Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004380g0010 Nicotiana tabacum HOM05D008559 ORTHO05D011161 3.3e-119 431.8 229 100.0
Nitab4.5_0000030g0030 Nicotiana tabacum HOM05D008559 ORTHO05D011161 2.3e-32 143.3 140 61.4
Nitab4.5_0000945g0060 Nicotiana tabacum HOM05D008559 ORTHO05D284281 1.3e-30 137.5 220 45.5
Nitab4.5_0000315g0130 Nicotiana tabacum HOM05D008559 ORTHO05D011161 3.7e-30 136.0 141 56.7
Nitab4.5_0013856g0010 Nicotiana tabacum HOM05D008559 ORTHO05D011161 1.4e-29 134.0 209 41.6
Nitab4.5_0004542g0010 Nicotiana tabacum HOM05D008559 ORTHO05D011161 2.3e-27 126.7 153 49.7
Nitab4.5_0000163g0050 Nicotiana tabacum HOM05D008559 ORTHO05D011161 1.8e-24 117.1 212 39.6
Nitab4.5_0000311g0110 Nicotiana tabacum HOM05D008559 ORTHO05D011161 4.0e-24 115.9 148 48.6
Nitab4.5_0004792g0020 Nicotiana tabacum HOM05D008559 ORTHO05D011161 5.2e-24 115.5 178 44.4
Nitab4.5_0000700g0040 Nicotiana tabacum HOM05D008559 ORTHO05D011161 1.2e-23 114.4 113 55.8
Nitab4.5_0006309g0050 Nicotiana tabacum HOM05D008559 ORTHO05D011161 2.9e-22 109.8 146 48.6
Nitab4.5_0001016g0050 Nicotiana tabacum HOM05D008559 ORTHO05D011161 6.4e-22 108.6 145 47.6
Nitab4.5_0004318g0020 Nicotiana tabacum HOM05D008559 ORTHO05D011161 1.9e-21 107.1 187 41.7
Nitab4.5_0002031g0130 Nicotiana tabacum HOM05D008559 ORTHO05D011161 3.2e-21 106.3 247 36.0
Nitab4.5_0003320g0020 Nicotiana tabacum HOM05D008559 ORTHO05D011161 5.4e-21 105.5 241 37.3
Nitab4.5_0000773g0010 Nicotiana tabacum HOM05D008559 ORTHO05D011161 6.0e-20 102.1 137 48.2
Nitab4.5_0002173g0030 Nicotiana tabacum HOM05D014863 ORTHO05D011161 1.3e-19 100.9 165 40.0
Nitab4.5_0000493g0110 Nicotiana tabacum HOM05D008559 ORTHO05D011161 3.0e-19 99.8 151 44.4
Nitab4.5_0000337g0190 Nicotiana tabacum HOM05D014863 ORTHO05D011161 1.6e-17 94.0 223 35.9
Nitab4.5_0013152g0020 Nicotiana tabacum HOM05D008559 ORTHO05D011161 6.2e-17 92.0 128 43.0
Nitab4.5_0000104g0250 Nicotiana tabacum HOM05D008559 ORTHO05D011161 1.2e-15 87.8 130 43.8
Nitab4.5_0000449g0030 Nicotiana tabacum HOM05D009453 ORTHO05D285332 5.8e-15 85.5 81 59.3
Nitab4.5_0000431g0120 Nicotiana tabacum HOM05D014863 ORTHO05D011161 1.7e-14 84.0 142 40.8
Nitab4.5_0000338g0200 Nicotiana tabacum HOM05D008559 ORTHO05D011161 6.4e-14 82.0 107 46.7
Nitab4.5_0000449g0040 Nicotiana tabacum HOM05D008559 ORTHO05D286507 8.4e-14 81.6 122 42.6
PGSC0003DMG400041497 Solanum tuberosum HOM05D008559 ORTHO05D026183 1.9e-13 80.5 156 33.3
Nitab4.5_0000450g0010 Nicotiana tabacum HOM05D009453 ORTHO05D014242 3.2e-13 79.7 68 63.2
