Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004398g0020 Nicotiana tabacum HOM05D008372 ORTHO05D010559 4.9e-185 651.0 326 100.0
PGSC0003DMG400024192 Solanum tuberosum HOM05D008372 ORTHO05D010559 5.1e-158 561.2 329 86.0
Sopen02g014250 Solanum pennellii HOM05D008372 ORTHO05D010559 1.6e-156 556.2 330 85.5
CAN.G225.5 Capsicum annuum HOM05D008372 ORTHO05D010559 2.3e-150 535.8 327 82.3
Nitab4.5_0001217g0010 Nicotiana tabacum HOM05D008372 ORTHO05D010559 8.5e-145 517.3 309 86.4
Dinv34822 Davidia involucrata HOM05D008372 ORTHO05D010559 4.8e-124 448.4 303 71.6
Prupe.8G147100 Prunus persica HOM05D008372 ORTHO05D010559 8.6e-121 437.6 304 69.7
CSS0004693 Camellia sinensis var. sinensis HOM05D008372 ORTHO05D010559 2.1e-119 433.0 320 66.6
CSS0035068 Camellia sinensis var. sinensis HOM05D008372 ORTHO05D010559 3.6e-119 432.2 320 66.6
COL.COLO4_09329 Corchorus olitorius HOM05D008372 ORTHO05D010559 5.2e-118 428.3 322 66.8
QL02p051398 Quercus lobata HOM05D008372 ORTHO05D010559 5.7e-117 424.9 308 66.9
Thecc.04G133800 Theobroma cacao HOM05D008372 ORTHO05D010559 2.8e-116 422.5 301 68.8
Ciclev10013657m.g Citrus clementina HOM05D008372 ORTHO05D010559 1.4e-115 420.2 310 66.5
SGA_v2.0_scaffold329G48876 Striga asiatica HOM05D008372 ORTHO05D010559 1.6e-114 416.8 285 69.8
Actinidia36321 Actinidia chinensis HOM05D008372 ORTHO05D010559 3.5e-114 415.6 315 63.2
Rhsim10G0067200 Rhododendron simsii HOM05D008372 ORTHO05D010559 1.0e-113 414.1 289 68.9
Gorai.001G202000 Gossypium raimondii HOM05D008372 ORTHO05D010559 1.3e-113 413.7 324 63.9
Gohir.A07G173100 Gossypium hirsutum HOM05D008372 ORTHO05D010559 2.9e-113 412.5 324 63.9
Gohir.D07G181100 Gossypium hirsutum HOM05D008372 ORTHO05D010559 5.0e-113 411.8 324 63.3
Aqoxy3G00272 Aquilegia oxysepala HOM05D008372 ORTHO05D010559 1.5e-112 410.2 311 65.9
GSVIVG01031022001 Vitis vinifera HOM05D008372 ORTHO05D010559 4.3e-112 408.7 289 68.2
CANSAT78G1639 Cannabis sativa HOM05D008372 ORTHO05D010559 2.8e-111 406.0 294 65.3
Cpa.g.sc282.9 Carica papaya HOM05D008372 ORTHO05D010559 4.9e-108 395.2 270 70.0
TAR629G0699 Trochodendron aralioides HOM05D008372 ORTHO05D010559 1.6e-106 390.2 324 61.1
PSO384G0617 Papaver somniferum HOM05D008372 ORTHO05D010559 2.7e-106 389.4 301 61.5
Haze_14152 Corylus avellana HOM05D008372 ORTHO05D010559 2.5e-104 382.9 312 61.9
PSO339G4146 Papaver somniferum HOM05D008372 ORTHO05D010559 9.5e-104 380.9 306 60.1
Atru.chr1.1698 Acer truncatum HOM05D008372 ORTHO05D010559 1.5e-101 373.6 269 66.5
