Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004482g0060 Nicotiana tabacum HOM05D007051 ORTHO05D008842 2.5e-128 462.2 247 100.0
Nitab4.5_0010733g0020 Nicotiana tabacum HOM05D007051 ORTHO05D008842 5.1e-126 454.5 247 98.4
Solyc08g079240.4 Solanum lycopersicum HOM05D007051 ORTHO05D008842 8.5e-113 410.6 247 88.7
Sopen08g027680 Solanum pennellii HOM05D007051 ORTHO05D008842 1.9e-112 409.5 247 88.3
PGSC0003DMG400004734 Solanum tuberosum HOM05D007051 ORTHO05D008842 7.2e-112 407.5 247 88.3
CAN.G1337.17 Capsicum annuum HOM05D007051 ORTHO05D008842 2.0e-109 399.4 246 85.8
Peaxi162Scf00002g00416 Petunia axillaris HOM05D007051 ORTHO05D008842 3.1e-107 392.1 247 81.8
Cc08_g13070 Coffea canephora HOM05D007051 ORTHO05D008842 3.4e-85 318.9 232 72.4
CSS0029957 Camellia sinensis var. sinensis HOM05D007051 ORTHO05D008842 1.7e-84 316.6 247 67.6
CSS0034738 Camellia sinensis var. sinensis HOM05D007051 ORTHO05D008842 8.3e-84 314.3 247 67.2
QL12p014185 Quercus lobata HOM05D007051 ORTHO05D008842 9.1e-83 310.8 244 69.3
Dinv21586 Davidia involucrata HOM05D007051 ORTHO05D008842 1.2e-82 310.5 247 68.8
MD04G1081100 Malus domestica HOM05D007051 ORTHO05D008842 2.0e-82 309.7 215 74.9
Prupe.5G077000 Prunus persica HOM05D007051 ORTHO05D008842 3.5e-82 308.9 215 74.9
Actinidia27438 Actinidia chinensis HOM05D007051 ORTHO05D008842 4.5e-82 308.5 237 70.9
CiPaw.12G105800 Carya illinoinensis HOM05D007051 ORTHO05D008842 5.9e-82 308.1 245 68.6
SalBow6G1069 Salvia bowleyana HOM05D007051 ORTHO05D008842 6.6e-81 304.7 227 71.4
SGA_v2.0_scaffold120G32840 Striga asiatica HOM05D007051 ORTHO05D008842 1.9e-80 303.1 223 70.9
Duzib205G0440 Durio zibethinus HOM05D007051 ORTHO05D008842 4.2e-80 302.0 245 66.5
Medtr5g011990 Medicago truncatula HOM05D007051 ORTHO05D008842 5.5e-80 301.6 211 74.4
Ciclev10021945m.g Citrus clementina HOM05D007051 ORTHO05D008842 7.2e-80 301.2 241 66.4
Ca_06694_v3 Cicer arietinum L. HOM05D007051 ORTHO05D008842 9.5e-80 300.8 215 73.0
Hma1.2p1_1868F.1_g305950 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 1.6e-79 300.1 215 73.0
Lj2g0024450 Lotus japonicus HOM05D007051 ORTHO05D008842 2.1e-79 299.7 237 67.9
GSVIVG01006029001 Vitis vinifera HOM05D007051 ORTHO05D008842 4.7e-79 298.5 245 67.3
Atru.chr9.1399 Acer truncatum HOM05D007051 ORTHO05D008842 6.1e-79 298.1 215 72.1
Eucgr.D02017 Eucalyptus grandis HOM05D007051 ORTHO05D008842 6.1e-79 298.1 245 66.9
Sc01g0009270 Simmondsia chinensis HOM05D007051 ORTHO05D008842 6.1e-79 298.1 230 70.4
CANSAT21G0170 Cannabis sativa HOM05D007051 ORTHO05D008842 8.0e-79 297.7 248 67.7
Migut.A00866 Erythranthe guttata HOM05D007051 ORTHO05D008842 8.0e-79 297.7 227 69.2
Gohir.A11G020000 Gossypium hirsutum HOM05D007051 ORTHO05D008842 8.0e-79 297.7 245 65.7
Oeu024055.1 Olea europaea HOM05D007051 ORTHO05D008842 1.8e-78 296.6 230 68.3
Gohir.D11G019700 Gossypium hirsutum HOM05D007051 ORTHO05D008842 3.0e-78 295.8 243 65.4
Gorai.007G021000 Gossypium raimondii HOM05D007051 ORTHO05D008842 3.0e-78 295.8 245 65.7
TAR629G3399 Trochodendron aralioides HOM05D007051 ORTHO05D008842 5.2e-78 295.0 243 67.1
FAN08G0417 Fragaria x ananassa HOM05D007051 ORTHO05D008842 1.2e-77 293.9 207 74.4
FAN18G1307 Fragaria x ananassa HOM05D007051 ORTHO05D008842 1.2e-77 293.9 207 74.4