Nitab4.5_0000951g0030 Nicotiana tabacum HOM05D008559 ORTHO05D011161 7.1e-13 78.6 76 57.9
Nitab4.5_0002719g0010 Nicotiana tabacum HOM05D014863 ORTHO05D011161 1.2e-12 77.8 123 40.7
Nitab4.5_0004854g0040 Nicotiana tabacum HOM05D009453 ORTHO05D282750 1.2e-12 77.8 98 50.0
Nitab4.5_0012108g0010 Nicotiana tabacum HOM05D009453 ORTHO05D014242 2.7e-12 76.6 68 61.8
PGSC0003DMG400042155 Solanum tuberosum HOM05D008559 ORTHO05D026183 2.7e-12 76.6 125 36.0
Nitab4.5_0000479g0010 Nicotiana tabacum HOM05D009453 ORTHO05D014242 7.8e-12 75.1 68 61.8
Nitab4.5_0007191g0010 Nicotiana tabacum HOM05D008559 ORTHO05D286381 1.7e-11 73.9 74 62.2
Nitab4.5_0000257g0050 Nicotiana tabacum HOM05D014863 ORTHO05D011161 8.7e-11 71.6 129 42.6
Nitab4.5_0000719g0070 Nicotiana tabacum HOM05D008559 ORTHO05D011161 8.7e-11 71.6 100 45.0
Nitab4.5_0002998g0020 Nicotiana tabacum HOM05D009453 ORTHO05D000002 8.7e-11 71.6 87 49.4
Nitab4.5_0000157g0320 Nicotiana tabacum HOM05D008559 ORTHO05D011161 1.9e-10 70.5 140 37.1
Nitab4.5_0001294g0070 Nicotiana tabacum HOM05D009453 ORTHO05D014242 1.9e-10 70.5 87 49.4
Nitab4.5_0000178g0030 Nicotiana tabacum HOM05D009453 ORTHO05D283752 7.3e-10 68.6 68 55.9
Nitab4.5_0000107g0080 Nicotiana tabacum HOM05D008559 ORTHO05D283367 1.3e-09 67.8 65 50.8
Nitab4.5_0000290g0050 Nicotiana tabacum HOM05D008559 ORTHO05D011161 2.1e-09 67.0 160 33.8
Nitab4.5_0004043g0020 Nicotiana tabacum HOM05D008559 ORTHO05D011161 2.8e-09 66.6 123 38.2
Nitab4.5_0002509g0020 Nicotiana tabacum HOM05D008559 ORTHO05D011161 6.2e-09 65.5 206 33.0
PGSC0003DMG400021037 Solanum tuberosum HOM05D008559 ORTHO05D026183 6.2e-09 65.5 140 28.6
Nitab4.5_0000713g0100 Nicotiana tabacum HOM05D009453 ORTHO05D284354 8.1e-09 65.1 74 52.7
Nitab4.5_0002828g0090 Nicotiana tabacum HOM05D009453 ORTHO05D283180 1.8e-08 63.9 55 65.5
Solyc11g039800.2 Solanum lycopersicum HOM05D008559 ORTHO05D026183 3.1e-08 63.2 104 35.6
Nitab4.5_0000357g0310 Nicotiana tabacum HOM05D009453 ORTHO05D014242 1.5e-07 60.8 60 56.7
Nitab4.5_0017727g0010 Nicotiana tabacum HOM05D009453 ORTHO05D000007 1.5e-07 60.8 68 60.3
Nitab4.5_0001268g0050 Nicotiana tabacum HOM05D008559 ORTHO05D011161 2.6e-07 60.1 74 58.1
Nitab4.5_0000206g0150 Nicotiana tabacum HOM05D008559 ORTHO05D011161 4.4e-07 59.3 64 45.3
Nitab4.5_0001223g0030 Nicotiana tabacum HOM05D009453 ORTHO05D286522 5.8e-07 58.9 50 66.0
Nitab4.5_0002491g0040 Nicotiana tabacum HOM05D016139 ORTHO05D014242 5.8e-07 58.9 69 52.2
Nitab4.5_0000006g0060 Nicotiana tabacum HOM05D008559 ORTHO05D283084 9.9e-07 58.2 59 45.8


User provided reference genes

Program Settings