Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004423g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.4e-44 182.6 89 100.0
Nitab4.5_0027927g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.5e-24 114.8 87 66.7
Nitab4.5_0000355g0120 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.8e-20 102.4 84 63.1
Nitab4.5_0003729g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.4e-19 97.8 98 52.0
Nitab4.5_0009493g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.7e-19 97.4 76 63.2
Nitab4.5_0002828g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.3e-18 94.0 76 60.5
Nitab4.5_0009728g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.3e-18 93.6 85 57.6
Nitab4.5_0002177g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.0e-17 90.5 76 56.6
Nitab4.5_0006350g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.0e-15 86.7 83 51.8
Nitab4.5_0007212g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.0e-15 86.7 80 51.2
Nitab4.5_0003255g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.7e-15 85.9 83 54.2
Nitab4.5_0000721g0270 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.3e-15 85.5 83 48.2
Nitab4.5_0000022g0370 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.9e-15 85.1 74 54.1
Nitab4.5_0002053g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.9e-15 85.1 83 50.6
Nitab4.5_0009190g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.9e-15 85.1 98 45.9
Nitab4.5_0002249g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.0e-15 84.3 83 49.4
Nitab4.5_0005246g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.6e-15 83.6 74 58.1
Nitab4.5_0000654g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.1e-14 83.2 83 48.2
Nitab4.5_0000026g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.5e-14 82.8 83 51.8
Nitab4.5_0001287g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.5e-14 82.8 78 53.8
Nitab4.5_0001264g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.9e-14 82.4 82 48.8
Nitab4.5_0000386g0220 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.5e-14 80.9 86 50.0
Nitab4.5_0001569g0180 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.5e-14 80.9 71 54.9
Nitab4.5_0008830g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.2e-14 80.5 68 58.8
Nitab4.5_0000099g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.5e-14 80.1 80 46.2
Nitab4.5_0002061g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.5e-14 80.1 86 46.5
Nitab4.5_0000109g0440 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.2e-13 79.7 74 54.1
Nitab4.5_0000422g0130 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.2e-13 79.7 76 56.6
Nitab4.5_0007986g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.1e-13 79.0 83 45.8
Nitab4.5_0007752g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.6e-13 78.2 91 46.2
Nitab4.5_0000429g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.7e-13 77.8 85 48.2
Nitab4.5_0001783g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.1e-13 77.4 80 46.2
Nitab4.5_0000013g0580 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.0e-13 77.0 75 52.0
Nitab4.5_0004489g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.0e-13 77.0 80 46.2
Nitab4.5_0000370g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.0e-12 76.6 86 43.0
Nitab4.5_0002004g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.0e-12 76.6 80 46.2
Nitab4.5_0005100g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.0e-12 76.6 71 54.9
Nitab4.5_0007963g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.0e-12 76.6 86 51.2
Nitab4.5_0007825g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.0e-12 75.1 77 48.1
Nitab4.5_0004401g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.0e-12 74.7 83 41.0
Nitab4.5_0000329g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.9e-12 73.6 89 43.8
Nitab4.5_0002170g0130 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.9e-12 73.6 84 44.0
Nitab4.5_0001286g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.2e-11 73.2 83 45.8
Nitab4.5_0001307g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.2e-11 73.2 83 44.6
Nitab4.5_0001987g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.2e-11 73.2 83 45.8
Nitab4.5_0002416g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.2e-11 73.2 88 42.0
Nitab4.5_0000031g0310 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.5e-11 72.8 65 56.9
Nitab4.5_0001544g0120 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.5e-11 72.8 89 40.4
Nitab4.5_0000044g0290 Nicotiana tabacum HOM05D000024 ORTHO05D000006 2.6e-11 72.0 81 45.7
Nitab4.5_0000164g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.6e-11 72.0 83 44.6
Nitab4.5_0000002g0530 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.4e-11 71.2 83 45.8
Nitab4.5_0001375g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.4e-11 71.2 87 44.8
