Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004471g0010 Nicotiana tabacum HOM05D003448 ORTHO05D004028 0.0e+00 1400.6 767 100.0
Nitab4.5_0000391g0110 Nicotiana tabacum HOM05D003448 ORTHO05D004028 4.9e-268 927.9 648 82.9
Nitab4.5_0000391g0120 Nicotiana tabacum HOM05D003448 ORTHO05D004028 5.0e-212 741.9 580 73.8
Nitab4.5_0004471g0060 Nicotiana tabacum HOM05D003448 ORTHO05D004028 2.1e-210 736.5 556 74.5
Nitab4.5_0000391g0160 Nicotiana tabacum HOM05D003448 ORTHO05D004028 9.5e-195 684.5 455 81.3
Peaxi162Scf00222g00119 Petunia axillaris HOM05D003448 ORTHO05D004028 1.9e-134 484.2 544 54.8
Peaxi162Scf00222g00125 Petunia axillaris HOM05D003448 ORTHO05D004028 1.3e-124 451.4 554 52.5
PGSC0003DMG400046292 Solanum tuberosum HOM05D003448 ORTHO05D004028 2.6e-83 314.3 310 59.7
Sopen05g007670 Solanum pennellii HOM05D003448 ORTHO05D004028 3.4e-83 313.9 313 59.7
Sopen05g007660 Solanum pennellii HOM05D003448 ORTHO05D004028 2.7e-80 304.3 313 57.8
Nitab4.5_0014231g0010 Nicotiana tabacum HOM05D003448 ORTHO05D004028 2.7e-72 277.7 188 78.2
Sopen05g007690 Solanum pennellii HOM05D003448 ORTHO05D004028 3.8e-71 273.9 296 58.4
PGSC0003DMG400028404 Solanum tuberosum HOM05D003448 ORTHO05D004028 1.8e-65 255.0 296 56.4
Solyc05g012850.3 Solanum lycopersicum HOM05D003448 ORTHO05D004028 2.3e-60 238.0 225 60.4
Sopen05g007650 Solanum pennellii HOM05D003448 ORTHO05D004028 2.9e-58 231.1 222 56.8
Solyc05g012860.2 Solanum lycopersicum HOM05D003448 ORTHO05D004028 1.1e-57 229.2 236 60.2
FvH4_4g30670 Fragaria vesca HOM05D003448 ORTHO05D004028 5.6e-54 216.9 623 31.8
Nitab4.5_0000391g0100 Nicotiana tabacum HOM05D003448 ORTHO05D004028 2.8e-53 214.5 409 39.1
Sopen04g001550 Solanum pennellii HOM05D003448 ORTHO05D004028 5.2e-52 210.3 328 43.6
Nitab4.5_0007467g0030 Nicotiana tabacum HOM05D003448 ORTHO05D004028 8.3e-50 203.0 334 44.3
PGSC0003DMG400002851 Solanum tuberosum HOM05D003448 ORTHO05D004028 1.4e-49 202.2 327 42.2
Cc11_g12520 Coffea canephora HOM05D003448 ORTHO05D004028 1.3e-39 169.1 316 39.9
Nitab4.5_0000391g0130 Nicotiana tabacum HOM05D003448 ORTHO05D004028 2.5e-38 164.9 145 68.3
Solyc05g012810.3 Solanum lycopersicum HOM05D003448 ORTHO05D004028 7.3e-38 163.3 173 54.9
Dinv34100 Davidia involucrata HOM05D003448 ORTHO05D004028 1.2e-37 162.5 289 38.8
CiPaw.05G129300 Carya illinoinensis HOM05D003448 ORTHO05D004028 3.6e-37 161.0 308 39.0
CSS0040782 Camellia sinensis var. sinensis HOM05D003448 ORTHO05D004028 1.1e-36 159.5 306 36.9
HanXRQChr12g0379221 Helianthus annuus HOM05D003448 ORTHO05D004028 2.0e-35 155.2 318 36.5
Atru.chr11.1710 Acer truncatum HOM05D003448 ORTHO05D004028 5.8e-35 153.7 318 34.3
RcHm_v2.0_Chr4g0439081 Rosa chinensis HOM05D003448 ORTHO05D004028 9.9e-35 152.9 312 35.6
Hma1.2p1_0357F.1_g134310 Hydrangea macrophylla HOM05D003448 ORTHO05D004028 3.8e-34 151.0 308 37.7
MSTRG.2328 Avicennia marina HOM05D003448 ORTHO05D004028 4.9e-34 150.6 330 37.0
