Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004435g0030 Nicotiana tabacum HOM05D011531 ORTHO05D012843 1.6e-59 232.6 123 100.0
Nitab4.5_0000235g0150 Nicotiana tabacum HOM05D011531 ORTHO05D012843 3.9e-58 228.0 123 96.7
Nitab4.5_0000235g0160 Nicotiana tabacum HOM05D011531 ORTHO05D012843 1.6e-56 222.6 123 95.9
Nitab4.5_0000188g0010 Nicotiana tabacum HOM05D011531 ORTHO05D012843 4.6e-51 204.5 123 87.0
Nitab4.5_0018599g0010 Nicotiana tabacum HOM05D011531 ORTHO05D012843 6.6e-50 200.7 123 85.4
Nitab4.5_0003371g0010 Nicotiana tabacum HOM05D011531 ORTHO05D012843 1.6e-48 196.1 123 82.9
Nitab4.5_0001223g0060 Nicotiana tabacum HOM05D011531 ORTHO05D012843 1.1e-47 193.4 123 80.5
Nitab4.5_0009492g0030 Nicotiana tabacum HOM05D011531 ORTHO05D012843 8.2e-32 140.6 111 67.6
CAN.G424.67 Capsicum annuum HOM05D011531 ORTHO05D012843 1.0e-26 123.6 123 59.3
Sopen02g024380 Solanum pennellii HOM05D011531 ORTHO05D012843 8.5e-21 104.0 118 55.9
PGSC0003DMG400045733 Solanum tuberosum HOM05D011531 ORTHO05D012843 3.2e-20 102.1 118 55.9
PGSC0003DMG400013878 Solanum tuberosum HOM05D011531 ORTHO05D012843 2.1e-19 99.4 84 64.3
Nitab4.5_0009438g0030 Nicotiana tabacum HOM05D011531 ORTHO05D012843 7.9e-19 97.4 59 79.7
Oeu047064.1 Olea europaea HOM05D000519 ORTHO05D000959 7.7e-14 80.9 108 46.3
Peaxi162Scf00924g00023 Petunia axillaris HOM05D000519 ORTHO05D000959 7.7e-14 80.9 97 48.5
Peaxi162Scf00924g00035 Petunia axillaris HOM05D000519 ORTHO05D000959 1.0e-13 80.5 97 48.5
Peaxi162Scf00610g00115 Petunia axillaris HOM05D000519 ORTHO05D000959 1.3e-13 80.1 97 46.4
Nitab4.5_0001735g0110 Nicotiana tabacum HOM05D000519 ORTHO05D000959 2.2e-13 79.3 124 41.9
Peaxi162Scf00924g00031 Petunia axillaris HOM05D000519 ORTHO05D000959 2.2e-13 79.3 97 47.4
Peaxi162Scf00924g00032 Petunia axillaris HOM05D000519 ORTHO05D000959 2.2e-13 79.3 97 48.5
Nitab4.5_0004646g0100 Nicotiana tabacum HOM05D000519 ORTHO05D000959 2.9e-13 79.0 83 49.4
Peaxi162Scf00924g00034 Petunia axillaris HOM05D000519 ORTHO05D000959 2.9e-13 79.0 97 47.4
Nitab4.5_0001109g0080 Nicotiana tabacum HOM05D000519 ORTHO05D000959 5.0e-13 78.2 97 46.4
Nitab4.5_0005135g0030 Nicotiana tabacum HOM05D000519 ORTHO05D000959 7.2e-12 74.3 97 47.4
PGSC0003DMG400022338 Solanum tuberosum HOM05D011531 ORTHO05D012843 9.4e-12 73.9 64 57.8
Nitab4.5_0000143g0140 Nicotiana tabacum HOM05D000519 ORTHO05D016886 2.1e-11 72.8 140 37.9
Nitab4.5_0003626g0060 Nicotiana tabacum HOM05D015638 ORTHO05D016886 2.1e-11 72.8 138 36.2
Sopen10g033250 Solanum pennellii HOM05D011531 ORTHO05D393179 2.7e-11 72.4 122 35.2
Nitab4.5_0007568g0010 Nicotiana tabacum HOM05D015638 ORTHO05D016886 4.7e-11 71.6 138 37.0
Nitab4.5_0000132g0460 Nicotiana tabacum HOM05D011531 ORTHO05D000959 3.0e-10 68.9 109 40.4
Sopen11g007140 Solanum pennellii HOM05D000519 ORTHO05D000959 3.0e-10 68.9 112 39.3
CAN.G1263.20 Capsicum annuum HOM05D000519 ORTHO05D000959 5.1e-10 68.2 92 42.4