Nitab4.5_0003374g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.4e-11 71.2 93 40.9
Nitab4.5_0003397g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.4e-11 71.2 83 43.4
Nitab4.5_0004118g0150 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.4e-11 71.2 101 37.6
Nitab4.5_0008161g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.4e-11 71.2 79 44.3
Nitab4.5_0000008g0530 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.5e-11 70.5 74 47.3
Nitab4.5_0000087g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.8e-11 70.1 83 38.6
Nitab4.5_0003516g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.8e-11 70.1 83 42.2
Nitab4.5_0000032g0500 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.3e-10 69.7 68 50.0
Nitab4.5_0000061g0360 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.3e-10 69.7 83 48.2
Nitab4.5_0015178g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.3e-10 69.7 76 47.4
Nitab4.5_0003236g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.7e-10 69.3 83 43.4
Peaxi162Scf00460g00041 Petunia axillaris HOM05D000024 ORTHO05D000007 1.7e-10 69.3 82 43.9
Nitab4.5_0000063g0330 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.2e-10 68.9 83 45.8
Nitab4.5_0001907g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.2e-10 68.9 83 42.2
Nitab4.5_0002909g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.2e-10 68.9 84 44.0
Nitab4.5_0003810g0050 Nicotiana tabacum HOM05D011951 ORTHO05D000007 2.2e-10 68.9 70 48.6
Nitab4.5_0005065g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.2e-10 68.9 83 43.4
Nitab4.5_0008745g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.2e-10 68.9 83 42.2
Nitab4.5_0000098g0120 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.8e-10 68.6 98 39.8
Nitab4.5_0000173g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.8e-10 68.6 83 45.8
Nitab4.5_0002289g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.8e-10 68.6 98 37.8
Nitab4.5_0003185g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.7e-10 68.2 83 41.0
Nitab4.5_0004658g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.7e-10 68.2 83 42.2
CAN.G1139.21 Capsicum annuum HOM05D000024 ORTHO05D000007 4.9e-10 67.8 83 44.6
Nitab4.5_0000102g0370 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.9e-10 67.8 83 42.2
Nitab4.5_0000274g0290 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.9e-10 67.8 80 43.8
Nitab4.5_0000961g0150 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.9e-10 67.8 82 41.5
Nitab4.5_0002966g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.9e-10 67.8 92 38.0
Nitab4.5_0003500g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.9e-10 67.8 83 42.2
Nitab4.5_0005517g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.3e-10 67.4 70 42.9
Nitab4.5_0000023g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.3e-10 67.0 76 40.8
Nitab4.5_0000092g0340 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.1e-09 66.6 80 41.2
Nitab4.5_0008738g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.1e-09 66.6 91 40.7
Peaxi162Scf00118g00217 Petunia axillaris HOM05D000024 ORTHO05D000007 1.1e-09 66.6 66 50.0
Solyc09g059390.2 Solanum lycopersicum HOM05D000024 ORTHO05D000007 1.1e-09 66.6 69 46.4
Nitab4.5_0001580g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.4e-09 66.2 83 47.0
Nitab4.5_0003178g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.4e-09 66.2 94 43.6
Nitab4.5_0000028g0160 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.4e-09 65.5 83 41.0
Nitab4.5_0000068g0350 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.4e-09 65.5 83 38.6
Nitab4.5_0000465g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.4e-09 65.5 83 42.2
Nitab4.5_0000481g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.4e-09 65.5 76 43.4
Nitab4.5_0000847g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.4e-09 65.5 74 45.9
Nitab4.5_0006168g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.4e-09 65.5 71 42.3
Nitab4.5_0009312g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.4e-09 65.5 98 39.8
Nitab4.5_0002284g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.1e-09 65.1 83 36.1
Nitab4.5_0000188g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.0e-09 63.9 83 41.0
Nitab4.5_0000677g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.2e-09 63.5 83 36.1
Nitab4.5_0002591g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.2e-09 63.5 76 42.1
Nitab4.5_0007267g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.2e-09 63.5 62 46.8
Nitab4.5_0000103g0250 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.2e-08 63.2 70 47.1
Nitab4.5_0001130g0240 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.2e-08 63.2 93 35.5
Nitab4.5_0000715g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.6e-08 62.8 84 40.5
