Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004438g0050 Nicotiana tabacum HOM05D004268 ORTHO05D004958 7.7e-37 157.1 112 100.0
Nitab4.5_0000570g0060 Nicotiana tabacum HOM05D004268 ORTHO05D004958 1.0e-28 130.2 112 88.4
Solyc12g099650.2 Solanum lycopersicum HOM05D004268 ORTHO05D004958 2.2e-23 112.5 115 83.5
PGSC0003DMG400004639 Solanum tuberosum HOM05D004268 ORTHO05D004958 2.6e-21 105.5 114 75.4
Peaxi162Scf00004g00263 Petunia axillaris HOM05D004268 ORTHO05D004958 8.0e-18 94.0 109 54.1
Peaxi162Scf00032g00063 Petunia axillaris HOM05D004268 ORTHO05D004958 5.7e-16 87.8 110 51.8
Potri.009G052500 Populus trichocarpa HOM05D004268 ORTHO05D004958 1.5e-11 73.2 110 59.1
Lsat_1_v5_gn_6_25460 Lactuca sativa HOM05D004268 ORTHO05D004958 2.5e-11 72.4 114 51.8
Potri.001G256900 Populus trichocarpa HOM05D004268 ORTHO05D004958 3.2e-11 72.0 109 51.4
Gohir.A09G113900 Gossypium hirsutum HOM05D004268 ORTHO05D004958 4.2e-11 71.6 110 41.8
Gohir.D09G110500 Gossypium hirsutum HOM05D004268 ORTHO05D004958 4.2e-11 71.6 110 41.8
Psat7g196400 Pisum sativum HOM05D004268 ORTHO05D004958 1.2e-10 70.1 109 42.2
Manes.06G163500 Manihot esculenta HOM05D004268 ORTHO05D004958 2.1e-10 69.3 109 44.0
Cc06_g23280 Coffea canephora HOM05D004268 ORTHO05D004958 3.6e-10 68.6 110 47.3
Haze_23147 Corylus avellana HOM05D004268 ORTHO05D004958 6.1e-10 67.8 111 42.3
DCAR_029953 Daucus carota HOM05D004268 ORTHO05D004958 6.1e-10 67.8 111 44.1
PGR102G2953 Punica granatum HOM05D004268 ORTHO05D004958 8.0e-10 67.4 113 41.6
CiPaw.14G118100 Carya illinoinensis HOM05D004268 ORTHO05D004958 1.8e-09 66.2 111 40.5
Prupe.4G250700 Prunus persica HOM05D004268 ORTHO05D004958 2.3e-09 65.9 110 60.0
TPR.G35305 Trifolium pratense HOM05D004268 ORTHO05D004958 2.3e-09 65.9 108 40.7
Medtr4g037505 Medicago truncatula HOM05D004268 ORTHO05D004958 3.0e-09 65.5 109 41.3
Manes.14G003500 Manihot esculenta HOM05D004268 ORTHO05D004958 4.0e-09 65.1 110 55.5
QL01p004491 Quercus lobata HOM05D004268 ORTHO05D004958 4.0e-09 65.1 113 54.0
QL01p004584 Quercus lobata HOM05D004268 ORTHO05D004958 4.0e-09 65.1 113 39.8
Psat5g208760 Pisum sativum HOM05D004268 ORTHO05D004958 6.8e-09 64.3 110 41.8
Aa31LG10G3570 Aethionema arabicum HOM05D004268 ORTHO05D004958 8.8e-09 63.9 116 39.7
Cfa009783 Carpinus fangiana HOM05D004268 ORTHO05D004958 8.8e-09 63.9 109 41.3
Actinidia23976 Actinidia chinensis HOM05D004268 ORTHO05D004958 1.2e-08 63.5 114 43.9
ECA233G4176 Erigeron canadensis HOM05D004268 ORTHO05D004958 1.2e-08 63.5 115 53.0
FAN21G1561 Fragaria x ananassa HOM05D004268 ORTHO05D004958 1.2e-08 63.5 109 56.0
VMungo1127G0621 Vigna mungo HOM05D004268 ORTHO05D004958 1.2e-08 63.5 107 41.1
CiPaw.13G159300 Carya illinoinensis HOM05D004268 ORTHO05D004958 1.5e-08 63.2 111 42.3
Medtr3g030850 Medicago truncatula HOM05D004268 ORTHO05D004958 1.5e-08 63.2 109 40.4
TWI34G1192 Tripterygium wilfordii HOM05D004268 ORTHO05D004958 2.0e-08 62.8 108 46.3
Thhalv10011883m.g Eutrema salsugineum HOM05D004268 ORTHO05D004958 2.6e-08 62.4 109 38.5
Phvul.011G009700 Phaseolus vulgaris HOM05D004268 ORTHO05D004958 3.4e-08 62.0 107 40.2
DCAR_002077 Daucus carota HOM05D004268 ORTHO05D004958 4.4e-08 61.6 117 44.4
Lj3g0019333 Lotus japonicus HOM05D004268 ORTHO05D004958 4.4e-08 61.6 110 41.8
Medtr3g030860 Medicago truncatula HOM05D004268 ORTHO05D004958 4.4e-08 61.6 108 39.8
TPR.G35302 Trifolium pratense HOM05D004268 ORTHO05D004958 4.4e-08 61.6 109 40.4
COL.COLO4_06120 Corchorus olitorius HOM05D004268 ORTHO05D004958 5.7e-08 61.2 109 46.8
Glyma.10G089300 Glycine max HOM05D004268 ORTHO05D004958 5.7e-08 61.2 109 43.1
HanXRQChr02g0052031 Helianthus annuus HOM05D004268 ORTHO05D004958 7.5e-08 60.8 112 41.1
