Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004458g0010 Nicotiana tabacum HOM05D005841 ORTHO05D007132 7.0e-197 690.6 410 100.0
Nitab4.5_0000324g0020 Nicotiana tabacum HOM05D005841 ORTHO05D007132 1.4e-189 666.4 410 97.3
Peaxi162Scf00258g00731 Petunia axillaris HOM05D005841 ORTHO05D007132 1.6e-177 626.3 410 88.8
Dinv24065 Davidia involucrata HOM05D005841 ORTHO05D007132 2.5e-149 532.7 411 68.9
PGSC0003DMG400023670 Solanum tuberosum HOM05D005841 ORTHO05D007132 1.6e-148 530.0 421 77.7
CSS0015441 Camellia sinensis var. sinensis HOM05D005841 ORTHO05D007132 2.7e-148 529.3 410 68.0
Rhsim03G0005600 Rhododendron simsii HOM05D005841 ORTHO05D007132 3.9e-147 525.4 410 67.6
Sopen10g031070 Solanum pennellii HOM05D005841 ORTHO05D007132 3.9e-147 525.4 446 75.1
Dinv14310 Davidia involucrata HOM05D005841 ORTHO05D007132 4.3e-146 521.9 410 67.8
MSTRG.19910 Avicennia marina HOM05D005841 ORTHO05D007132 1.8e-144 516.5 402 66.7
Solyc10g080520.3 Solanum lycopersicum HOM05D005841 ORTHO05D007132 1.2e-143 513.8 375 84.3
vmacro07900 Vaccinium macrocarpon HOM05D005841 ORTHO05D007132 2.9e-142 509.2 406 65.3
Atru.chr12.1096 Acer truncatum HOM05D005841 ORTHO05D007132 5.0e-142 508.4 412 64.8
Oeu007758.1 Olea europaea HOM05D005841 ORTHO05D007132 6.5e-142 508.1 404 64.6
QL04p022932 Quercus lobata HOM05D005841 ORTHO05D007132 1.8e-139 500.0 407 73.5
Lju124A25T34 Lonicera japonica HOM05D005841 ORTHO05D007132 9.7e-138 494.2 407 66.3
Potri.003G189400 Populus trichocarpa HOM05D005841 ORTHO05D007132 3.7e-137 492.3 409 65.5
Actinidia22040 Actinidia chinensis HOM05D005841 ORTHO05D007132 2.4e-136 489.6 391 66.8
Cc06_g15810 Coffea canephora HOM05D005841 ORTHO05D007132 6.9e-136 488.0 416 64.4
Glyma.04G125600 Glycine max HOM05D005841 ORTHO05D007132 6.9e-136 488.0 411 63.7
Phvul.005G012800 Phaseolus vulgaris HOM05D005841 ORTHO05D007132 6.9e-136 488.0 411 63.0
Sabra01G0025200 Salix brachista HOM05D005841 ORTHO05D007132 9.1e-136 487.6 409 64.8
VMungo1080G1721 Vigna mungo HOM05D005841 ORTHO05D007132 9.1e-136 487.6 411 63.3
DCAR_019783 Daucus carota HOM05D005841 ORTHO05D007132 1.5e-135 486.9 405 63.7
Glyma.06G313000 Glycine max HOM05D005841 ORTHO05D007132 1.3e-134 483.8 411 63.0
MSTRG.26082 Avicennia marina HOM05D005841 ORTHO05D007132 6.5e-134 481.5 423 61.0
Potri.001G036400 Populus trichocarpa HOM05D005841 ORTHO05D007132 8.5e-134 481.1 409 64.1
Ciclev10001427m.g Citrus clementina HOM05D005841 ORTHO05D007132 3.2e-133 479.2 438 58.7
Lj3g0005753 Lotus japonicus HOM05D005841 ORTHO05D007132 1.2e-132 477.2 405 63.0
CiPaw.14G011500 Carya illinoinensis HOM05D005841 ORTHO05D007132 1.6e-132 476.9 412 73.3
Medtr3g011510 Medicago truncatula HOM05D005841 ORTHO05D007132 6.1e-132 474.9 407 62.2
Manes.04G153300 Manihot esculenta HOM05D005841 ORTHO05D007132 1.0e-131 474.2 407 64.1
Sabra03G0139600 Salix brachista HOM05D005841 ORTHO05D007132 1.4e-131 473.8 397 64.5