Lsat_1_v5_gn_3_2541 Lactuca sativa HOM05D007051 ORTHO05D008842 2.0e-77 293.1 250 62.0
FAN13G2377 Fragaria x ananassa HOM05D007051 ORTHO05D008842 2.6e-77 292.7 216 71.8
FAN04G1713 Fragaria x ananassa HOM05D007051 ORTHO05D008842 3.4e-77 292.4 207 73.9
THA.LOC104809449 Tarenaya hassleriana HOM05D007051 ORTHO05D008842 4.4e-77 292.0 207 72.5
MELO3C005568.2 Cucumis melo HOM05D007051 ORTHO05D008842 5.7e-77 291.6 242 65.3
arahy.Tifrunner.gnm1.ann1.BK8PZK Arachis hypogaea HOM05D007051 ORTHO05D008842 7.5e-77 291.2 215 69.8
ClCG01G003730 Citrullus lanatus HOM05D007051 ORTHO05D008842 7.5e-77 291.2 243 64.2
unitig_699.g19761 Utricularia gibba HOM05D001703 ORTHO05D007194 9.8e-77 290.8 238 66.0
ATR0665G189 Amborella trichopoda HOM05D007051 ORTHO05D008842 1.7e-76 290.0 215 69.8
DCAR_006807 Daucus carota HOM05D007051 ORTHO05D008842 2.2e-76 289.7 240 62.1
Manes.01G074700 Manihot esculenta HOM05D007051 ORTHO05D008842 2.2e-76 289.7 248 64.9
PGR031G0283 Punica granatum HOM05D007051 ORTHO05D008842 2.2e-76 289.7 215 71.2
arahy.Tifrunner.gnm1.ann1.2BY1CI Arachis hypogaea HOM05D007051 ORTHO05D008842 2.9e-76 289.3 215 69.3
MSTRG.12072 Avicennia marina HOM05D007051 ORTHO05D008842 4.9e-76 288.5 247 64.0
Sabra01G0092000 Salix brachista HOM05D007051 ORTHO05D008842 8.3e-76 287.7 239 65.3
Potri.001G119100 Populus trichocarpa HOM05D007051 ORTHO05D008842 1.8e-75 286.6 231 67.1
vmacro14055 Vaccinium macrocarpon HOM05D007051 ORTHO05D008842 1.8e-75 286.6 206 71.4
C09p19230 Brassica napus HOM05D007051 ORTHO05D008842 2.4e-75 286.2 238 64.7
BolC9t54830H Brassica oleracea HOM05D007051 ORTHO05D008842 3.2e-75 285.8 238 64.7
Glyma.11G030400 Glycine max HOM05D007051 ORTHO05D008842 3.2e-75 285.8 246 63.8
BcaC04g22447 Brassica carinata HOM05D007051 ORTHO05D008842 5.4e-75 285.0 238 64.3
CsaV3_5G003870 Cucumis sativus L. HOM05D007051 ORTHO05D008842 7.0e-75 284.6 242 64.0
FvH4_5g00440 Fragaria vesca HOM05D007051 ORTHO05D008842 7.0e-75 284.6 204 74.0
A09p15970 Brassica napus HOM05D007051 ORTHO05D008842 1.2e-74 283.9 238 64.7
BraA09t37232Z Brassica rapa HOM05D007051 ORTHO05D008842 1.2e-74 283.9 238 64.7
BcaB07g31359 Brassica carinata HOM05D007051 ORTHO05D008842 3.5e-74 282.3 238 63.9
AUR62007459 Chenopodium quinoa HOM05D007051 ORTHO05D008842 4.6e-74 282.0 208 72.1
AL2G13010 Arabidopsis lyrata HOM05D007051 ORTHO05D008842 5.9e-74 281.6 208 68.3
Hund11573 Selenicereus undatus HOM05D007051 ORTHO05D008842 2.3e-73 279.6 248 63.7
CARHR049060 Cardamine hirsuta HOM05D007051 ORTHO05D008842 2.9e-73 279.3 208 68.8
Sp2g01860 Schrenkiella parvula HOM05D007051 ORTHO05D008842 2.9e-73 279.3 238 62.6
AUR62039918 Chenopodium quinoa HOM05D007051 ORTHO05D008842 5.0e-73 278.5 208 71.6
TWI60G1677 Tripterygium wilfordii HOM05D007051 ORTHO05D008842 6.6e-73 278.1 241 63.1
Haze_08593 Corylus avellana HOM05D007051 ORTHO05D008842 2.5e-72 276.2 222 68.9
Thhalv10023664m.g Eutrema salsugineum HOM05D007051 ORTHO05D008842 2.5e-72 276.2 208 67.8
Nn6g34078 Nelumbo nucifera HOM05D007051 ORTHO05D008842 3.3e-72 275.8 206 68.9
AT1G62780 Arabidopsis thaliana HOM05D007051 ORTHO05D008842 5.6e-72 275.0 208 66.3
CDE02G0603 Ceratophyllum demersum HOM05D007051 ORTHO05D008842 5.6e-72 275.0 245 62.4
Aa31LG2G320 Aethionema arabicum HOM05D007051 ORTHO05D008842 7.3e-72 274.6 246 58.9