Nitab4.5_0002977g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.0e-08 62.4 68 44.1
Nitab4.5_0016046g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.0e-08 62.4 76 43.4
Nitab4.5_0000459g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.7e-08 62.0 67 40.3
Nitab4.5_0002414g0080 Nicotiana tabacum HOM05D011951 ORTHO05D000007 2.7e-08 62.0 80 43.8
Nitab4.5_0002590g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.7e-08 62.0 83 42.2
Nitab4.5_0005500g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.7e-08 62.0 75 41.3
Nitab4.5_0003921g0010 Nicotiana tabacum HOM05D014359 ORTHO05D000007 3.5e-08 61.6 71 42.3
Nitab4.5_0005560g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.5e-08 61.6 84 39.3
Nitab4.5_0000818g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.5e-08 61.2 55 61.8
Nitab4.5_0001757g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.5e-08 61.2 83 44.6
Nitab4.5_0003605g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.5e-08 61.2 80 40.0
Nitab4.5_0013531g0010 Nicotiana tabacum HOM05D014359 ORTHO05D000007 4.5e-08 61.2 71 42.3
Nitab4.5_0015860g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000006 4.5e-08 61.2 71 42.3
Nitab4.5_0000082g0240 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.9e-08 60.8 78 41.0
Nitab4.5_0000575g0280 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.9e-08 60.8 93 37.6
Nitab4.5_0006025g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.9e-08 60.8 96 34.4
CAN.G529.35 Capsicum annuum HOM05D000024 ORTHO05D000007 7.8e-08 60.5 71 43.7
Nitab4.5_0002956g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.8e-08 60.5 68 45.6
Nitab4.5_0001760g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.3e-07 59.7 65 44.6
Nitab4.5_0009838g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.3e-07 59.7 68 47.1
Nitab4.5_0000244g0210 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.7e-07 59.3 76 46.1
Nitab4.5_0001660g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.7e-07 59.3 73 39.7
Nitab4.5_0001676g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.7e-07 59.3 77 42.9
Nitab4.5_0000175g0220 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.3e-07 58.9 93 34.4
Nitab4.5_0005584g0050 Nicotiana tabacum HOM05D000077 ORTHO05D000339 2.3e-07 58.9 56 60.7
Nitab4.5_0007582g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.3e-07 58.9 85 41.2
Nitab4.5_0000149g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.9e-07 58.5 89 41.6
Nitab4.5_0000270g0220 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.9e-07 58.5 54 50.0
Nitab4.5_0000417g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.9e-07 58.5 108 34.3
Nitab4.5_0003807g0050 Nicotiana tabacum HOM05D016244 ORTHO05D000007 3.9e-07 58.2 73 39.7
Nitab4.5_0009471g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.9e-07 58.2 83 41.0
Nitab4.5_0002157g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.6e-07 57.4 76 42.1
Nitab4.5_0004621g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.6e-07 57.4 71 40.8
Nitab4.5_0002171g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.6e-07 57.0 68 45.6
Nitab4.5_0002880g0060 Nicotiana tabacum HOM05D011002 ORTHO05D000007 8.6e-07 57.0 68 42.6
Nitab4.5_0003347g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.5e-06 56.2 104 38.5
Sopen02g009750 Solanum pennellii HOM05D000003 ORTHO05D026164 1.5e-06 56.2 70 37.1
PGSC0003DMG400034636 Solanum tuberosum HOM05D000024 ORTHO05D000007 1.5e-06 56.2 99 34.3
CAN.G529.7 Capsicum annuum HOM05D000024 ORTHO05D000007 1.9e-06 55.8 68 39.7
Nitab4.5_0005284g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.9e-06 55.8 83 36.1
PGSC0003DMG400034828 Solanum tuberosum HOM05D000155 ORTHO05D000022 1.9e-06 55.8 83 34.9
Nitab4.5_0001585g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.5e-06 55.5 69 42.0
Nitab4.5_0001360g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.3e-06 55.1 65 38.5
Nitab4.5_0003071g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.3e-06 54.7 40 70.0
Nitab4.5_0011088g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.6e-06 54.3 82 39.0
Peaxi162Scf00773g00120 Petunia axillaris HOM05D000024 ORTHO05D000007 5.6e-06 54.3 66 39.4
SHI33735 Sapria himalayana HOM05D000024 ORTHO05D000007 5.6e-06 54.3 66 47.0
Nitab4.5_0000023g0230 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.3e-06 53.9 41 68.3
PGSC0003DMG400036761 Solanum tuberosum HOM05D000024 ORTHO05D000007 7.3e-06 53.9 71 39.4
PGSC0003DMG400042385 Solanum tuberosum HOM05D000024 ORTHO05D000007 7.3e-06 53.9 70 32.9
Nitab4.5_0001423g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.5e-06 53.5 83 39.8
Nitab4.5_0002737g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.5e-06 53.5 69 43.5
Nitab4.5_0009562g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.5e-06 53.5 31 74.2


User provided reference genes

Program Settings