Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004367g0110 Nicotiana tabacum HOM05D006737 ORTHO05D008418 3.2e-209 731.5 360 100.0
Peaxi162Scf00140g01213 Petunia axillaris HOM05D006737 ORTHO05D008418 2.4e-132 476.1 283 84.1
Solyc06g084570.4 Solanum lycopersicum HOM05D006737 ORTHO05D008418 2.4e-132 476.1 352 71.0
CAN.G1209.24 Capsicum annuum HOM05D006737 ORTHO05D008418 7.0e-132 474.6 363 69.1
Sopen06g035940 Solanum pennellii HOM05D006737 ORTHO05D008418 1.3e-130 470.3 348 70.7
FAN27G1696 Fragaria x ananassa HOM05D006737 ORTHO05D008418 8.6e-98 361.3 364 52.5
vmacro02447 Vaccinium macrocarpon HOM05D006737 ORTHO05D008418 3.3e-97 359.4 352 54.8
Haze_04944 Corylus avellana HOM05D006737 ORTHO05D008418 3.6e-96 355.9 363 51.2
GSVIVG01028025001 Vitis vinifera HOM05D006737 ORTHO05D008418 1.1e-95 354.4 343 55.1
Prupe.8G262100 Prunus persica HOM05D006737 ORTHO05D008418 1.4e-95 354.0 366 52.5
Cfa005906 Carpinus fangiana HOM05D006737 ORTHO05D008418 8.9e-95 351.3 365 51.0
FvH4_2g25800 Fragaria vesca HOM05D006737 ORTHO05D008418 9.8e-94 347.8 364 50.8
FAN15G3576 Fragaria x ananassa HOM05D006737 ORTHO05D008418 1.3e-93 347.4 364 50.8
TWI14G0449 Tripterygium wilfordii HOM05D006737 ORTHO05D008418 1.3e-93 347.4 362 50.8
MD03G1288800 Malus domestica HOM05D006737 ORTHO05D008418 1.7e-93 347.1 366 50.5
CSS0030900 Camellia sinensis var. sinensis HOM05D006737 ORTHO05D008418 2.9e-93 346.3 367 51.2
FAN24G1027 Fragaria x ananassa HOM05D006737 ORTHO05D008418 2.9e-93 346.3 364 50.5
MD11G1309100 Malus domestica HOM05D006737 ORTHO05D008418 3.7e-93 345.9 352 52.3
RcHm_v2.0_Chr6g0294111 Rosa chinensis HOM05D006737 ORTHO05D008418 1.1e-92 344.4 366 50.0
SalBow2G2271 Salvia bowleyana HOM05D006737 ORTHO05D008418 3.2e-92 342.8 270 60.4
Cpa.g.sc9.256 Carica papaya HOM05D006737 ORTHO05D008418 4.1e-92 342.4 360 51.9
Ciclev10021225m.g Citrus clementina HOM05D006737 ORTHO05D008418 4.1e-92 342.4 364 49.2
ECA236G1530 Erigeron canadensis HOM05D006737 ORTHO05D008418 2.7e-91 339.7 360 50.0
Atru.chr5.1140 Acer truncatum HOM05D006737 ORTHO05D008418 1.0e-90 337.8 365 48.8
Potri.002G203900 Populus trichocarpa HOM05D006737 ORTHO05D008418 3.0e-90 336.3 363 50.4
Sabra02G0155300 Salix brachista HOM05D006737 ORTHO05D008418 3.9e-90 335.9 393 47.1
MSTRG.12607 Avicennia marina HOM05D006737 ORTHO05D008418 4.3e-89 332.4 370 48.6
TAR365G0544 Trochodendron aralioides HOM05D006737 ORTHO05D008418 7.3e-89 331.6 353 50.7
QL12p028401 Quercus lobata HOM05D006737 ORTHO05D008418 1.6e-88 330.5 362 49.7
Manes.01G219800 Manihot esculenta HOM05D006737 ORTHO05D008418 2.8e-88 329.7 358 48.6
Eucgr.H01107 Eucalyptus grandis HOM05D006737 ORTHO05D008418 3.6e-88 329.3 358 49.7
