carpinus fangiana HOM05D006536 ORTHO05D005877 6.3e-12 74.7 140 36.4
Migut.M01805 Erythranthe guttata HOM05D036104 ORTHO05D035166 1.1e-11 73.9 117 35.9
CANSAT54G1080 Cannabis sativa HOM05D006536 ORTHO05D005877 1.8e-11 73.2 97 41.2
HanXRQChr11g0332931 Helianthus annuus HOM05D009374 ORTHO05D012864 1.8e-11 73.2 119 36.1
Lsat_1_v5_gn_5_5901 Lactuca sativa HOM05D009374 ORTHO05D005877 3.1e-11 72.4 113 31.0
SalBow3G0084 Salvia bowleyana HOM05D003262 ORTHO05D003608 4.1e-11 72.0 154 33.1
DCAR_022529 Daucus carota HOM05D006536 ORTHO05D005877 5.4e-11 71.6 109 34.9
HanXRQChr11g0332911 Helianthus annuus HOM05D009374 ORTHO05D012864 7.0e-11 71.2 119 35.3
Eucgr.F03431 Eucalyptus grandis HOM05D006536 ORTHO05D005877 9.2e-11 70.9 107 37.4
Sed0024994 Sechium edule HOM05D006536 ORTHO05D005877 9.2e-11 70.9 108 37.0
Migut.J01036 Erythranthe guttata HOM05D006536 ORTHO05D005877 1.2e-10 70.5 150 46.0
AUR62015663 Chenopodium quinoa HOM05D009374 ORTHO05D005877 2.0e-10 69.7 105 38.1
AUR62020540 Chenopodium quinoa HOM05D009374 ORTHO05D005877 4.5e-10 68.6 104 35.6
PSO541G2788 Papaver somniferum HOM05D006536 ORTHO05D005877 4.5e-10 68.6 107 37.4
CANSAT11G1392 Cannabis sativa HOM05D006536 ORTHO05D005877 5.9e-10 68.2 104 35.6
THA.LOC104822213 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 5.9e-10 68.2 110 36.4
HanXRQChr15g0493431 Helianthus annuus HOM05D009374 ORTHO05D012864 7.8e-10 67.8 106 34.0
TWI39G0980 Tripterygium wilfordii HOM05D006536 ORTHO05D005877 1.0e-09 67.4 113 38.9
unitig_744.g24698 Utricularia gibba HOM05D009374 ORTHO05D005877 1.3e-09 67.0 112 38.4
THA.LOC104799882 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.7e-09 66.6 110 35.5
PSO017G6165 Papaver somniferum HOM05D006536 ORTHO05D005877 2.3e-09 66.2 92 39.1
Peaxi162Scf00714g00424 Petunia axillaris HOM05D006536 ORTHO05D005877 2.3e-09 66.2 110 40.0
unitig_8.g4307 Utricularia gibba HOM05D006536 ORTHO05D005877 2.9e-09 65.9 121 36.4
CANSAT54G2394 Cannabis sativa HOM05D006536 ORTHO05D005877 3.8e-09 65.5 93 38.7
vmacro11762 Vaccinium macrocarpon HOM05D006536 ORTHO05D005877 3.8e-09 65.5 81 42.0
ECA236G4404 Erigeron canadensis HOM05D009374 ORTHO05D012864 8.6e-09 64.3 106 34.0
QL08p013066 Quercus lobata HOM05D006536 ORTHO05D005877 8.6e-09 64.3 141 33.3
CiPaw.12G126700 Carya illinoinensis HOM05D006536 ORTHO05D005877 1.1e-08 63.9 106 41.5
THA.LOC104799881 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.1e-08 63.9 114 35.1
Oeu007646.1 Olea europaea HOM05D006536 ORTHO05D005877 1.5e-08 63.5 109 33.0
THA.LOC104817654 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.5e-08 63.5 110 34.5
Atru.chr2.3226 Acer truncatum HOM05D001264 ORTHO05D001167 1.9e-08 63.2 108 35.2
Cpa.g.sc10.244 Carica papaya HOM05D007475 ORTHO05D009529 1.9e-08 63.2 110 37.3
ClCG10G005660 Citrullus lanatus HOM05D006536 ORTHO05D005877 1.9e-08 63.2 115 33.0
Dinv40717 Davidia involucrata HOM05D006536 ORTHO05D005877 1.9e-08 63.2 112 37.5
Ciclev10009848m.g Citrus clementina HOM05D007475 ORTHO05D005877 2.5e-08 62.8 113 35.4
HanXRQChr11g0337791 Helianthus annuus HOM05D009374 ORTHO05D012864 3.3e-08 62.4 114 33.3
PGR083G0291 Punica granatum HOM05D006536 ORTHO05D005877 3.3e-08 62.4 106 38.7
EL10Ac4g07942 Beta vulgaris HOM05D009374 ORTHO05D005877 4.3e-08 62.0 108 32.4
CDE05G1907 Ceratophyllum demersum HOM05D006536 ORTHO05D005877 5.6e-08 61.6 108 35.2
CDE11G0553 Ceratophyllum demersum HOM05D006536 ORTHO05D005877 5.6e-08 61.6 107 36.4
Nitab4.5_0003924g0010 Nicotiana tabacum HOM05D006536 ORTHO05D005877 5.6e-08 61.6 110 35.5
Oeu022218.1 Olea europaea HOM05D006536 ORTHO05D005877 7.3e-08 61.2 110 31.8
QL08p013125 Quercus lobata HOM05D009374 ORTHO05D005877 7.3e-08 61.2 103 36.9
Lsat_1_v5_gn_3_115400 Lactuca sativa HOM05D006536 ORTHO05D005877 9.5e-08 60.8 101 33.7
