Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004367g0150 Nicotiana tabacum HOM05D005467 ORTHO05D006523 1.4e-81 306.2 154 100.0
Nitab4.5_0002820g0080 Nicotiana tabacum HOM05D005467 ORTHO05D006523 1.8e-68 262.7 136 96.3
Nitab4.5_0000350g0270 Nicotiana tabacum HOM05D005467 ORTHO05D006523 1.7e-58 229.6 150 76.7
Nitab4.5_0000293g0010 Nicotiana tabacum HOM05D005467 ORTHO05D006523 2.2e-58 229.2 150 75.3
Peaxi162Scf00205g00812 Petunia axillaris HOM05D005467 ORTHO05D006523 4.7e-45 184.9 150 66.7
Peaxi162Scf00205g00928 Petunia axillaris HOM05D005467 ORTHO05D006523 6.6e-39 164.5 140 58.6
CAN.G1489.4 Capsicum annuum HOM05D005467 ORTHO05D006523 1.2e-37 160.2 133 57.9
Potri.010G116200 Populus trichocarpa HOM05D005467 ORTHO05D006523 1.2e-37 160.2 133 55.6
Sopen05g004250 Solanum pennellii HOM05D005467 ORTHO05D006523 8.1e-37 157.5 135 57.8
TAR629G1677 Trochodendron aralioides HOM05D005467 ORTHO05D006523 1.2e-35 153.7 133 53.4
DCAR_007277 Daucus carota HOM05D005467 ORTHO05D006523 2.6e-35 152.5 133 51.9
HanXRQChr15g0477671 Helianthus annuus HOM05D005467 ORTHO05D006523 4.4e-35 151.8 133 53.4
Cfa008565 Carpinus fangiana HOM05D005467 ORTHO05D006523 7.6e-35 151.0 133 54.9
Lj6C750G3 Lonicera japonica HOM05D005467 ORTHO05D006523 7.6e-35 151.0 131 51.9
Peaxi162Scf00159g00824 Petunia axillaris HOM05D005467 ORTHO05D006523 1.7e-34 149.8 136 52.2
PGR119G0286 Punica granatum HOM05D005467 ORTHO05D006523 1.7e-34 149.8 133 54.9
Migut.L00653 Erythranthe guttata HOM05D005467 ORTHO05D006523 2.2e-34 149.4 133 52.6
Migut.L00826 Erythranthe guttata HOM05D005467 ORTHO05D006523 2.2e-34 149.4 133 52.6
Nn3g18021 Nelumbo nucifera HOM05D005467 ORTHO05D006523 2.2e-34 149.4 133 54.1
Ciclev10015390m.g Citrus clementina HOM05D005467 ORTHO05D006523 3.7e-34 148.7 135 53.3
Sabra10G0087600 Salix brachista HOM05D005467 ORTHO05D006523 3.7e-34 148.7 133 51.9
arahy.Tifrunner.gnm1.ann1.F0PHAM Arachis hypogaea HOM05D005467 ORTHO05D006523 4.9e-34 148.3 135 51.1
arahy.Tifrunner.gnm1.ann1.U1J3BU Arachis hypogaea HOM05D005467 ORTHO05D006523 4.9e-34 148.3 135 51.1
ClCG05G022280 Citrullus lanatus HOM05D005467 ORTHO05D006523 6.4e-34 147.9 133 52.6
Thecc.02G211500 Theobroma cacao HOM05D005467 ORTHO05D006523 6.4e-34 147.9 133 50.4
ECA246G2902 Erigeron canadensis HOM05D005467 ORTHO05D006523 8.4e-34 147.5 133 52.6
Lsat_1_v5_gn_3_54101 Lactuca sativa HOM05D005467 ORTHO05D006523 8.4e-34 147.5 133 51.1
Phvul.007G035400 Phaseolus vulgaris HOM05D005467 ORTHO05D006523 8.4e-34 147.5 133 50.4
TWI31G0476 Tripterygium wilfordii HOM05D005467 ORTHO05D006523 8.4e-34 147.5 133 53.4
CSS0047900 Camellia sinensis var. sinensis HOM05D005467 ORTHO05D006523 1.4e-33 146.7 133 52.6
Sabra10G0086000 Salix brachista HOM05D005467 ORTHO05D006523 1.4e-33 146.7 133 51.1
CANSAT01G3134 Cannabis sativa HOM05D005467 ORTHO05D006523 1.9e-33 146.4 134 52.2
Sed0008724 Sechium edule HOM05D005467 ORTHO05D006523 4.1e-33 145.2 135 50.4
Actinidia14942 Actinidia chinensis HOM05D005467 ORTHO05D006523 5.4e-33 144.8 135 51.9
Solyc05g008420.4 Solanum lycopersicum HOM05D005467 ORTHO05D006523 5.4e-33 144.8 118 61.9
MBI10_g46301_MAGBIO Magnolia biondii HOM05D005467 ORTHO05D006523 7.1e-33 144.4 133 48.1