PGSC0003DMG402023603 Solanum tuberosum HOM05D000519 ORTHO05D000959 8.8e-10 67.4 99 41.4
CAN.G1186.46 Capsicum annuum HOM05D015638 ORTHO05D016886 1.1e-09 67.0 127 37.8
Solyc05g054120.1 Solanum lycopersicum HOM05D000519 ORTHO05D000959 1.1e-09 67.0 98 43.9
Oeu009405.1 Olea europaea HOM05D000519 ORTHO05D000959 2.0e-09 66.2 76 48.7
EL10Ac8g20214 Beta vulgaris HOM05D000519 ORTHO05D000959 5.7e-09 64.7 116 36.2
Solyc11g012385.1 Solanum lycopersicum HOM05D000519 ORTHO05D000959 5.7e-09 64.7 112 37.5
CSS0008277 Camellia sinensis var. sinensis HOM05D000519 ORTHO05D000959 7.4e-09 64.3 98 39.8
CSS0041609 Camellia sinensis var. sinensis HOM05D000519 ORTHO05D000959 7.4e-09 64.3 98 39.8
Solyc04g014790.1 Solanum lycopersicum HOM05D000519 ORTHO05D000959 9.7e-09 63.9 99 39.4
Sopen04g006920 Solanum pennellii HOM05D000519 ORTHO05D000959 9.7e-09 63.9 99 39.4
Medtr4g095630 Medicago truncatula HOM05D000519 ORTHO05D000959 1.3e-08 63.5 96 39.6
SalBow8G0429 Salvia bowleyana HOM05D000519 ORTHO05D000959 1.3e-08 63.5 102 41.2
PGSC0003DMG400008460 Solanum tuberosum HOM05D000519 ORTHO05D000959 1.7e-08 63.2 102 41.2
AT5G47550 Arabidopsis thaliana HOM05D000519 ORTHO05D000959 2.2e-08 62.8 124 36.3
CAN.G5949.1 Capsicum annuum HOM05D000519 ORTHO05D000959 2.2e-08 62.8 124 37.1
CAN.G696.24 Capsicum annuum HOM05D000519 ORTHO05D000959 2.8e-08 62.4 113 38.9
CAN.G696.25 Capsicum annuum HOM05D000519 ORTHO05D000959 2.8e-08 62.4 113 38.9
ClCG01G010520 Citrullus lanatus HOM05D000519 ORTHO05D000959 2.8e-08 62.4 97 33.0
THA.LOC104815487 Tarenaya hassleriana HOM05D000519 ORTHO05D000959 2.8e-08 62.4 61 52.5
TPR.G5977 Trifolium pratense HOM05D000519 ORTHO05D000959 2.8e-08 62.4 100 41.0
AT4G16500 Arabidopsis thaliana HOM05D000519 ORTHO05D000959 3.7e-08 62.0 76 40.8
ClCG01G010440 Citrullus lanatus HOM05D000519 ORTHO05D000959 3.7e-08 62.0 89 34.8
AL7G38460 Arabidopsis lyrata HOM05D000519 ORTHO05D000959 4.8e-08 61.6 99 34.3
ClCG01G010530 Citrullus lanatus HOM05D000519 ORTHO05D000959 4.8e-08 61.6 87 35.6
Prupe.4G008900 Prunus persica HOM05D000519 ORTHO05D000959 6.3e-08 61.2 92 43.5
SalBow8G3278 Salvia bowleyana HOM05D000519 ORTHO05D000959 6.3e-08 61.2 114 38.6
Sopen05g032610 Solanum pennellii HOM05D000519 ORTHO05D000959 6.3e-08 61.2 98 41.8
HPP92_014273 Vanilla planifolia HOM05D000519 ORTHO05D000959 6.3e-08 61.2 92 43.5
ClCG01G010470 Citrullus lanatus HOM05D000519 ORTHO05D000959 8.2e-08 60.8 97 33.0
Hma1.2p1_0657F.1_g197050 Hydrangea macrophylla HOM05D000519 ORTHO05D000959 8.2e-08 60.8 108 36.1
Migut.M01408 Erythranthe guttata HOM05D000519 ORTHO05D000959 1.1e-07 60.5 86 39.5
Sc17g0007820 Simmondsia chinensis HOM05D000519 ORTHO05D000959 1.1e-07 60.5 84 35.7
CiPaw.09G103500 Carya illinoinensis HOM05D000519 ORTHO05D000959 1.4e-07 60.1 107 37.4
Ciclev10009506m.g Citrus clementina HOM05D000519 ORTHO05D000959 1.4e-07 60.1 83 37.3
Oeu009403.1 Olea europaea HOM05D020212 ORTHO05D012843 1.4e-07 60.1 115 35.7
HPP92_014276 Vanilla planifolia HOM05D000519 ORTHO05D000959 1.4e-07 60.1 89 43.8