HanXRQChr13g0401101 Helianthus annuus HOM05D004268 ORTHO05D004958 7.5e-08 60.8 113 60.2
MD11G1191900 Malus domestica HOM05D004268 ORTHO05D004958 9.8e-08 60.5 111 49.5
Thecc.09G235200 Theobroma cacao HOM05D004268 ORTHO05D004958 9.8e-08 60.5 108 51.9
Ca_14452_v3 Cicer arietinum L. HOM05D003957 ORTHO05D004833 1.3e-07 60.1 108 39.8
Ca_14453_v3 Cicer arietinum L. HOM05D003957 ORTHO05D004833 1.3e-07 60.1 108 39.8
Duzib150G0004 Durio zibethinus HOM05D004268 ORTHO05D004958 1.3e-07 60.1 109 39.4
FvH4_3g28710 Fragaria vesca HOM05D004268 ORTHO05D004958 1.3e-07 60.1 108 53.7
FAN11G3362 Fragaria x ananassa HOM05D004268 ORTHO05D004958 1.3e-07 60.1 108 53.7
MD03G1173700 Malus domestica HOM05D004268 ORTHO05D004958 1.3e-07 60.1 112 56.2
RcHm_v2.0_Chr5g0052351 Rosa chinensis HOM05D004268 ORTHO05D004958 1.3e-07 60.1 108 42.6
DCAR_031628 Daucus carota HOM05D004268 ORTHO05D004958 1.7e-07 59.7 117 41.9
Hma1.2p1_0368F.1_g137310 Hydrangea macrophylla HOM05D004268 ORTHO05D004958 1.7e-07 59.7 112 41.1
AL1G59250 Arabidopsis lyrata HOM05D004268 ORTHO05D004958 2.2e-07 59.3 113 38.9
TPR.G3668 Trifolium pratense HOM05D004268 ORTHO05D004958 2.2e-07 59.3 108 40.7
CANSAT54G2544 Cannabis sativa HOM05D004268 ORTHO05D004958 2.8e-07 58.9 111 55.0
Duzib168G1465 Durio zibethinus HOM05D004268 ORTHO05D004958 2.8e-07 58.9 109 39.4
FAN16G2720 Fragaria x ananassa HOM05D004268 ORTHO05D004958 2.8e-07 58.9 109 56.0
FAN25G2913 Fragaria x ananassa HOM05D004268 ORTHO05D004958 2.8e-07 58.9 109 42.2
Lj3g0003624 Lotus japonicus HOM05D004268 ORTHO05D004958 2.8e-07 58.9 108 42.6
CARHR041550 Cardamine hirsuta HOM05D004268 ORTHO05D004958 4.8e-07 58.2 113 38.1
AUR62000132 Chenopodium quinoa HOM05D004268 ORTHO05D004958 4.8e-07 58.2 107 41.1
QL04p008292 Quercus lobata HOM05D004268 ORTHO05D004958 6.3e-07 57.8 109 41.3
EL10Ac4g10238 Beta vulgaris HOM05D004268 ORTHO05D004958 8.3e-07 57.4 110 40.9
Ciclev10017247m.g Citrus clementina HOM05D004268 ORTHO05D004958 8.3e-07 57.4 113 46.9
Cpa.g.sc84.45 Carica papaya HOM05D004268 ORTHO05D004958 1.1e-06 57.0 109 40.4
Migut.D00609 Erythranthe guttata HOM05D004268 ORTHO05D004958 1.1e-06 57.0 30 86.7
Rhsim01G0192200 Rhododendron simsii HOM05D004268 ORTHO05D004958 1.1e-06 57.0 108 37.0
AUR62019312 Chenopodium quinoa HOM05D004268 ORTHO05D004958 1.4e-06 56.6 107 41.1
Glyma.15G275600 Glycine max HOM05D004268 ORTHO05D004958 1.8e-06 56.2 109 36.7
Sed0017781 Sechium edule HOM05D004268 ORTHO05D004958 1.8e-06 56.2 109 37.6
Cpa.g.sc125.13 Carica papaya HOM05D004268 ORTHO05D004958 2.4e-06 55.8 108 38.9
AT1G51400 Arabidopsis thaliana HOM05D004268 ORTHO05D004958 3.1e-06 55.5 109 35.8
MBI02_g05661_MAGBIO Magnolia biondii HOM05D004268 ORTHO05D004958 3.1e-06 55.5 114 36.8
Nitab4.5_0002741g0110 Nicotiana tabacum HOM05D004268 ORTHO05D004958 4.1e-06 55.1 29 82.8
BcaC08g43309 Brassica carinata HOM05D004268 ORTHO05D004958 5.4e-06 54.7 113 37.2
C06p06560 Brassica napus HOM05D004268 ORTHO05D004958 5.4e-06 54.7 113 37.2
BolC6t35768H Brassica oleracea HOM05D004268 ORTHO05D004958 5.4e-06 54.7 113 37.2
Nitab4.5_0002741g0120 Nicotiana tabacum HOM05D004268 ORTHO05D004958 5.4e-06 54.7 109 34.9
Thhalv10021813m.g Eutrema salsugineum HOM05D004268 ORTHO05D004958 7.0e-06 54.3 109 35.8
A06p02510 Brassica napus HOM05D004268 ORTHO05D004958 9.1e-06 53.9 109 33.9
CSS0050517 Camellia sinensis var. sinensis HOM05D004268 ORTHO05D004958 9.1e-06 53.9 116 53.4
Nitab4.5_0004741g0020 Nicotiana tabacum HOM05D004268 ORTHO05D004958 9.1e-06 53.9 96 34.4
TWI32G0064 Tripterygium wilfordii HOM05D004268 ORTHO05D004958 9.1e-06 53.9 107 55.1


User provided reference genes

Program Settings