VMungo0720G1946 Vigna mungo HOM05D005467 ORTHO05D006523 9.2e-33 144.1 133 48.9
AUR62039552 Chenopodium quinoa HOM05D005467 ORTHO05D006523 1.2e-32 143.7 133 51.9
Cc11_g09130 Coffea canephora HOM05D005467 ORTHO05D006523 1.6e-32 143.3 133 48.9
Hma1.2p1_0114F.1_g055340 Hydrangea macrophylla HOM05D005467 ORTHO05D006523 1.6e-32 143.3 133 50.4
Peaxi162Scf00159g00823 Petunia axillaris HOM05D005467 ORTHO05D006523 2.1e-32 142.9 136 50.7
Glyma.10G266400 Glycine max HOM05D005467 ORTHO05D006523 2.7e-32 142.5 133 49.6
RcHm_v2.0_Chr4g0433781 Rosa chinensis HOM05D005467 ORTHO05D006523 3.5e-32 142.1 133 51.9
AUR62014129 Chenopodium quinoa HOM05D005467 ORTHO05D006523 4.6e-32 141.7 133 51.9
FvH4_4g26200 Fragaria vesca HOM05D005467 ORTHO05D006523 4.6e-32 141.7 133 50.4
Glyma.20G124100 Glycine max HOM05D005467 ORTHO05D006523 6.0e-32 141.4 133 49.6
MD16G1031500 Malus domestica HOM05D005467 ORTHO05D006523 6.0e-32 141.4 133 50.4
Manes.06G062500 Manihot esculenta HOM05D005467 ORTHO05D006523 6.0e-32 141.4 133 47.4
TPR.G4835 Trifolium pratense HOM05D005467 ORTHO05D006523 6.0e-32 141.4 135 49.6
CsaV3_5G034840 Cucumis sativus L. HOM05D005467 ORTHO05D006523 7.8e-32 141.0 133 48.1
FAN07G0694 Fragaria x ananassa HOM05D005467 ORTHO05D006523 7.8e-32 141.0 133 51.9
Lj5g0001822 Lotus japonicus HOM05D005467 ORTHO05D006523 7.8e-32 141.0 135 51.1
Gohir.D04G138566 Gossypium hirsutum HOM05D005467 ORTHO05D006523 1.0e-31 140.6 134 51.5
Gorai.012G123600 Gossypium raimondii HOM05D005467 ORTHO05D006523 2.3e-31 139.4 134 51.5
CiPaw.05G246600 Carya illinoinensis HOM05D005467 ORTHO05D006523 3.0e-31 139.0 133 48.9
Prupe.1G321400 Prunus persica HOM05D005467 ORTHO05D006523 3.0e-31 139.0 133 48.9
GSVIVG01011792001 Vitis vinifera HOM05D005467 ORTHO05D006523 3.0e-31 139.0 133 49.6
Eucgr.G02222 Eucalyptus grandis HOM05D005467 ORTHO05D006523 3.9e-31 138.7 133 50.4
Lalb_Chr21g0308561 Lupinus albus HOM05D005467 ORTHO05D006523 3.9e-31 138.7 135 47.4
FAN17G2566 Fragaria x ananassa HOM05D005467 ORTHO05D006523 6.6e-31 137.9 132 50.0
Gohir.A04G099200 Gossypium hirsutum HOM05D005467 ORTHO05D006523 6.6e-31 137.9 134 50.7
Rhsim09G0101300 Rhododendron simsii HOM05D005467 ORTHO05D006523 8.6e-31 137.5 145 49.7
Duzib248G1088 Durio zibethinus HOM05D005467 ORTHO05D006523 1.5e-30 136.7 134 50.0
Medtr1g108650 Medicago truncatula HOM05D005467 ORTHO05D006523 1.5e-30 136.7 135 48.1
Nitab4.5_0000350g0200 Nicotiana tabacum HOM05D005467 ORTHO05D006523 1.5e-30 136.7 126 55.6
Ah.02g128100 Amaranthus hybridus HOM05D005467 ORTHO05D006523 2.5e-30 136.0 136 50.7
Psat6g222960 Pisum sativum HOM05D005467 ORTHO05D006523 5.6e-30 134.8 133 49.6
SGA_v2.0_scaffold50G18532 Striga asiatica HOM05D005467 ORTHO05D006523 5.6e-30 134.8 164 42.1
Nitab4.5_0004524g0050 Nicotiana tabacum HOM05D005467 ORTHO05D006523 7.3e-30 134.4 126 54.0
Aqoxy3G00153 Aquilegia oxysepala HOM05D005467 ORTHO05D006523 2.8e-29 132.5 133 47.4
Cpa.g.sc65.104 Carica papaya HOM05D005467 ORTHO05D006523 6.2e-29 131.3 133 48.9
PGSC0003DMG400029189 Solanum tuberosum HOM05D005467 ORTHO05D006523 2.4e-28 129.4 131 48.1
unitig_21.g20024 Utricularia gibba HOM05D000903 ORTHO05D000731 1.2e-27 127.1 121 49.6