Lsat_1_v5_gn_8_164261 Lactuca sativa HOM05D006737 ORTHO05D008418 3.6e-88 329.3 360 48.3
Cc01_g20900 Coffea canephora HOM05D006737 ORTHO05D008418 1.1e-87 327.8 337 52.8
Lj6g0001904 Lotus japonicus HOM05D006737 ORTHO05D008418 1.4e-87 327.4 327 51.1
Gohir.A12G130100 Gossypium hirsutum HOM05D006737 ORTHO05D008418 3.1e-87 326.2 330 50.3
EL10Ac7g17513 Beta vulgaris HOM05D006737 ORTHO05D008418 1.2e-86 324.3 344 49.4
FAN20G1602 Fragaria x ananassa HOM05D006737 ORTHO05D008418 1.2e-86 324.3 359 48.5
Nn3g21504 Nelumbo nucifera HOM05D006737 ORTHO05D008418 1.2e-86 324.3 357 49.9
AUR62025575 Chenopodium quinoa HOM05D006737 ORTHO05D008418 1.5e-86 323.9 341 50.4
Gorai.008G144900 Gossypium raimondii HOM05D006737 ORTHO05D008418 1.5e-86 323.9 330 49.7
Hund05430 Selenicereus undatus HOM05D006737 ORTHO05D008418 2.0e-86 323.6 342 48.2
CiPaw.07G109600 Carya illinoinensis HOM05D006737 ORTHO05D008418 5.8e-86 322.0 268 59.3
Glyma.19G211400 Glycine max HOM05D006737 ORTHO05D008418 5.8e-86 322.0 346 50.0
Oeu048335.1 Olea europaea HOM05D006737 ORTHO05D008418 7.6e-86 321.6 248 61.7
Gohir.D12G133900 Gossypium hirsutum HOM05D006737 ORTHO05D008418 9.9e-86 321.2 330 49.4
Phvul.001G207600 Phaseolus vulgaris HOM05D006737 ORTHO05D008418 9.9e-86 321.2 346 49.4
AUR62008669 Chenopodium quinoa HOM05D006737 ORTHO05D008418 4.9e-85 318.9 341 49.6
DCAR_002840 Daucus carota HOM05D006737 ORTHO05D008418 8.4e-85 318.2 271 60.1
Thecc.01G301300 Theobroma cacao HOM05D006737 ORTHO05D008418 1.9e-84 317.0 386 45.3
VMungo1383G2597 Vigna mungo HOM05D006737 ORTHO05D008418 4.1e-84 315.8 277 56.0
Rhsim13G0009900 Rhododendron simsii HOM05D006737 ORTHO05D008418 9.2e-84 314.7 364 46.7
CiPaw.07G109800 Carya illinoinensis HOM05D006737 ORTHO05D008418 1.2e-83 314.3 400 45.2
MBI19_g26092_MAGBIO Magnolia biondii HOM05D006737 ORTHO05D008418 1.2e-83 314.3 354 49.7
Actinidia01489 Actinidia chinensis HOM05D006737 ORTHO05D008418 1.7e-82 310.5 249 60.2
Migut.O00484 Erythranthe guttata HOM05D006737 ORTHO05D008418 1.7e-82 310.5 344 50.0
Migut.N01508 Erythranthe guttata HOM05D006737 ORTHO05D008418 3.9e-82 309.3 349 50.1
PSO407G0435 Papaver somniferum HOM05D006737 ORTHO05D008418 6.6e-82 308.5 337 47.8
Hma1.2p1_0491F.1_g164620 Hydrangea macrophylla HOM05D006737 ORTHO05D008418 1.5e-81 307.4 342 48.2
PSO170G1161 Papaver somniferum HOM05D006737 ORTHO05D008418 3.3e-81 306.2 337 47.2
Aqoxy2G02933 Aquilegia oxysepala HOM05D006737 ORTHO05D008418 7.3e-81 305.1 352 47.2
Gohir.D08G085900 Gossypium hirsutum HOM05D006737 ORTHO05D008418 9.6e-81 304.7 327 48.0
Gorai.004G090400 Gossypium raimondii HOM05D006737 ORTHO05D008418 2.1e-80 303.5 327 48.0
