Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004439g0090 Nicotiana tabacum HOM05D008240 ORTHO05D010333 2.7e-55 218.4 107 100.0
Nitab4.5_0000084g0100 Nicotiana tabacum HOM05D008240 ORTHO05D010333 4.2e-16 88.2 94 54.3
Dinv28418 Davidia involucrata HOM05D008240 ORTHO05D002863 2.8e-12 75.5 56 66.1
Solyc03g025480.4 Solanum lycopersicum HOM05D008240 ORTHO05D010333 3.1e-11 72.0 43 81.4
Sopen03g004320 Solanum pennellii HOM05D008240 ORTHO05D010333 3.1e-11 72.0 43 81.4
PGSC0003DMG400015797 Solanum tuberosum HOM05D008240 ORTHO05D010333 3.1e-11 72.0 43 81.4
arahy.Tifrunner.gnm1.ann1.ES0TVM Arachis hypogaea HOM05D008240 ORTHO05D010333 5.3e-11 71.2 43 76.7
Peaxi162Scf00444g00412 Petunia axillaris HOM05D008240 ORTHO05D010333 9.0e-11 70.5 35 91.4
arahy.Tifrunner.gnm1.ann1.MUHC0Z Arachis hypogaea HOM05D002671 ORTHO05D010333 2.0e-10 69.3 43 74.4
Haze_00010 Corylus avellana HOM05D008240 ORTHO05D010333 5.8e-10 67.8 50 62.0
CiPaw.06G002300 Carya illinoinensis HOM05D008240 ORTHO05D010333 1.7e-09 66.2 47 66.0
TPR.G27012 Trifolium pratense HOM05D008240 ORTHO05D010333 2.9e-09 65.5 39 76.9
CAN.G1175.10 Capsicum annuum HOM05D008240 ORTHO05D010333 3.8e-09 65.1 36 80.6
Hma1.2p1_0227F.1_g095850 Hydrangea macrophylla HOM05D008240 ORTHO05D010333 4.9e-09 64.7 44 68.2
Psat6g197280 Pisum sativum HOM05D008240 ORTHO05D010333 6.5e-09 64.3 43 67.4
Atru.chr1.425 Acer truncatum HOM05D008240 ORTHO05D010333 1.4e-08 63.2 36 77.8
Medtr1g100890 Medicago truncatula HOM05D008240 ORTHO05D010333 1.4e-08 63.2 46 63.0
Sc13g0008860 Simmondsia chinensis HOM05D008240 ORTHO05D010333 1.9e-08 62.8 44 65.9
CSS0023725 Camellia sinensis var. sinensis HOM05D008240 ORTHO05D010333 3.2e-08 62.0 31 83.9
Cpa.g.sc107.72 Carica papaya HOM05D008240 ORTHO05D010333 4.2e-08 61.6 35 74.3
Lalb_Chr21g0305111 Lupinus albus HOM05D008240 ORTHO05D010333 4.2e-08 61.6 35 77.1
Manes.06G149600 Manihot esculenta HOM05D008240 ORTHO05D010333 4.2e-08 61.6 34 79.4
Manes.14G024900 Manihot esculenta HOM05D008240 ORTHO05D010333 4.2e-08 61.6 36 75.0
DCAR_020258 Daucus carota HOM05D008240 ORTHO05D010333 5.5e-08 61.2 31 80.6
Potri.001G178400 Populus trichocarpa HOM05D008240 ORTHO05D010333 9.3e-08 60.5 45 62.2
Prupe.2G297100 Prunus persica HOM05D008240 ORTHO05D010333 9.3e-08 60.5 34 76.5
vmacro06659 Vaccinium macrocarpon HOM05D000206 ORTHO05D002863 9.3e-08 60.5 35 77.1
VMungo1127G0785 Vigna mungo HOM05D008240 ORTHO05D010333 9.3e-08 60.5 34 76.5
Actinidia34129 Actinidia chinensis HOM05D000206 ORTHO05D002863 1.2e-07 60.1 34 73.5
FvH4_7g29780 Fragaria vesca HOM05D008240 ORTHO05D010333 1.2e-07 60.1 35 74.3
Ciclev10006392m.g Citrus clementina HOM05D008240 ORTHO05D010333 1.6e-07 59.7 43 65.1
Glyma.12G005800 Glycine max HOM05D008240 ORTHO05D010333 1.6e-07 59.7 34 76.5
Phvul.011G006600 Phaseolus vulgaris HOM05D008240 ORTHO05D010333 1.6e-07 59.7 34 76.5
RcHm_v2.0_Chr1g0377781 Rosa chinensis HOM05D008240 ORTHO05D010333 1.6e-07 59.7 39 66.7
Sabra01G0148200 Salix brachista HOM05D008240 ORTHO05D010333 1.6e-07 59.7 40 65.0
COL.COLO4_03572 Corchorus olitorius HOM05D008240 ORTHO05D010333 2.1e-07 59.3 36 72.2
COL.COLO4_28004 Corchorus olitorius HOM05D008240 ORTHO05D010333 2.1e-07 59.3 36 72.2
Migut.F01103 Erythranthe guttata HOM05D008240 ORTHO05D010333 2.1e-07 59.3 43 67.4
Lsat_1_v5_gn_9_55121 Lactuca sativa HOM05D008240 ORTHO05D010333 2.1e-07 59.3 34 76.5
GSVIVG01028913001 Vitis vinifera HOM05D008240 ORTHO05D010333 2.7e-07 58.9 41 63.4
Nn6g33426 Nelumbo nucifera HOM05D008240 ORTHO05D010333 3.5e-07 58.5 47 59.6
Oeu045392.1 Olea europaea HOM05D008240 ORTHO05D010333 3.5e-07 58.5 36 72.2
AUR62021162 Chenopodium quinoa HOM05D008240 ORTHO05D010333 4.6e-07 58.2 35 74.3
Gohir.A12G256400 Gossypium hirsutum HOM05D008240 ORTHO05D010333 4.6e-07 58.2 35 71.4
Gohir.D12G257700 Gossypium hirsutum HOM05D008240 ORTHO05D010333 4.6e-07 58.2 35 71.4
Gorai.008G276000 Gossypium raimondii HOM05D008240 ORTHO05D010333 4.6e-07 58.2 35 71.4
EL10Ac3g05605 Beta vulgaris HOM05D008240 ORTHO05D010333 7.9e-07 57.4 102 37.3
EL10Ac3g05606 Beta vulgaris HOM05D008240 ORTHO05D010333 7.9e-07 57.4 35 68.6
QL07p048914 Quercus lobata HOM05D008240 ORTHO05D010333 7.9e-07 57.4 54 55.6
Thecc.03G179600 Theobroma cacao HOM05D008240 ORTHO05D010333 7.9e-07 57.4 34 73.5
Glyma.09G230900 Glycine max HOM05D008240 ORTHO05D010333 1.0e-06 57.0 34 73.5


User provided reference genes

Program Settings