PSO675G3044 Papaver somniferum HOM05D007051 ORTHO05D008842 2.8e-71 272.7 250 58.0
Psat2g179120 Pisum sativum HOM05D007051 ORTHO05D008842 3.6e-71 272.3 228 62.3
PSO717G0094 Papaver somniferum HOM05D007051 ORTHO05D008842 1.0e-70 270.8 250 57.6
VMungo1215G1548 Vigna mungo HOM05D007051 ORTHO05D008842 6.8e-70 268.1 207 66.2
Phvul.002G060700 Phaseolus vulgaris HOM05D007051 ORTHO05D008842 1.5e-69 266.9 207 66.7
Os04g0105700 Oryza sativa ssp. japonica HOM05D007051 ORTHO05D008842 3.4e-69 265.8 215 66.5
RcHm_v2.0_Chr7g0202061 Rosa chinensis HOM05D007051 ORTHO05D008842 3.4e-69 265.8 207 67.6
Lalb_Chr09g0324461 Lupinus albus HOM05D007051 ORTHO05D008842 5.8e-69 265.0 252 59.1
Carub.0002s0220 Capsella rubella HOM05D007051 ORTHO05D008842 1.9e-67 260.0 252 57.9
Zm00001eb300480 Zea mays HOM05D007051 ORTHO05D008842 4.1e-67 258.8 215 63.7
MBI04_g32270_MAGBIO Magnolia biondii HOM05D007051 ORTHO05D008842 3.9e-65 252.3 233 60.1
HanXRQChr17g0549011 Helianthus annuus HOM05D007051 ORTHO05D008842 1.5e-64 250.4 250 58.0
Sed0010491 Sechium edule HOM05D007051 ORTHO05D008842 4.3e-64 248.8 238 58.0
MBI04_g42034_MAGBIO Magnolia biondii HOM05D007051 ORTHO05D008842 2.3e-62 243.0 237 58.2
Aqoxy7G00687 Aquilegia oxysepala HOM05D007051 ORTHO05D008842 8.9e-62 241.1 206 61.2
AagrBONN_evm.TU.Sc2ySwM_362.1892 Anthoceros agrestis HOM05D007051 ORTHO05D008842 2.4e-59 233.0 206 58.7
ECA246G0398 Erigeron canadensis HOM05D007051 ORTHO05D008842 7.1e-59 231.5 232 55.2
SEGI_34604 Sequoiadendron giganteum HOM05D007051 ORTHO05D008842 4.6e-58 228.8 215 57.7
HPP92_015062 Vanilla planifolia HOM05D007051 ORTHO05D008842 4.6e-58 228.8 210 58.6
TPR.G820 Trifolium pratense HOM05D007051 ORTHO05D008842 1.7e-57 226.9 169 68.6
Thecc.03G259200 Theobroma cacao HOM05D007051 ORTHO05D008842 1.5e-56 223.8 191 61.3
Pp3c10_11840 Physcomitrium patens HOM05D007051 ORTHO05D008842 7.3e-56 221.5 207 54.6
Hma1.2p1_1868F.1_g305940 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 2.4e-51 206.5 145 73.1
SMO367G0716 Selaginella moellendorffii HOM05D007051 ORTHO05D008842 3.3e-48 196.1 231 48.9
Glyma.01G211400 Glycine max HOM05D007051 ORTHO05D008842 1.5e-40 170.6 157 63.1
Duzib084G0812 Durio zibethinus HOM05D007051 ORTHO05D008842 3.4e-37 159.5 154 56.5
Mapoly0062s0102 Marchantia polymorpha HOM05D007051 ORTHO05D008842 4.9e-36 155.6 211 45.5
Hma1.2p1_2244F.1_g317930 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 3.3e-32 142.9 99 75.8
Cpa.g.sc29.111 Carica papaya HOM05D007051 ORTHO05D008842 4.0e-30 136.0 121 64.5
Cre13.g579550 Chlamydomonas reinhardtii HOM05D007051 ORTHO05D008842 8.4e-28 128.3 207 42.0
EL10Ac5g12994 Beta vulgaris HOM05D007051 ORTHO05D008842 1.0e-25 121.3 104 63.5
vmacro16051 Vaccinium macrocarpon HOM05D007051 ORTHO05D008842 9.6e-24 114.8 79 73.4
PRCOL_00000809 Prasinoderma coloniale HOM05D007051 ORTHO05D008842 1.0e-17 94.7 203 32.5
MCO02G329 Micromonas commoda HOM05D007051 ORTHO05D008842 1.1e-11 74.7 156 31.4
arahy.Tifrunner.gnm1.ann1.VE7KXP Arachis hypogaea HOM05D007051 ORTHO05D008842 1.4e-11 74.3 65 63.1
Oeu056087.1 Olea europaea HOM05D007051 ORTHO05D008842 2.1e-10 70.5 52 71.2
Glyma.05G077300 Glycine max HOM05D007051 ORTHO05D008842 1.8e-06 57.4 46 63.0


User provided reference genes

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