PSO339G0077 Papaver somniferum HOM05D005841 ORTHO05D007132 3.0e-131 472.6 412 61.7
PSO384G2928 Papaver somniferum HOM05D005841 ORTHO05D007132 3.9e-131 472.2 412 61.7
Lalb_Chr18g0048171 Lupinus albus HOM05D005841 ORTHO05D007132 6.7e-131 471.5 405 61.2
Gohir.A06G171000 Gossypium hirsutum HOM05D005841 ORTHO05D007132 3.3e-130 469.2 411 60.8
Gohir.D06G178900 Gossypium hirsutum HOM05D005841 ORTHO05D007132 5.7e-130 468.4 411 60.6
Gorai.010G208800 Gossypium raimondii HOM05D005841 ORTHO05D007132 1.7e-129 466.8 411 60.6
Sc20g0000960 Simmondsia chinensis HOM05D005841 ORTHO05D007132 4.8e-129 465.3 411 59.9
THA.LOC104809184 Tarenaya hassleriana HOM05D005841 ORTHO05D007132 8.2e-129 464.5 410 59.8
Lsat_1_v5_gn_5_163601 Lactuca sativa HOM05D005841 ORTHO05D007132 5.3e-128 461.8 410 67.1
COL.COLO4_09288 Corchorus olitorius HOM05D005841 ORTHO05D007132 2.0e-127 459.9 415 60.5
ECA248G0891 Erigeron canadensis HOM05D005841 ORTHO05D007132 2.0e-127 459.9 413 69.2
TWI38G1535 Tripterygium wilfordii HOM05D005841 ORTHO05D007132 4.5e-127 458.8 404 60.6
Ca_26913_v3 Cicer arietinum L. HOM05D005841 ORTHO05D007132 1.7e-126 456.8 392 62.5
unitig_699.g19444 Utricularia gibba HOM05D005841 ORTHO05D007132 3.8e-126 455.7 403 58.8
Thecc.10G128400 Theobroma cacao HOM05D005841 ORTHO05D007132 8.5e-126 454.5 406 59.6
GSVIVG01027370001 Vitis vinifera HOM05D005841 ORTHO05D007132 4.2e-125 452.2 415 60.2
HanXRQChr13g0390471 Helianthus annuus HOM05D005841 ORTHO05D007132 5.5e-125 451.8 371 64.7
Haze_02951 Corylus avellana HOM05D005841 ORTHO05D007132 7.2e-125 451.4 504 51.2
Duzib128G0994 Durio zibethinus HOM05D005841 ORTHO05D007132 9.4e-125 451.1 406 60.1
arahy.Tifrunner.gnm1.ann1.AX9XXP Arachis hypogaea HOM05D005841 ORTHO05D007132 4.7e-124 448.7 417 58.5
TWI15G0221 Tripterygium wilfordii HOM05D005841 ORTHO05D007132 4.7e-124 448.7 412 58.7
THA.LOC104824200 Tarenaya hassleriana HOM05D005841 ORTHO05D007132 8.0e-124 448.0 412 59.0
Hund07799 Selenicereus undatus HOM05D005841 ORTHO05D007132 5.2e-123 445.3 406 59.1
Eucgr.G03178 Eucalyptus grandis HOM05D005841 ORTHO05D007132 6.7e-123 444.9 437 59.5
Aa31sc488G20 Aethionema arabicum HOM05D005841 ORTHO05D007132 8.8e-123 444.5 401 59.4
TPR.G5121 Trifolium pratense HOM05D005841 ORTHO05D007132 1.1e-122 444.1 443 56.0
CANSAT56G0667 Cannabis sativa HOM05D005841 ORTHO05D007132 2.2e-121 439.9 427 54.8
Thhalv10010421m.g Eutrema salsugineum HOM05D005841 ORTHO05D007132 3.1e-120 436.0 445 55.7
MBI19_g24060_MAGBIO Magnolia biondii HOM05D005841 ORTHO05D007132 4.1e-120 435.6 415 66.5
CARHR164270 Cardamine hirsuta HOM05D005841 ORTHO05D007132 5.9e-119 431.8 302 72.8
AT3G54360 Arabidopsis thaliana HOM05D005841 ORTHO05D007132 7.7e-119 431.4 441 55.6
Sp5g08040 Schrenkiella parvula HOM05D005841 ORTHO05D007132 1.0e-118 431.0 305 71.5
EL10Ac9g20941 Beta vulgaris HOM05D005841 ORTHO05D007132 2.2e-118 429.9 390 57.7
Sed0011967 Sechium edule HOM05D005841 ORTHO05D007132 2.2e-118 429.9 312 69.9
