Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004438g0100 Nicotiana tabacum HOM05D003821 ORTHO05D004449 1.6e-58 229.2 116 100.0
Nitab4.5_0003546g0070 Nicotiana tabacum HOM05D003821 ORTHO05D004449 9.1e-25 117.1 114 58.8
Nitab4.5_0000570g0120 Nicotiana tabacum HOM05D003821 ORTHO05D004449 1.2e-24 116.7 100 65.0
CAN.G185.14 Capsicum annuum HOM05D003821 ORTHO05D004449 8.5e-23 110.5 93 64.5
Nitab4.5_0000191g0110 Nicotiana tabacum HOM05D003821 ORTHO05D004449 1.1e-22 110.2 114 57.9
CAN.G484.32 Capsicum annuum HOM05D003821 ORTHO05D004449 3.6e-21 105.1 133 56.4
Oeu027727.1 Olea europaea HOM05D003821 ORTHO05D004449 1.4e-20 103.2 95 60.0
Hma1.2p1_0078F.1_g040550 Hydrangea macrophylla HOM05D003821 ORTHO05D004449 4.0e-20 101.7 93 60.2
Oeu026313.1 Olea europaea HOM05D003821 ORTHO05D004449 4.0e-20 101.7 97 60.8
Rhsim02G0009100 Rhododendron simsii HOM05D003821 ORTHO05D004449 5.2e-20 101.3 102 57.8
FAN07G0841 Fragaria x ananassa HOM05D003821 ORTHO05D004449 1.2e-19 100.1 91 61.5
SGA_v2.0_scaffold91G27999 Striga asiatica HOM05D003821 ORTHO05D004449 3.4e-19 98.6 114 49.1
vmacro15236 Vaccinium macrocarpon HOM05D003821 ORTHO05D004449 4.4e-19 98.2 111 56.8
DCAR_013986 Daucus carota HOM05D003821 ORTHO05D004449 5.7e-19 97.8 103 58.3
MSTRG.24794 Avicennia marina HOM05D003821 ORTHO05D004449 7.5e-19 97.4 93 55.9
MSTRG.3917 Avicennia marina HOM05D003821 ORTHO05D004449 2.8e-18 95.5 99 53.5
SGA_v2.0_scaffold147G36288 Striga asiatica HOM05D003821 ORTHO05D004449 1.8e-17 92.8 96 53.1
SGA_v2.0_scaffold428G51522 Striga asiatica HOM05D003821 ORTHO05D004449 3.1e-17 92.0 93 54.8
Migut.G00164 Erythranthe guttata HOM05D003821 ORTHO05D004449 4.1e-17 91.7 95 53.7
vmacro08148 Vaccinium macrocarpon HOM05D003821 ORTHO05D004449 1.2e-16 90.1 153 41.2
PGSC0003DMG400022856 Solanum tuberosum HOM05D003821 ORTHO05D004449 4.5e-16 88.2 118 44.9
TWI09G0102 Tripterygium wilfordii HOM05D003821 ORTHO05D004449 1.0e-15 87.0 94 52.1
TWI53G1984 Tripterygium wilfordii HOM05D003821 ORTHO05D004449 1.7e-15 86.3 94 51.1
Rhsim04G0221500 Rhododendron simsii HOM05D003821 ORTHO05D004449 2.2e-15 85.9 143 42.7
Manes.15G012400 Manihot esculenta HOM05D003821 ORTHO05D004449 2.9e-15 85.5 93 51.6
BraA08t33190Z Brassica rapa HOM05D003821 ORTHO05D004449 5.0e-15 84.7 112 49.1
Atru.chr4.2835 Acer truncatum HOM05D003821 ORTHO05D004449 8.5e-15 84.0 135 43.7
A03p49340 Brassica napus HOM05D003821 ORTHO05D004449 8.5e-15 84.0 118 44.9
FAN27G2508 Fragaria x ananassa HOM05D003821 ORTHO05D004449 1.1e-14 83.6 92 50.0
A08p11990 Brassica napus HOM05D003821 ORTHO05D004449 1.5e-14 83.2 93 58.1
FAN15G2810 Fragaria x ananassa HOM05D003821 ORTHO05D004449 1.5e-14 83.2 84 54.8
FAN24G2279 Fragaria x ananassa HOM05D003821 ORTHO05D004449 1.5e-14 83.2 84 54.8
FAN12G1096 Fragaria x ananassa HOM05D003821 ORTHO05D004449 1.9e-14 82.8 91 52.7