CANSAT64G1203 Cannabis sativa HOM05D003448 ORTHO05D004028 1.1e-33 149.4 309 36.2
Prupe.1G280200 Prunus persica HOM05D003448 ORTHO05D004028 1.9e-33 148.7 304 35.9
Solyc05g012820.2 Solanum lycopersicum HOM05D003448 ORTHO05D004028 2.4e-33 148.3 150 56.7
Cfa008923 Carpinus fangiana HOM05D003448 ORTHO05D004028 4.2e-33 147.5 315 38.4
SGA_v2.0_scaffold287G47147 Striga asiatica HOM05D003448 ORTHO05D004028 7.1e-33 146.7 296 36.1
Atru.chr11.1709 Acer truncatum HOM05D003448 ORTHO05D004028 9.3e-33 146.4 316 34.8
Eucgr.G02471 Eucalyptus grandis HOM05D003448 ORTHO05D004028 2.7e-32 144.8 317 36.6
SalBow8G5474 Salvia bowleyana HOM05D003448 ORTHO05D004028 3.5e-32 144.4 304 38.2
Migut.E00067 Erythranthe guttata HOM05D003448 ORTHO05D004028 4.6e-32 144.1 301 37.2
Cpa.g.sc1.73 Carica papaya HOM05D003448 ORTHO05D004028 6.0e-32 143.7 305 36.1
Lsat_1_v5_gn_3_51801 Lactuca sativa HOM05D003448 ORTHO05D004028 6.0e-32 143.7 287 36.6
Ciclev10033637m.g Citrus clementina HOM05D003448 ORTHO05D004028 1.7e-31 142.1 319 37.3
Lsat_1_v5_gn_4_10361 Lactuca sativa HOM05D003448 ORTHO05D004028 1.7e-31 142.1 299 37.5
Gohir.D02G127600 Gossypium hirsutum HOM05D003448 ORTHO05D004028 3.0e-31 141.4 312 35.3
QL03p069872 Quercus lobata HOM05D003448 ORTHO05D004028 5.1e-31 140.6 322 36.3
Oeu057654.1 Olea europaea HOM05D003448 ORTHO05D004028 1.1e-30 139.4 266 37.6
Manes.01G031900 Manihot esculenta HOM05D003448 ORTHO05D004028 1.5e-30 139.0 307 33.2
Thecc.02G338900 Theobroma cacao HOM05D003448 ORTHO05D004028 1.5e-30 139.0 306 38.6
Gorai.005G143200 Gossypium raimondii HOM05D003448 ORTHO05D004028 1.9e-30 138.7 311 35.7
Duzib248G1355 Durio zibethinus HOM05D003448 ORTHO05D004028 4.3e-30 137.5 312 34.6
PGR016G0005 Punica granatum HOM05D003448 ORTHO05D004028 7.3e-30 136.7 302 36.1
PGR119G2543 Punica granatum HOM05D003448 ORTHO05D004028 7.3e-30 136.7 302 36.1
Cc11_g07300 Coffea canephora HOM05D003448 ORTHO05D004028 6.2e-29 133.7 304 34.2
SGA_v2.0_scaffold36G14418 Striga asiatica HOM05D003448 ORTHO05D004028 1.8e-28 132.1 297 37.0
Manes.05G106600 Manihot esculenta HOM05D003448 ORTHO05D004028 4.0e-28 131.0 295 34.2
unitig_8.g3960 Utricularia gibba HOM05D003448 ORTHO05D004028 4.0e-28 131.0 313 32.9
TAR371G1243 Trochodendron aralioides HOM05D003448 ORTHO05D004028 5.3e-28 130.6 309 34.6
Eucgr.G02473 Eucalyptus grandis HOM05D003448 ORTHO05D004028 9.0e-28 129.8 264 36.0
RcHm_v2.0_Chr4g0439091 Rosa chinensis HOM05D003448 ORTHO05D004028 9.0e-28 129.8 297 35.4
Oeu021088.1 Olea europaea HOM05D003448 ORTHO05D004028 1.2e-27 129.4 284 35.6
Hma1.2p1_0354F.1_g133775 Hydrangea macrophylla HOM05D003448 ORTHO05D004028 2.6e-27 128.3 279 36.9
Lj6P783T35 Lonicera japonica HOM05D003448 ORTHO05D004028 2.6e-27 128.3 207 40.1
Gohir.D13G078600 Gossypium hirsutum HOM05D003448 ORTHO05D004028 3.4e-27 127.9 291 35.1
Lsat_1_v5_gn_8_49320 Lactuca sativa HOM05D003448 ORTHO05D004028 3.4e-27 127.9 299 35.5
Gohir.A13G078400 Gossypium hirsutum HOM05D003448 ORTHO05D004028 4.5e-27 127.5 291 34.7