MELO3C025554.2 Cucumis melo HOM05D000519 ORTHO05D000959 1.8e-07 59.7 121 34.7
Thecc.06G234700 Theobroma cacao HOM05D000519 ORTHO05D000959 1.8e-07 59.7 87 40.2
TPR.G21872 Trifolium pratense HOM05D000519 ORTHO05D000959 1.8e-07 59.7 108 35.2
HPP92_024483 Vanilla planifolia HOM05D000519 ORTHO05D000959 1.8e-07 59.7 73 46.6
ClCG01G010490 Citrullus lanatus HOM05D000519 ORTHO05D000959 2.4e-07 59.3 97 34.0
Glyma.07G266000 Glycine max HOM05D000519 ORTHO05D000959 2.4e-07 59.3 83 41.0
THA.LOC104817839 Tarenaya hassleriana HOM05D000519 ORTHO05D000959 2.4e-07 59.3 61 52.5
TPR.G5936 Trifolium pratense HOM05D000919 ORTHO05D001187 2.4e-07 59.3 78 43.6
HPP92_024487 Vanilla planifolia HOM05D000519 ORTHO05D000959 2.4e-07 59.3 89 42.7
CAN.G1529.1 Capsicum annuum HOM05D000519 ORTHO05D000959 3.1e-07 58.9 99 38.4
Oeu009402.1 Olea europaea HOM05D020212 ORTHO05D012843 3.1e-07 58.9 115 35.7
Peaxi162Scf00610g00125 Petunia axillaris HOM05D000519 ORTHO05D000959 3.1e-07 58.9 70 47.1
Ah.09g234140 Amaranthus hybridus HOM05D000519 ORTHO05D000959 4.1e-07 58.5 91 35.2
MSTRG.7159 Avicennia marina HOM05D000519 ORTHO05D000959 4.1e-07 58.5 110 36.4
Carub.0007s2500 Capsella rubella HOM05D000519 ORTHO05D000959 4.1e-07 58.5 88 36.4
HanXRQChr17g0544761 Helianthus annuus HOM05D000519 ORTHO05D000959 4.1e-07 58.5 117 35.9
Lalb_Chr18g0057041 Lupinus albus HOM05D000519 ORTHO05D000959 4.1e-07 58.5 86 39.5
TAR629G0911 Trochodendron aralioides HOM05D000519 ORTHO05D000959 4.1e-07 58.5 96 40.6
Cfa000088 Carpinus fangiana HOM05D000519 ORTHO05D000959 5.3e-07 58.2 123 35.8
CsaV3_1G017120 Cucumis sativus L. HOM05D000519 ORTHO05D000959 5.3e-07 58.2 96 33.3
Dinv13973 Davidia involucrata HOM05D000519 ORTHO05D000959 5.3e-07 58.2 75 41.3
CSS0049006 Camellia sinensis var. sinensis HOM05D000519 ORTHO05D000959 7.0e-07 57.8 98 35.7
Lalb_Chr15g0088031 Lupinus albus HOM05D000519 ORTHO05D000959 7.0e-07 57.8 114 34.2
Nn5g27758 Nelumbo nucifera HOM05D000519 ORTHO05D000959 7.0e-07 57.8 92 37.0
A08p12510 Brassica napus HOM05D000519 ORTHO05D000959 9.1e-07 57.4 76 38.2
BraA08t33241Z Brassica rapa HOM05D000519 ORTHO05D000959 9.1e-07 57.4 76 38.2
Duzib192G0996 Durio zibethinus HOM05D000519 ORTHO05D000959 9.1e-07 57.4 120 35.8
Nn1g07421 Nelumbo nucifera HOM05D000519 ORTHO05D000959 9.1e-07 57.4 90 42.2
Nn5g27763 Nelumbo nucifera HOM05D000519 ORTHO05D000959 9.1e-07 57.4 111 34.2
Peaxi162Scf00924g00021 Petunia axillaris HOM05D000519 ORTHO05D000959 9.1e-07 57.4 92 42.4
PGSC0003DMG400047215 Solanum tuberosum HOM05D000519 ORTHO05D000959 9.1e-07 57.4 122 34.4
THA.LOC104821295 Tarenaya hassleriana HOM05D003002 ORTHO05D000959 9.1e-07 57.4 80 40.0
BcaC07g37991 Brassica carinata HOM05D000519 ORTHO05D000959 1.2e-06 57.0 76 38.2
BolC8t48374H Brassica oleracea HOM05D000519 ORTHO05D000959 1.2e-06 57.0 76 38.2
CAN.G370.1 Capsicum annuum HOM05D000519 ORTHO05D000959 1.2e-06 57.0 123 31.7