FAN20G2567 Fragaria x ananassa HOM05D000897 ORTHO05D000716 2.5e-14 82.4 105 49.5
Sed0001615 Sechium edule HOM05D003821 ORTHO05D004449 2.5e-14 82.4 101 48.5
TPR.G9594 Trifolium pratense HOM05D003821 ORTHO05D004449 3.2e-14 82.0 117 46.2
Haze_04896 Corylus avellana HOM05D003821 ORTHO05D004449 7.2e-14 80.9 107 49.5
CARHR290310 Cardamine hirsuta HOM05D003821 ORTHO05D004449 9.4e-14 80.5 94 51.1
Actinidia32231 Actinidia chinensis HOM05D003821 ORTHO05D004449 1.2e-13 80.1 92 53.3
AT4G15802 Arabidopsis thaliana HOM05D003821 ORTHO05D004449 1.2e-13 80.1 94 48.9
Carub.0007s2585 Capsella rubella HOM05D003821 ORTHO05D004449 1.2e-13 80.1 89 50.6
Psat3g022560 Pisum sativum HOM05D003821 ORTHO05D004449 1.2e-13 80.1 97 49.5
QL10p053326 Quercus lobata HOM05D003821 ORTHO05D004449 1.2e-13 80.1 105 46.7
QL10p054532 Quercus lobata HOM05D003821 ORTHO05D004449 1.2e-13 80.1 105 46.7
AL7G39490 Arabidopsis lyrata HOM05D003821 ORTHO05D004449 1.6e-13 79.7 94 48.9
Haze_01204 Corylus avellana HOM05D003821 ORTHO05D004449 2.1e-13 79.3 106 46.2
Peaxi162Scf00048g00209 Petunia axillaris HOM05D003821 ORTHO05D004449 2.7e-13 79.0 85 52.9
CiPaw.07G106400 Carya illinoinensis HOM05D003821 ORTHO05D004449 3.6e-13 78.6 86 51.2
SalBow2G1159 Salvia bowleyana HOM05D003821 ORTHO05D004449 6.1e-13 77.8 99 50.5
AUR62008616 Chenopodium quinoa HOM05D003821 ORTHO05D004449 8.0e-13 77.4 91 47.3
COL.COLO4_13871 Corchorus olitorius HOM05D003821 ORTHO05D004449 8.0e-13 77.4 93 47.3
Ah.04g153550 Amaranthus hybridus HOM05D003821 ORTHO05D004449 1.4e-12 76.6 94 48.9
BraA01t02079Z Brassica rapa HOM05D000802 ORTHO05D013138 1.8e-12 76.3 111 48.6
Medtr1g088760 Medicago truncatula HOM05D003821 ORTHO05D004449 1.8e-12 76.3 115 40.9
Hund20554 Selenicereus undatus HOM05D003821 ORTHO05D004449 1.8e-12 76.3 112 43.8
arahy.Tifrunner.gnm1.ann1.UD53LE Arachis hypogaea HOM05D003821 ORTHO05D004449 2.3e-12 75.9 86 53.5
Cpa.g.sc9.208 Carica papaya HOM05D003821 ORTHO05D004449 4.0e-12 75.1 104 45.2
Sc24g0003850 Simmondsia chinensis HOM05D000714 ORTHO05D000544 4.0e-12 75.1 110 42.7
CiPaw.08G097300 Carya illinoinensis HOM05D003821 ORTHO05D004449 5.2e-12 74.7 96 43.8
TAR362G0968 Trochodendron aralioides HOM05D003821 ORTHO05D004449 5.2e-12 74.7 91 48.4
AUR62033168 Chenopodium quinoa HOM05D003821 ORTHO05D004449 6.8e-12 74.3 91 46.2
VMungo1309G1076 Vigna mungo HOM05D003821 ORTHO05D004449 6.8e-12 74.3 86 50.0
A01p21700 Brassica napus HOM05D000802 ORTHO05D013138 8.8e-12 73.9 99 50.5
Phvul.009G247900 Phaseolus vulgaris HOM05D003821 ORTHO05D004449 8.8e-12 73.9 79 50.6
Sabra08G0153500 Salix brachista HOM05D003821 ORTHO05D004449 8.8e-12 73.9 128 41.4
TPR.G33980 Trifolium pratense HOM05D003821 ORTHO05D004449 8.8e-12 73.9 97 46.4
FAN17G0959 Fragaria x ananassa HOM05D003821 ORTHO05D004449 1.2e-11 73.6 88 51.1