PGR004G0240 Punica granatum HOM05D008372 ORTHO05D010559 1.8e-94 350.1 316 58.5
Nn4g23872 Nelumbo nucifera HOM05D008372 ORTHO05D010559 1.3e-92 344.0 260 65.4
AagrBONN_evm.TU.Sc2ySwM_117.1277 Anthoceros agrestis HOM05D008372 ORTHO05D010559 4.1e-91 339.0 284 56.7
Cfa007923 Carpinus fangiana HOM05D006225 ORTHO05D010559 9.2e-91 337.8 241 68.5
CANSAT78G1437 Cannabis sativa HOM05D008372 ORTHO05D010559 6.6e-89 331.6 242 66.1
Pp3c9_18240 Physcomitrium patens HOM05D008372 ORTHO05D010559 1.1e-88 330.9 281 58.7
HPP92_024422 Vanilla planifolia HOM05D008372 ORTHO05D010559 5.2e-86 322.0 287 57.1
SMO356G0307 Selaginella moellendorffii HOM05D008372 ORTHO05D010559 2.6e-85 319.7 308 53.2
Mapoly0081s0037 Marchantia polymorpha HOM05D008372 ORTHO05D010559 9.2e-83 311.2 290 53.4
CBR_g23242 Chara braunii HOM05D008372 ORTHO05D010559 2.1e-82 310.1 284 53.2
Nn8g38834 Nelumbo nucifera HOM05D008372 ORTHO05D010559 1.3e-73 280.8 224 62.9
Solyc02g063190.2 Solanum lycopersicum HOM05D008372 ORTHO05D010559 3.6e-71 272.7 167 81.4
Nn1g03461 Nelumbo nucifera HOM05D008372 ORTHO05D010559 6.9e-70 268.5 212 63.7
Solyc02g063180.4 Solanum lycopersicum HOM05D008372 ORTHO05D010559 7.9e-66 255.0 142 90.8
Peaxi162Scf00501g00319 Petunia axillaris HOM05D008372 ORTHO05D010559 5.6e-64 248.8 142 88.0
Peaxi162Scf00501g00324 Petunia axillaris HOM05D008372 ORTHO05D010559 7.4e-64 248.4 165 77.0
Migut.L00318 Erythranthe guttata HOM05D008372 ORTHO05D010559 5.8e-61 238.8 179 64.2
PRCOL_00000444 Prasinoderma coloniale HOM05D008372 ORTHO05D010559 3.7e-55 219.5 254 48.0
Cc07_g08820 Coffea canephora HOM05D008372 ORTHO05D010559 5.8e-53 212.2 184 59.8
SEGI_35369 Sequoiadendron giganteum HOM05D008372 ORTHO05D010559 4.1e-46 189.5 166 57.2
Oeu008425.1 Olea europaea HOM05D008372 ORTHO05D010559 1.5e-40 171.0 147 61.2
Nn1g03560 Nelumbo nucifera HOM05D008372 ORTHO05D010559 9.1e-38 161.8 205 46.8
Nn4g22381 Nelumbo nucifera HOM05D008372 ORTHO05D010559 7.9e-34 148.7 137 56.9
RcHm_v2.0_Chr6g0252551 Rosa chinensis HOM05D008372 ORTHO05D010559 2.4e-30 137.1 81 74.1
Nn7g36676 Nelumbo nucifera HOM05D008372 ORTHO05D010559 2.6e-29 133.7 130 56.9
Actinidia15884 Actinidia chinensis HOM05D008372 ORTHO05D010559 1.9e-27 127.5 122 54.1
Potri.004G099466 Populus trichocarpa HOM05D008372 ORTHO05D010559 1.2e-26 124.8 100 60.0
vmacro05555 Vaccinium macrocarpon HOM05D006225 ORTHO05D007676 4.8e-15 86.3 162 37.0
Potri.017G115002 Populus trichocarpa HOM05D008372 ORTHO05D010559 2.2e-07 60.8 62 59.7


User provided reference genes

Program Settings