BcaB02g07739 Brassica carinata HOM05D005841 ORTHO05D007132 1.1e-117 427.6 393 59.0
A09p47340 Brassica napus HOM05D005841 ORTHO05D007132 1.1e-117 427.6 303 72.3
Carub.0005s2096 Capsella rubella HOM05D005841 ORTHO05D007132 2.5e-117 426.4 305 71.1
C08p29570 Brassica napus HOM05D005841 ORTHO05D007132 3.2e-117 426.0 304 71.4
BolC8t50563H Brassica oleracea HOM05D005841 ORTHO05D007132 3.2e-117 426.0 304 71.4
BraA09t40195Z Brassica rapa HOM05D005841 ORTHO05D007132 3.2e-117 426.0 304 71.7
MELO3C011778.2 Cucumis melo HOM05D005841 ORTHO05D007132 3.2e-117 426.0 446 52.7
A07p22080 Brassica napus HOM05D005841 ORTHO05D007132 5.5e-117 425.2 304 71.1
BraA07t29891Z Brassica rapa HOM05D005841 ORTHO05D007132 5.5e-117 425.2 304 71.1
AL5G35420 Arabidopsis lyrata HOM05D005841 ORTHO05D007132 1.2e-116 424.1 305 71.1
CsaV3_5G029280 Cucumis sativus L. HOM05D005841 ORTHO05D007132 1.2e-116 424.1 305 69.2
Aqoxy3G04362 Aquilegia oxysepala HOM05D005841 ORTHO05D007132 4.7e-116 422.2 409 57.2
Sed0002293 Sechium edule HOM05D005841 ORTHO05D007132 6.1e-116 421.8 436 53.9
SGA_v2.0_scaffold69G23059 Striga asiatica HOM05D005841 ORTHO05D007132 4.0e-115 419.1 402 57.0
AUR62041651 Chenopodium quinoa HOM05D005841 ORTHO05D007132 5.2e-115 418.7 390 56.9
BcaB01g00199 Brassica carinata HOM05D005841 ORTHO05D007132 1.2e-114 417.5 423 56.0
Ah.07g203740 Amaranthus hybridus HOM05D005841 ORTHO05D007132 2.0e-114 416.8 398 56.5
arahy.Tifrunner.gnm1.ann1.87YK44 Arachis hypogaea HOM05D005841 ORTHO05D007132 8.3e-113 411.4 421 55.1
Migut.J01841 Erythranthe guttata HOM05D005841 ORTHO05D007132 1.1e-112 411.0 404 55.9
Zm00001eb126920 Zea mays HOM05D005841 ORTHO05D007132 1.4e-112 410.6 302 67.2
Psat5g225080 Pisum sativum HOM05D005841 ORTHO05D007132 2.7e-111 406.4 357 61.1
Nn2g15922 Nelumbo nucifera HOM05D005841 ORTHO05D007132 1.3e-110 404.1 292 69.9
AUR62035532 Chenopodium quinoa HOM05D005841 ORTHO05D007132 2.2e-110 403.3 390 55.9
CDE02G3427 Ceratophyllum demersum HOM05D005841 ORTHO05D007132 5.0e-110 402.1 311 66.2
Os01g0104100 Oryza sativa ssp. japonica HOM05D005841 ORTHO05D007132 3.6e-108 396.0 411 54.0
SEGI_15550 Sequoiadendron giganteum HOM05D005841 ORTHO05D007132 3.0e-107 392.9 422 51.9
MD07G1085200 Malus domestica HOM05D005841 ORTHO05D007132 1.2e-106 391.0 414 53.1
Prupe.2G051700 Prunus persica HOM05D005841 ORTHO05D007132 6.3e-105 385.2 415 52.5
C06p22120 Brassica napus HOM05D005841 ORTHO05D007132 5.4e-104 382.1 292 67.5
BolC6t37399H Brassica oleracea HOM05D005841 ORTHO05D007132 5.4e-104 382.1 292 67.5
ClCG11G012870 Citrullus lanatus HOM05D005841 ORTHO05D007132 2.7e-103 379.8 311 63.7
RcHm_v2.0_Chr1g0330051 Rosa chinensis HOM05D005841 ORTHO05D007132 1.7e-102 377.1 409 52.3
FvH4_7g04620 Fragaria vesca HOM05D005841 ORTHO05D007132 2.3e-102 376.7 404 53.5
BcaC08g44679 Brassica carinata HOM05D005841 ORTHO05D007132 4.2e-101 372.5 409 52.6