Nn5g27762 Nelumbo nucifera HOM05D000519 ORTHO05D000959 1.2e-06 57.0 113 32.7
Psat4g004160 Pisum sativum HOM05D000519 ORTHO05D000959 1.2e-06 57.0 76 39.5
Potri.006G014500 Populus trichocarpa HOM05D000519 ORTHO05D000959 1.2e-06 57.0 111 36.9
TPR.G35340 Trifolium pratense HOM05D000519 ORTHO05D000959 1.2e-06 57.0 68 44.1
Ca_00730_v3 Cicer arietinum L. HOM05D000519 ORTHO05D000959 1.5e-06 56.6 112 35.7
DCAR_002225 Daucus carota HOM05D000519 ORTHO05D000959 1.5e-06 56.6 94 38.3
Medtr2g026040 Medicago truncatula HOM05D000519 ORTHO05D000959 1.5e-06 56.6 86 40.7
Medtr8g079410 Medicago truncatula HOM05D000519 ORTHO05D000959 1.5e-06 56.6 85 36.5
AUR62012808 Chenopodium quinoa HOM05D000519 ORTHO05D000959 2.0e-06 56.2 91 39.6
Lj6g0022755 Lotus japonicus HOM05D000519 ORTHO05D000959 2.0e-06 56.2 80 40.0
HanXRQChr17g0559581 Helianthus annuus HOM05D000519 ORTHO05D000959 2.6e-06 55.8 89 37.1
PGR042G1719 Punica granatum HOM05D000519 ORTHO05D000959 2.6e-06 55.8 61 47.5
Sopen04g006910 Solanum pennellii HOM05D000519 ORTHO05D000959 2.6e-06 55.8 122 32.8
Sopen11g007130 Solanum pennellii HOM05D015638 ORTHO05D016886 2.6e-06 55.8 131 35.1
SGA_v2.0_scaffold4G01865 Striga asiatica HOM05D000919 ORTHO05D001187 2.6e-06 55.8 89 38.2
TPR.G33246 Trifolium pratense HOM05D000519 ORTHO05D000959 2.6e-06 55.8 68 41.2
arahy.Tifrunner.gnm1.ann1.QX2NVJ Arachis hypogaea HOM05D000519 ORTHO05D000959 3.4e-06 55.5 96 37.5
TPR.G21870 Trifolium pratense HOM05D000519 ORTHO05D000959 3.4e-06 55.5 68 42.6
Ah.08g216340 Amaranthus hybridus HOM05D000519 ORTHO05D000959 4.5e-06 55.1 83 41.0
CAN.G1263.17 Capsicum annuum HOM05D000519 ORTHO05D000959 4.5e-06 55.1 113 36.3
CAN.G1263.18 Capsicum annuum HOM05D000519 ORTHO05D000959 4.5e-06 55.1 85 40.0
CAN.G64.23 Capsicum annuum HOM05D000519 ORTHO05D000959 4.5e-06 55.1 125 36.0
FvH4_3g00830 Fragaria vesca HOM05D000519 ORTHO05D000959 4.5e-06 55.1 86 39.5
Gohir.A06G154100 Gossypium hirsutum HOM05D000519 ORTHO05D000959 4.5e-06 55.1 67 41.8
Gohir.D06G160700 Gossypium hirsutum HOM05D000519 ORTHO05D000959 4.5e-06 55.1 101 33.7
Solyc04g014780.1 Solanum lycopersicum HOM05D000519 ORTHO05D000959 4.5e-06 55.1 122 35.2
TPR.G35897 Trifolium pratense HOM05D000519 ORTHO05D000959 4.5e-06 55.1 85 41.2
CsaV3_1G017110 Cucumis sativus L. HOM05D000519 ORTHO05D000959 5.9e-06 54.7 76 36.8
Nn3g21162 Nelumbo nucifera HOM05D000519 ORTHO05D000959 5.9e-06 54.7 107 38.3
Peaxi162Scf00352g00051 Petunia axillaris HOM05D015638 ORTHO05D016886 5.9e-06 54.7 102 39.2
TPR.G945 Trifolium pratense HOM05D000519 ORTHO05D000959 5.9e-06 54.7 87 42.5
AL8G10420 Arabidopsis lyrata HOM05D000519 ORTHO05D000959 7.7e-06 54.3 117 33.3
BcaNung00185 Brassica carinata HOM05D000519 ORTHO05D000959 7.7e-06 54.3 88 35.2
Migut.I00372 Erythranthe guttata HOM05D000519 ORTHO05D000959 7.7e-06 54.3 62 46.8
Thecc.03G313400 Theobroma cacao HOM05D000519 ORTHO05D000959 7.7e-06 54.3 90 36.7


User provided reference genes

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