Gorai.013G089900 Gossypium raimondii HOM05D003448 ORTHO05D004028 4.5e-27 127.5 291 34.7
EL10Ac6g13273 Beta vulgaris HOM05D003448 ORTHO05D004028 7.6e-27 126.7 324 34.0
Actinidia12305 Actinidia chinensis HOM05D003448 ORTHO05D004028 2.2e-26 125.2 232 39.2
Hund25204 Selenicereus undatus HOM05D003448 ORTHO05D004028 3.8e-26 124.4 319 31.7
Potri.008G091600 Populus trichocarpa HOM05D003448 ORTHO05D004028 6.4e-26 123.6 309 34.3
Duzib251G0906 Durio zibethinus HOM05D003448 ORTHO05D004028 1.1e-25 122.9 316 34.2
AUR62032847 Chenopodium quinoa HOM05D003448 ORTHO05D004028 1.9e-25 122.1 321 32.1
Migut.L01240 Erythranthe guttata HOM05D003448 ORTHO05D004028 1.9e-25 122.1 314 31.5
THA.LOC104801852 Tarenaya hassleriana HOM05D003448 ORTHO05D004028 1.9e-25 122.1 308 33.4
VMungo0251G3339 Vigna mungo HOM05D003448 ORTHO05D004028 1.9e-25 122.1 325 33.8
COL.COLO4_27963 Corchorus olitorius HOM05D003448 ORTHO05D004028 9.3e-25 119.8 316 33.5
A02p33350 Brassica napus HOM05D003448 ORTHO05D004028 1.2e-24 119.4 319 32.0
CSS0006655 Camellia sinensis var. sinensis HOM05D003448 ORTHO05D004028 1.2e-24 119.4 305 32.8
COL.COLO4_27962 Corchorus olitorius HOM05D003448 ORTHO05D004028 1.2e-24 119.4 325 32.6
CANSAT64G0892 Cannabis sativa HOM05D003448 ORTHO05D004028 1.8e-23 115.5 317 29.7
Aa31LG2G7210 Aethionema arabicum HOM05D003448 ORTHO05D004028 2.3e-23 115.2 304 31.2
Sabra08G0068600 Salix brachista HOM05D003448 ORTHO05D004028 2.3e-23 115.2 296 34.8
Lsat_1_v5_gn_8_49260 Lactuca sativa HOM05D003448 ORTHO05D004028 3.0e-23 114.8 288 34.0
Medtr4g082550 Medicago truncatula HOM05D003448 ORTHO05D004028 3.0e-23 114.8 324 32.1
Psat7g154240 Pisum sativum HOM05D003448 ORTHO05D004028 3.9e-23 114.4 306 34.3
VMungo0251G1914 Vigna mungo HOM05D003448 ORTHO05D004028 6.7e-23 113.6 305 33.8
Gorai.013G089600 Gossypium raimondii HOM05D003448 ORTHO05D004028 8.7e-23 113.2 250 33.6
Lsat_1_v5_gn_8_49240 Lactuca sativa HOM05D003448 ORTHO05D004028 8.7e-23 113.2 267 32.6
BcaB07g30304 Brassica carinata HOM05D003448 ORTHO05D004028 1.1e-22 112.8 309 30.7
Gorai.013G089800 Gossypium raimondii HOM05D003448 ORTHO05D004028 1.1e-22 112.8 250 33.2
Potri.010G163300 Populus trichocarpa HOM05D003448 ORTHO05D004028 1.5e-22 112.5 315 31.4
Ca_25944_v3 Cicer arietinum L. HOM05D003448 ORTHO05D004028 1.9e-22 112.1 319 32.0
Gohir.D13G078400 Gossypium hirsutum HOM05D003448 ORTHO05D004028 4.3e-22 110.9 250 34.0
AL5G13040 Arabidopsis lyrata HOM05D003448 ORTHO05D004028 5.6e-22 110.5 314 29.9
AT3G11810 Arabidopsis thaliana HOM05D003448 ORTHO05D004028 5.6e-22 110.5 310 30.6
HanXRQChr12g0361771 Helianthus annuus HOM05D003448 ORTHO05D004028 7.4e-22 110.2 297 31.0
Migut.L01238 Erythranthe guttata HOM05D003448 ORTHO05D004028 1.3e-21 109.4 318 29.9
Glyma.20G030300 Glycine max HOM05D003448 ORTHO05D004028 1.6e-21 109.0 317 31.9
Lsat_1_v5_gn_8_49200 Lactuca sativa HOM05D003448 ORTHO05D004028 2.8e-21 108.2 305 30.8