FAN03G2595 Fragaria x ananassa HOM05D005841 ORTHO05D007132 3.4e-98 362.8 389 53.5
FAN06G4202 Fragaria x ananassa HOM05D005841 ORTHO05D007132 3.4e-98 362.8 389 53.5
FAN06G1077 Fragaria x ananassa HOM05D005841 ORTHO05D007132 7.5e-98 361.7 389 53.2
FAN10G3225 Fragaria x ananassa HOM05D005841 ORTHO05D007132 1.3e-97 360.9 389 53.2
FAN01G0675 Fragaria x ananassa HOM05D005841 ORTHO05D007132 1.1e-96 357.8 389 53.0
Pp3c4_17260 Physcomitrium patens HOM05D005841 ORTHO05D007132 3.9e-94 349.4 301 58.1
Os02g0795300 Oryza sativa ssp. japonica HOM05D005841 ORTHO05D007132 6.2e-92 342.0 412 47.6
Mapoly0042s0033 Marchantia polymorpha HOM05D005841 ORTHO05D007132 2.2e-89 333.6 410 46.1
Gorai.011G224300 Gossypium raimondii HOM05D005841 ORTHO05D007132 4.9e-89 332.4 271 63.5
CSS0023245 Camellia sinensis var. sinensis HOM05D005841 ORTHO05D007132 9.2e-88 328.2 261 65.9
AagrBONN_evm.TU.Sc2ySwM_344.2135 Anthoceros agrestis HOM05D005841 ORTHO05D007132 9.5e-85 318.2 335 50.1
AUR62039567 Chenopodium quinoa HOM05D005841 ORTHO05D007132 4.3e-77 292.7 412 45.1
SMO194G0025 Selaginella moellendorffii HOM05D005841 ORTHO05D007132 1.2e-76 291.2 302 51.0
Ah.15g098060 Amaranthus hybridus HOM05D005841 ORTHO05D007132 4.3e-69 266.2 283 51.6
AUR62041645 Chenopodium quinoa HOM05D005841 ORTHO05D007132 1.1e-64 251.5 262 52.7
ATR0068G039 Amborella trichopoda HOM05D005841 ORTHO05D007132 2.3e-62 243.8 264 51.1
HPP92_001714 Vanilla planifolia HOM05D005841 ORTHO05D007132 1.5e-53 214.5 255 49.4
Gohir.D10G200101 Gossypium hirsutum HOM05D005841 ORTHO05D007132 1.4e-51 208.0 150 68.0
Cpa.g.sc33.143 Carica papaya HOM05D005841 ORTHO05D007132 3.8e-49 199.9 158 64.6
CBR_g19049 Chara braunii HOM05D005841 ORTHO05D007132 7.1e-48 195.7 364 34.9
Hma1.2p1_3953F.1_g338070 Hydrangea macrophylla HOM05D005841 ORTHO05D007132 2.1e-47 194.1 148 70.3
FAN03G2434 Fragaria x ananassa HOM05D005841 ORTHO05D007132 4.9e-41 172.9 128 68.8
TAR629G2175 Trochodendron aralioides HOM05D005841 ORTHO05D007132 4.9e-41 172.9 124 71.8
Gohir.D10G200050 Gossypium hirsutum HOM05D005841 ORTHO05D007132 1.3e-36 158.3 116 69.0
SEGI_12352 Sequoiadendron giganteum HOM05D005841 ORTHO05D007132 1.8e-35 154.5 114 65.8
Hma1.2p1_3953F.1_g338060 Hydrangea macrophylla HOM05D005841 ORTHO05D007132 3.1e-27 127.1 79 77.2
Lsat_1_v5_gn_1_17940 Lactuca sativa HOM05D005841 ORTHO05D007132 3.3e-21 107.1 73 74.0
SEGI_26376 Sequoiadendron giganteum HOM05D005841 ORTHO05D007132 1.4e-19 101.7 149 42.3
ATR0068G030 Amborella trichopoda HOM05D005841 ORTHO05D007132 2.6e-13 80.9 66 60.6
Psat0s5799g0040 Pisum sativum HOM05D005841 ORTHO05D007132 2.9e-09 67.4 72 50.0
TPR.G5122 Trifolium pratense HOM05D003377 ORTHO05D004080 4.7e-07 60.1 49 63.3
Cre03.g172600 Chlamydomonas reinhardtii HOM05D005841 ORTHO05D007132 1.0e-06 58.9 68 35.3
Psat7g004640 Pisum sativum HOM05D000860 ORTHO05D005731 1.0e-06 58.9 50 60.0


User provided reference genes

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