Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004433g0030 Nicotiana tabacum HOM05D007752 ORTHO05D009994 1.3e-131 474.2 520 100.0
Peaxi162Scf00732g00031 Petunia axillaris HOM05D007752 ORTHO05D000248 4.8e-41 173.3 372 83.1
Peaxi162Scf00141g00093 Petunia axillaris HOM05D007752 ORTHO05D009994 3.4e-39 167.2 352 83.5
Solyc09g042250.2 Solanum lycopersicum HOM05D007752 ORTHO05D009994 6.5e-38 162.9 490 73.9
Sopen09g015390 Solanum pennellii HOM05D007752 ORTHO05D009994 1.2e-36 158.7 490 75.5
PGSC0003DMG400038126 Solanum tuberosum HOM05D007752 ORTHO05D009994 2.8e-25 120.9 72 80.6
CSS0006720 Camellia sinensis var. sinensis HOM05D007752 ORTHO05D009994 1.0e-19 102.4 379 64.6
Oeu057981.1 Olea europaea HOM05D007752 ORTHO05D009994 1.2e-18 99.0 381 70.1
Migut.J00038 Erythranthe guttata HOM05D007752 ORTHO05D009994 2.6e-18 97.8 426 66.7
Lj3P941T40 Lonicera japonica HOM05D007752 ORTHO05D009994 1.3e-17 95.5 139 40.3
SGA_v2.0_scaffold85G26614 Striga asiatica HOM05D007752 ORTHO05D009994 2.8e-17 94.4 139 38.8
HanXRQChr01g0000111 Helianthus annuus HOM05D007752 ORTHO05D009994 3.1e-16 90.9 72 59.7
RcHm_v2.0_Chr3g0460471 Rosa chinensis HOM05D007752 ORTHO05D009994 3.1e-16 90.9 102 46.1
Hma1.2p1_0174F.1_g076820 Hydrangea macrophylla HOM05D007752 ORTHO05D009994 5.3e-16 90.1 363 75.2
Lsat_1_v5_gn_5_152320 Lactuca sativa HOM05D007752 ORTHO05D009994 7.0e-16 89.7 72 56.9
FAN14G1029 Fragaria x ananassa HOM05D007752 ORTHO05D009994 1.2e-15 89.0 102 45.1
FvH4_6g09870 Fragaria vesca HOM05D007752 ORTHO05D009994 1.6e-15 88.6 102 44.1
FAN02G1651 Fragaria x ananassa HOM05D007752 ORTHO05D009994 1.6e-15 88.6 102 43.1
FAN09G1066 Fragaria x ananassa HOM05D007752 ORTHO05D009994 1.3e-14 85.5 102 42.2
CSS0000350 Camellia sinensis var. sinensis HOM05D007752 ORTHO05D009994 1.7e-14 85.1 72 52.8
COL.COLO4_06481 Corchorus olitorius HOM05D007752 ORTHO05D000248 1.7e-14 85.1 134 41.8
QL07p032115 Quercus lobata HOM05D007752 ORTHO05D009994 2.2e-14 84.7 137 33.6
Rhsim04G0121800 Rhododendron simsii HOM05D007752 ORTHO05D009994 2.2e-14 84.7 114 43.9
CiPaw.10G164800 Carya illinoinensis HOM05D007752 ORTHO05D009994 5.0e-14 83.6 138 55.1
Dinv16979 Davidia involucrata HOM05D007752 ORTHO05D009994 8.5e-14 82.8 150 38.7
Potri.016G136700 Populus trichocarpa HOM05D007752 ORTHO05D009994 1.9e-13 81.6 120 42.5
MD04G1174700 Malus domestica HOM05D007752 ORTHO05D009994 5.5e-13 80.1 138 63.0
TWI77G0759 Tripterygium wilfordii HOM05D007752 ORTHO05D009994 7.2e-13 79.7 72 54.2
Ciclev10013314m.g Citrus clementina HOM05D007752 ORTHO05D009994 4.7e-12 77.0 138 31.9
Actinidia29032 Actinidia chinensis HOM05D007752 ORTHO05D009994 6.1e-12 76.6 72 48.6
Haze_21175 Corylus avellana HOM05D007752 ORTHO05D009994 6.1e-12 76.6 137 32.1
Cfa017034 Carpinus fangiana HOM05D007752 ORTHO05D009994 8.0e-12 76.3 137 35.0
SalBow1G2062 Salvia bowleyana HOM05D007752 ORTHO05D009994 1.8e-11 75.1 148 33.8
SalBow1G4712 Salvia bowleyana HOM05D007752 ORTHO05D009994 1.8e-11 75.1 148 33.8
Prupe.6G293600 Prunus persica HOM05D007752 ORTHO05D009994 2.3e-11 74.7 99 41.4