Lj4g0008688 Lotus japonicus HOM05D003448 ORTHO05D004028 2.8e-21 108.2 307 35.2
Nitab4.5_0004471g0140 Nicotiana tabacum HOM05D003448 ORTHO05D004028 2.8e-21 108.2 89 64.0
Sp2g14260 Schrenkiella parvula HOM05D003448 ORTHO05D004028 3.7e-21 107.8 320 31.6
DCAR_023813 Daucus carota HOM05D003448 ORTHO05D004028 4.8e-21 107.5 304 32.9
HanXRQChr12g0362021 Helianthus annuus HOM05D003448 ORTHO05D004028 4.8e-21 107.5 201 35.8
Phvul.002G103700 Phaseolus vulgaris HOM05D003448 ORTHO05D004028 4.8e-21 107.5 295 33.9
Gohir.A13G078300 Gossypium hirsutum HOM05D003448 ORTHO05D004028 1.1e-20 106.3 250 32.4
Ah.03g134640 Amaranthus hybridus HOM05D003448 ORTHO05D004028 1.4e-20 105.9 318 30.8
Glyma.20G030700 Glycine max HOM05D003448 ORTHO05D004028 1.4e-20 105.9 302 34.4
Nitab4.5_0000014g0220 Nicotiana tabacum HOM05D003448 ORTHO05D004028 1.8e-20 105.5 225 40.0
Glyma.20G030600 Glycine max HOM05D003448 ORTHO05D004028 4.0e-20 104.4 307 32.2
Phvul.002G168700 Phaseolus vulgaris HOM05D003448 ORTHO05D004028 4.0e-20 104.4 290 32.1
Carub.0005s0231 Capsella rubella HOM05D003448 ORTHO05D004028 5.3e-20 104.0 306 29.7
Aqoxy3G03502 Aquilegia oxysepala HOM05D003448 ORTHO05D004028 9.0e-20 103.2 210 36.2
arahy.Tifrunner.gnm1.ann1.57BZA4 Arachis hypogaea HOM05D003448 ORTHO05D004028 1.2e-19 102.8 318 32.4
THA.LOC104824071 Tarenaya hassleriana HOM05D003448 ORTHO05D004028 1.2e-19 102.8 315 31.7
Thhalv10005445m.g Eutrema salsugineum HOM05D003448 ORTHO05D004028 1.5e-19 102.4 323 30.7
BcaB07g30674 Brassica carinata HOM05D003448 ORTHO05D004028 3.4e-19 101.3 315 29.5
Solyc04g005530.3 Solanum lycopersicum HOM05D003448 ORTHO05D004028 5.8e-19 100.5 181 40.3
Lsat_1_v5_gn_8_49220 Lactuca sativa HOM05D003448 ORTHO05D004028 7.6e-19 100.1 289 29.4
Lalb_Chr05g0220171 Lupinus albus HOM05D003448 ORTHO05D004028 1.7e-18 99.0 300 32.3
CARHR145690 Cardamine hirsuta HOM05D003448 ORTHO05D004028 6.4e-18 97.1 309 29.1
BcaC04g21492 Brassica carinata HOM05D003448 ORTHO05D004028 8.4e-18 96.7 310 28.4
C09p31190 Brassica napus HOM05D003448 ORTHO05D004028 8.4e-18 96.7 310 28.4
BolC9t55975H Brassica oleracea HOM05D003448 ORTHO05D004028 8.4e-18 96.7 310 28.4
SalBow2G2818 Salvia bowleyana HOM05D003448 ORTHO05D004028 1.4e-17 95.9 311 29.9
SalBow2G2515 Salvia bowleyana HOM05D003448 ORTHO05D004028 1.9e-17 95.5 310 30.0
Oeu016239.1 Olea europaea HOM05D006937 ORTHO05D008747 5.5e-17 94.0 171 36.8
Peaxi162Scf00187g00126 Petunia axillaris HOM05D003448 ORTHO05D004028 7.1e-17 93.6 194 38.1
Psat7g153440 Pisum sativum HOM05D003448 ORTHO05D004028 9.3e-17 93.2 301 32.2
BcaC03g17206 Brassica carinata HOM05D003448 ORTHO05D004028 1.6e-16 92.4 312 29.5
A09p24360 Brassica napus HOM05D003448 ORTHO05D004028 1.6e-16 92.4 309 29.4
BraA09t38029Z Brassica rapa HOM05D003448 ORTHO05D004028 1.6e-16 92.4 309 29.4
Medtr4g082355 Medicago truncatula HOM05D003448 ORTHO05D004028 1.6e-16 92.4 305 31.8
TAR371G0373 Trochodendron aralioides HOM05D003448 ORTHO05D004028 4.6e-16 90.9 201 35.8