Ah.06g183000 Amaranthus hybridus HOM05D001264 ORTHO05D001167 1.6e-07 60.1 102 31.4
MELO3C032238.2 Cucumis melo HOM05D006536 ORTHO05D005877 1.6e-07 60.1 96 36.5
Lsat_1_v5_gn_7_106501 Lactuca sativa HOM05D009374 ORTHO05D012864 1.6e-07 60.1 113 33.6
Peaxi162Scf00714g00425 Petunia axillaris HOM05D006536 ORTHO05D005877 1.6e-07 60.1 112 36.6
CDE11G0063 Ceratophyllum demersum HOM05D006536 ORTHO05D005877 2.1e-07 59.7 105 34.3
SalBow3G3753 Salvia bowleyana HOM05D006536 ORTHO05D005877 2.1e-07 59.7 68 47.1
SHI26644 Sapria himalayana HOM05D006536 ORTHO05D005877 3.6e-07 58.9 105 31.4
THA.LOC104809798 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 3.6e-07 58.9 110 33.6
THA.LOC104817656 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 3.6e-07 58.9 110 33.6
THA.LOC104822214 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 3.6e-07 58.9 110 33.6
THA.LOC104822215 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 3.6e-07 58.9 110 33.6
ECA236G0204 Erigeron canadensis HOM05D009374 ORTHO05D012864 6.1e-07 58.2 103 32.0
CsaV3_3G005360 Cucumis sativus L. HOM05D006536 ORTHO05D005877 8.0e-07 57.8 95 31.6
MBI18_g21250_MAGBIO Magnolia biondii HOM05D006536 ORTHO05D005877 8.0e-07 57.8 79 44.3
SHI31832 Sapria himalayana HOM05D006536 ORTHO05D005877 8.0e-07 57.8 110 34.5
THA.LOC104813415 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 8.0e-07 57.8 120 32.5
Lsat_1_v5_gn_7_108020 Lactuca sativa HOM05D006536 ORTHO05D005877 1.0e-06 57.4 105 33.3
SGA_v2.0_scaffold75G24748 Striga asiatica HOM05D006536 ORTHO05D005877 1.0e-06 57.4 102 30.4
vmacro11763 Vaccinium macrocarpon HOM05D006536 ORTHO05D005877 1.4e-06 57.0 106 34.0
Lsat_1_v5_gn_7_93341 Lactuca sativa HOM05D009374 ORTHO05D012864 1.8e-06 56.6 114 31.6
Lsat_1_v5_gn_7_93361 Lactuca sativa HOM05D009374 ORTHO05D012864 1.8e-06 56.6 114 31.6
Lsat_1_v5_gn_7_93381 Lactuca sativa HOM05D009374 ORTHO05D012864 1.8e-06 56.6 114 31.6
Lsat_1_v5_gn_7_93441 Lactuca sativa HOM05D009374 ORTHO05D012864 1.8e-06 56.6 114 31.6
Lsat_1_v5_gn_7_93500 Lactuca sativa HOM05D009374 ORTHO05D012864 1.8e-06 56.6 114 31.6
Lsat_1_v5_gn_7_93520 Lactuca sativa HOM05D009374 ORTHO05D012864 1.8e-06 56.6 114 31.6
Sabra11G0120700 Salix brachista HOM05D006536 ORTHO05D005877 1.8e-06 56.6 113 34.5
Migut.M01806 Erythranthe guttata HOM05D036104 ORTHO05D035166 2.3e-06 56.2 91 35.2
PGR083G1686 Punica granatum HOM05D006536 ORTHO05D005877 2.3e-06 56.2 114 39.5
ECA236G3076 Erigeron canadensis HOM05D009374 ORTHO05D012864 3.0e-06 55.8 72 40.3
HanXRQChr13g0408641 Helianthus annuus HOM05D009374 ORTHO05D005877 3.0e-06 55.8 103 26.2
PGR083G2006 Punica granatum HOM05D006536 ORTHO05D005877 3.0e-06 55.8 114 29.8
Sopen08g028800 Solanum pennellii HOM05D006536 ORTHO05D005877 3.0e-06 55.8 107 33.6
Ah.06g183010 Amaranthus hybridus HOM05D046556 ORTHO05D038212 4.0e-06 55.5 106 30.2
Eucgr.F00977 Eucalyptus grandis HOM05D006536 ORTHO05D005877 4.0e-06 55.5 110 32.7
Migut.H00699 Erythranthe guttata HOM05D006536 ORTHO05D005877 5.2e-06 55.1 110 29.1
Thhalv10015934m.g Eutrema salsugineum HOM05D007475 ORTHO05D009529 5.2e-06 55.1 116 35.3
Lsat_1_v5_gn_3_115460 Lactuca sativa HOM05D006536 ORTHO05D005877 5.2e-06 55.1 102 34.3
AL7G25650 Arabidopsis lyrata HOM05D007475 ORTHO05D009529 6.8e-06 54.7 114 35.1
Solyc08g080480.3 Solanum lycopersicum HOM05D006536 ORTHO05D005877 6.8e-06 54.7 109 33.9
AL7G25640 Arabidopsis lyrata HOM05D007475 ORTHO05D009529 8.9e-06 54.3 114 36.0
ECA248G3520 Erigeron canadensis HOM05D009374 ORTHO05D012864 8.9e-06 54.3 106 31.1
PGR083G0622 Punica granatum HOM05D006536 ORTHO05D005877 8.9e-06 54.3 130 35.4
SHI26637 Sapria himalayana HOM05D006536 ORTHO05D005877 8.9e-06 54.3 100 31.0
Thecc.07G051300 Theobroma cacao HOM05D006536 ORTHO05D005877 8.9e-06 54.3 103 32.0


User provided reference genes

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