Aa31LG10G6300 Aethionema arabicum HOM05D003821 ORTHO05D004449 1.5e-11 73.2 127 41.7
CSS0027872 Camellia sinensis var. sinensis HOM05D003821 ORTHO05D004449 2.0e-11 72.8 47 76.6
BcaNung00244 Brassica carinata HOM05D000802 ORTHO05D013138 2.6e-11 72.4 102 43.1
arahy.Tifrunner.gnm1.ann1.LH51N9 Arachis hypogaea HOM05D003821 ORTHO05D004449 3.4e-11 72.0 100 46.0
BcaC06g32965 Brassica carinata HOM05D003821 ORTHO05D004449 3.4e-11 72.0 87 48.3
Ca_10352_v3 Cicer arietinum L. HOM05D003821 ORTHO05D004449 4.4e-11 71.6 93 43.0
BolC7t45268H Brassica oleracea HOM05D003821 ORTHO05D004449 9.8e-11 70.5 96 49.0
BcaB04g18333 Brassica carinata HOM05D003821 ORTHO05D004449 1.3e-10 70.1 97 49.5
BcaC06g33446 Brassica carinata HOM05D003821 ORTHO05D004449 1.7e-10 69.7 87 47.1
BcaC07g37933 Brassica carinata HOM05D003821 ORTHO05D004449 1.7e-10 69.7 93 51.6
Gorai.004G142200 Gossypium raimondii HOM05D003821 ORTHO05D004449 2.2e-10 69.3 130 39.2
BraA03t14035Z Brassica rapa HOM05D003821 ORTHO05D004449 2.8e-10 68.9 92 48.9
DCAR_002813 Daucus carota HOM05D003821 ORTHO05D004449 4.8e-10 68.2 90 46.7
ClCG09G006050 Citrullus lanatus HOM05D003821 ORTHO05D004449 1.1e-09 67.0 74 48.6
RcHm_v2.0_Chr6g0293541 Rosa chinensis HOM05D003821 ORTHO05D004449 1.1e-09 67.0 108 39.8
Thecc.04G284600 Theobroma cacao HOM05D003821 ORTHO05D004449 1.1e-09 67.0 91 40.7
Nn4g25849 Nelumbo nucifera HOM05D003821 ORTHO05D004449 1.4e-09 66.6 95 45.3
Medtr7g108610 Medicago truncatula HOM05D003821 ORTHO05D004449 3.1e-09 65.5 57 61.4
Os06g0274000 Oryza sativa ssp. japonica HOM05D003821 ORTHO05D004449 1.6e-08 63.2 93 44.1
RcHm_v2.0_Chr4g0422221 Rosa chinensis HOM05D003821 ORTHO05D004449 1.6e-08 63.2 44 72.7
TWI79G0264 Tripterygium wilfordii HOM05D003821 ORTHO05D004449 3.5e-08 62.0 84 40.5
EL10Ac7g17441 Beta vulgaris HOM05D003821 ORTHO05D004449 4.5e-08 61.6 141 30.5
CANSAT78G0465 Cannabis sativa HOM05D003821 ORTHO05D004449 5.9e-08 61.2 91 40.7
Ciclev10007067m.g Citrus clementina HOM05D003821 ORTHO05D004449 5.9e-08 61.2 128 34.4
FvH4_4g18020 Fragaria vesca HOM05D003821 ORTHO05D004449 1.0e-07 60.5 91 44.0
unitig_32.g10644 Utricularia gibba HOM05D003821 ORTHO05D004449 1.0e-07 60.5 37 78.4
C07p47410 Brassica napus HOM05D003821 ORTHO05D004449 1.3e-07 60.1 116 39.7
Glyma.03G213100 Glycine max HOM05D003821 ORTHO05D004449 2.3e-07 59.3 68 51.5
Migut.N00088 Erythranthe guttata HOM05D003821 ORTHO05D004449 2.9e-07 58.9 92 41.3
Hma1.2p1_0209F.1_g088610 Hydrangea macrophylla HOM05D003821 ORTHO05D004449 8.6e-07 57.4 59 54.2
ATR0580G132 Amborella trichopoda HOM05D003821 ORTHO05D004449 1.9e-06 56.2 103 40.8
Aqoxy1G02453 Aquilegia oxysepala HOM05D036700 ORTHO05D004449 5.5e-06 54.7 114 36.0
Thhalv10027508m.g Eutrema salsugineum HOM05D003821 ORTHO05D004449 9.5e-06 53.9 49 63.3


User provided reference genes

Program Settings