Medtr4g082360 Medicago truncatula HOM05D003448 ORTHO05D004028 1.3e-15 89.4 289 30.8
SalBow2G2694 Salvia bowleyana HOM05D003448 ORTHO05D004028 2.3e-15 88.6 298 29.2
Glyma.07G227750 Glycine max HOM05D003448 ORTHO05D004028 1.5e-14 85.9 321 29.6
BcaC03g17209 Brassica carinata HOM05D003448 ORTHO05D004028 4.3e-14 84.3 220 32.3
SEGI_06194 Sequoiadendron giganteum HOM05D003448 ORTHO05D004028 4.3e-14 84.3 308 29.5
Haze_11952 Corylus avellana HOM05D003448 ORTHO05D004028 1.3e-13 82.8 146 39.0
SEGI_11541 Sequoiadendron giganteum HOM05D000043 ORTHO05D001371 1.1e-12 79.7 159 35.2
ATR0730G136 Amborella trichopoda HOM05D003448 ORTHO05D004028 1.4e-12 79.3 303 28.4
CSS0034838 Camellia sinensis var. sinensis HOM05D003448 ORTHO05D004028 2.4e-12 78.6 302 28.1
AUR62005855 Chenopodium quinoa HOM05D003448 ORTHO05D004028 9.0e-12 76.6 200 36.0
MD16G1066700 Malus domestica HOM05D003448 ORTHO05D004028 9.0e-12 76.6 172 35.5
TPR.G36791 Trifolium pratense HOM05D003448 ORTHO05D004028 9.0e-12 76.6 180 38.3
HanXRQChr12g0361861 Helianthus annuus HOM05D003448 ORTHO05D004028 3.4e-11 74.7 139 36.7
Migut.L01239 Erythranthe guttata HOM05D003448 ORTHO05D004028 1.7e-10 72.4 288 27.4
CANSAT64G2624 Cannabis sativa HOM05D003448 ORTHO05D004028 6.5e-10 70.5 289 27.7
MD12G1099700 Malus domestica HOM05D003448 ORTHO05D004028 2.5e-09 68.6 127 33.9
Nitab4.5_0008978g0020 Nicotiana tabacum HOM05D003448 ORTHO05D025922 3.2e-09 68.2 55 60.0
Medtr4g082365 Medicago truncatula HOM05D003448 ORTHO05D004028 4.2e-09 67.8 268 29.1
AT2G03330 Arabidopsis thaliana HOM05D003448 ORTHO05D004028 7.1e-09 67.0 147 32.0
ECA246G1613 Erigeron canadensis HOM05D003448 ORTHO05D004028 7.1e-09 67.0 118 38.1
Psat7g135520 Pisum sativum HOM05D003448 ORTHO05D004028 7.1e-09 67.0 252 34.9
PGSC0003DMG400028337 Solanum tuberosum HOM05D003448 ORTHO05D004028 2.1e-08 65.5 71 50.7
TPR.G38090 Trifolium pratense HOM05D003448 ORTHO05D004028 2.7e-08 65.1 172 41.3
Lalb_Chr09g0329141 Lupinus albus HOM05D003448 ORTHO05D004028 4.6e-08 64.3 164 40.2
CAN.G964.17 Capsicum annuum HOM05D000002 ORTHO05D000001 1.0e-07 63.2 70 57.1
HanXRQChr12g0361791 Helianthus annuus HOM05D003448 ORTHO05D004028 2.3e-07 62.0 144 33.3
TPR.G11298 Trifolium pratense HOM05D003448 ORTHO05D004028 2.3e-07 62.0 302 26.8
Sopen05g007630 Solanum pennellii HOM05D025680 ORTHO05D025922 6.7e-07 60.5 76 51.3
Migut.L01237 Erythranthe guttata HOM05D003448 ORTHO05D004028 1.1e-06 59.7 258 28.7
C02p51340 Brassica napus HOM05D003448 ORTHO05D004028 1.9e-06 58.9 111 35.1
C02p51370 Brassica napus HOM05D003448 ORTHO05D004028 1.9e-06 58.9 111 35.1
Lalb_Chr05g0220181 Lupinus albus HOM05D003448 ORTHO05D004028 1.9e-06 58.9 125 33.6
TPR.G34075 Trifolium pratense HOM05D003448 ORTHO05D004028 3.3e-06 58.2 142 33.8
unitig_699.g19913 Utricularia gibba HOM05D003448 ORTHO05D004028 5.7e-06 57.4 135 31.9


User provided reference genes

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