Sabra04G0153400 Salix brachista HOM05D007752 ORTHO05D009994 5.2e-11 73.6 132 36.4
ClCG10G022730 Citrullus lanatus HOM05D007752 ORTHO05D009994 1.2e-10 72.4 67 50.7
Duzib151G0981 Durio zibethinus HOM05D007752 ORTHO05D009994 1.2e-10 72.4 163 35.6
Psat3g118880 Pisum sativum HOM05D007752 ORTHO05D009994 2.6e-10 71.2 172 34.3
Thecc.04G151600 Theobroma cacao HOM05D007752 ORTHO05D009994 2.6e-10 71.2 129 38.0
CANSAT35G0798 Cannabis sativa HOM05D007752 ORTHO05D009994 4.4e-10 70.5 107 38.3
SalBow5G4979 Salvia bowleyana HOM05D007752 ORTHO05D009994 5.7e-10 70.1 154 35.1
SalBow8G2716 Salvia bowleyana HOM05D007752 ORTHO05D009994 5.7e-10 70.1 137 33.6
Ah.08g209310 Amaranthus hybridus HOM05D007752 ORTHO05D009994 7.5e-10 69.7 72 45.8
TPR.G14113 Trifolium pratense HOM05D007752 ORTHO05D009994 9.8e-10 69.3 159 31.4
TAR633G0335 Trochodendron aralioides HOM05D007752 ORTHO05D009994 1.3e-09 68.9 137 30.7
Aqoxy4G02425 Aquilegia oxysepala HOM05D007752 ORTHO05D009994 2.2e-09 68.2 79 43.0
ECA248G3142 Erigeron canadensis HOM05D007752 ORTHO05D009994 2.8e-09 67.8 72 43.1
Glyma.09G274800 Glycine max HOM05D007752 ORTHO05D009994 2.8e-09 67.8 66 47.0
Lj1g0026088 Lotus japonicus HOM05D007752 ORTHO05D009994 4.8e-09 67.0 97 36.1
Phvul.008G082800 Phaseolus vulgaris HOM05D007752 ORTHO05D009994 6.3e-09 66.6 122 32.0
VMungo1383G3403 Vigna mungo HOM05D007752 ORTHO05D009994 8.3e-09 66.2 154 28.6
Gohir.D02G003700 Gossypium hirsutum HOM05D007752 ORTHO05D009994 1.1e-08 65.9 72 37.5
Gorai.005G004200 Gossypium raimondii HOM05D007752 ORTHO05D009994 1.1e-08 65.9 72 37.5
PSO170G5102 Papaver somniferum HOM05D007752 ORTHO05D009994 1.1e-08 65.9 138 29.7
Ca_07763_v3 Cicer arietinum L. HOM05D007752 ORTHO05D009994 1.4e-08 65.5 71 45.1
Medtr7g073260 Medicago truncatula HOM05D007752 ORTHO05D009994 1.4e-08 65.5 162 32.1
Gohir.A02G003300 Gossypium hirsutum HOM05D007752 ORTHO05D009994 2.4e-08 64.7 71 38.0
EL10Ac7g17101 Beta vulgaris HOM05D007752 ORTHO05D000248 3.1e-08 64.3 140 57.1
Sed0005875 Sechium edule HOM05D007752 ORTHO05D009994 3.1e-08 64.3 67 44.8
Cpa.g.sc86.57 Carica papaya HOM05D007752 ORTHO05D009994 5.4e-08 63.5 72 40.3
MBI03_g22789_MAGBIO Magnolia biondii HOM05D007752 ORTHO05D009994 5.4e-08 63.5 95 38.9
PSO017G1004 Papaver somniferum HOM05D007752 ORTHO05D009994 5.4e-08 63.5 138 29.7
PGR031G1793 Punica granatum HOM05D007752 ORTHO05D009994 9.1e-08 62.8 83 44.6
AUR62006417 Chenopodium quinoa HOM05D007752 ORTHO05D000248 2.0e-07 61.6 90 38.9
AUR62029765 Chenopodium quinoa HOM05D007752 ORTHO05D009994 2.0e-07 61.6 95 38.9
MELO3C009103.2 Cucumis melo HOM05D007752 ORTHO05D009994 3.5e-07 60.8 63 42.9
Sc20g0006950 Simmondsia chinensis HOM05D007752 ORTHO05D009994 7.7e-07 59.7 72 37.5
Sc20g0006960 Simmondsia chinensis HOM05D007752 ORTHO05D009994 1.7e-06 58.5 69 42.0
Eucgr.A00738 Eucalyptus grandis HOM05D007752 ORTHO05D009994 2.9e-06 57.8 138 26.1
Nn2g10299 Nelumbo nucifera HOM05D007752 ORTHO05D009994 3.8e-06 57.4 84 40.5


User provided reference genes

Program Settings