PSO782G0553 Papaver somniferum HOM05D005467 ORTHO05D006523 1.5e-27 126.7 133 44.4
Solyc02g038680.1 Solanum lycopersicum HOM05D005467 ORTHO05D006523 3.4e-27 125.6 128 48.4
PSO063G5439 Papaver somniferum HOM05D005467 ORTHO05D006523 5.8e-27 124.8 133 43.6
Sopen02g012000 Solanum pennellii HOM05D005467 ORTHO05D006523 9.9e-27 124.0 128 47.7
Os01g0506200 Oryza sativa ssp. japonica HOM05D005467 ORTHO05D006523 1.7e-26 123.2 133 43.6
PGSC0003DMG400017873 Solanum tuberosum HOM05D005467 ORTHO05D006523 2.2e-26 122.9 131 47.3
Solyc02g038670.3 Solanum lycopersicum HOM05D005467 ORTHO05D006523 4.9e-26 121.7 124 48.4
PGSC0003DMG400029188 Solanum tuberosum HOM05D005467 ORTHO05D006523 6.4e-26 121.3 124 49.2
HPP92_008650 Vanilla planifolia HOM05D005467 ORTHO05D006523 1.1e-25 120.6 132 44.7
Sopen02g012020 Solanum pennellii HOM05D005467 ORTHO05D006523 2.4e-25 119.4 128 44.5
Sopen02g012010 Solanum pennellii HOM05D005467 ORTHO05D006523 3.2e-25 119.0 116 50.0
Solyc02g038650.1 Solanum lycopersicum HOM05D005467 ORTHO05D006523 2.1e-24 116.3 131 42.0
TAR622G1271 Trochodendron aralioides HOM05D005467 ORTHO05D006523 7.8e-24 114.4 107 53.3
Hund24998 Selenicereus undatus HOM05D005467 ORTHO05D006523 1.7e-23 113.2 133 45.1
PGSC0003DMG400023165 Solanum tuberosum HOM05D005467 ORTHO05D006523 2.3e-23 112.8 105 52.4
Ca_11108_v3 Cicer arietinum L. HOM05D005467 ORTHO05D006523 5.1e-23 111.7 133 42.9
QL01p002615 Quercus lobata HOM05D005467 ORTHO05D006523 5.1e-23 111.7 215 31.2
Atru.chr11.358 Acer truncatum HOM05D005467 ORTHO05D006523 5.6e-22 108.2 96 54.2
Zm00001eb341680 Zea mays HOM05D005467 ORTHO05D006523 2.8e-21 105.9 172 33.1
FAN12G1869 Fragaria x ananassa HOM05D005467 ORTHO05D006523 3.6e-21 105.5 133 42.9
FAN12G3855 Fragaria x ananassa HOM05D005467 ORTHO05D006523 1.1e-20 104.0 133 42.1
Sopen02g012080 Solanum pennellii HOM05D005467 ORTHO05D006523 2.4e-20 102.8 105 47.6
vmacro10622 Vaccinium macrocarpon HOM05D005467 ORTHO05D006523 1.7e-18 96.7 84 51.2
SMO172G0164 Selaginella moellendorffii HOM05D005467 ORTHO05D006523 2.4e-17 92.8 136 34.6
PGSC0003DMG400017875 Solanum tuberosum HOM05D005467 ORTHO05D006523 2.7e-16 89.4 77 51.9
PGSC0003DMG400017876 Solanum tuberosum HOM05D005467 ORTHO05D006523 3.5e-16 89.0 128 39.1
ATR0041G011 Amborella trichopoda HOM05D005467 ORTHO05D006523 6.0e-16 88.2 138 36.2
FAN17G1461 Fragaria x ananassa HOM05D005467 ORTHO05D006523 7.3e-14 81.3 72 51.4
Pp3c22_2590 Physcomitrium patens HOM05D005467 ORTHO05D006523 9.6e-14 80.9 115 32.2
Nitab4.5_0000688g0010 Nicotiana tabacum HOM05D005467 ORTHO05D006523 1.6e-13 80.1 92 50.0
CBR_g17592 Chara braunii HOM05D005467 ORTHO05D006523 6.9e-12 74.7 112 39.3
MELO3C012295.2 Cucumis melo HOM05D005467 ORTHO05D006523 6.9e-12 74.7 73 45.2
MSTRG.879 Avicennia marina HOM05D005467 ORTHO05D006523 1.2e-11 73.9 72 43.1
AagrBONN_evm.TU.Sc2ySwM_344.4352 Anthoceros agrestis HOM05D005467 ORTHO05D006523 7.6e-11 71.2 112 30.4
Solyc02g038700.3 Solanum lycopersicum HOM05D005467 ORTHO05D006523 9.9e-11 70.9 66 47.0
CDE07G1108 Ceratophyllum demersum HOM05D005467 ORTHO05D006523 5.5e-09 65.1 74 43.2
MCO12G173 Micromonas commoda HOM05D005467 ORTHO05D006523 1.5e-06 57.0 124 27.4


User provided reference genes

Program Settings