PGR119G0152 Punica granatum HOM05D006737 ORTHO05D008418 2.1e-80 303.5 351 45.3
Gohir.A08G076400 Gossypium hirsutum HOM05D006737 ORTHO05D008418 2.8e-80 303.1 327 47.7
arahy.Tifrunner.gnm1.ann1.AY1VU4 Arachis hypogaea HOM05D006737 ORTHO05D008418 3.1e-79 299.7 346 46.5
SGA_v2.0_scaffold198G41142 Striga asiatica HOM05D006737 ORTHO05D008418 3.1e-79 299.7 282 54.6
C03p37890 Brassica napus HOM05D006737 ORTHO05D008418 1.2e-78 297.7 334 47.9
Migut.J01135 Erythranthe guttata HOM05D006737 ORTHO05D008418 5.8e-78 295.4 340 50.0
BcaB01g02446 Brassica carinata HOM05D006737 ORTHO05D008418 9.9e-78 294.7 333 47.1
Thhalv10028823m.g Eutrema salsugineum HOM05D006737 ORTHO05D008418 2.2e-77 293.5 349 47.3
BolC3t16077H Brassica oleracea HOM05D006737 ORTHO05D008418 2.9e-77 293.1 335 47.8
A03p31080 Brassica napus HOM05D006737 ORTHO05D008418 6.4e-77 292.0 335 47.8
BraA03t12285Z Brassica rapa HOM05D006737 ORTHO05D008418 6.4e-77 292.0 335 47.8
BcaC01g06761 Brassica carinata HOM05D006737 ORTHO05D008418 8.4e-77 291.6 334 47.0
Carub.0006s3475 Capsella rubella HOM05D006737 ORTHO05D008418 1.1e-76 291.2 332 47.9
CANSAT25G2451 Cannabis sativa HOM05D006737 ORTHO05D008418 1.9e-76 290.4 334 47.9
HanXRQChr04g0114161 Helianthus annuus HOM05D006737 ORTHO05D008418 2.4e-76 290.0 320 46.9
AL6G50710 Arabidopsis lyrata HOM05D006737 ORTHO05D008418 4.2e-76 289.3 332 47.3
arahy.Tifrunner.gnm1.ann1.B4PCIP Arachis hypogaea HOM05D006737 ORTHO05D008418 4.2e-76 289.3 366 45.6
Sp6g02290 Schrenkiella parvula HOM05D006737 ORTHO05D008418 7.1e-76 288.5 335 48.1
ClCG01G014930 Citrullus lanatus HOM05D006737 ORTHO05D008418 4.6e-75 285.8 332 47.0
MBI19_g25361_MAGBIO Magnolia biondii HOM05D006737 ORTHO05D008418 1.3e-74 284.3 395 44.1
Sc05g0003760 Simmondsia chinensis HOM05D006737 ORTHO05D008418 6.6e-74 282.0 332 46.4
Aa31LG5G2050 Aethionema arabicum HOM05D006737 ORTHO05D008418 4.3e-73 279.3 281 50.5
Nitab4.5_0002820g0110 Nicotiana tabacum HOM05D006737 ORTHO05D008418 2.1e-72 276.9 140 97.9
MELO3C024580.2 Cucumis melo HOM05D006737 ORTHO05D008418 1.1e-71 274.6 353 45.0
CARHR250600 Cardamine hirsuta HOM05D006737 ORTHO05D008418 1.4e-71 274.2 332 44.9
Duzib138G1512 Durio zibethinus HOM05D006737 ORTHO05D008418 1.8e-71 273.9 299 48.2
CsaV3_6G041030 Cucumis sativus L. HOM05D006737 ORTHO05D008418 3.1e-71 273.1 343 45.5
CDE01G0235 Ceratophyllum demersum HOM05D006737 ORTHO05D008418 2.9e-69 266.5 273 49.5
COL.COLO4_23338 Corchorus olitorius HOM05D006737 ORTHO05D008418 4.9e-69 265.8 222 58.6
Lalb_Chr02g0146391 Lupinus albus HOM05D006737 ORTHO05D008418 1.6e-67 260.8 263 49.8
Lj2A1195G25 Lonicera japonica HOM05D006737 ORTHO05D008418 1.5e-65 254.2 280 49.6
AT4G02405 Arabidopsis thaliana HOM05D006737 ORTHO05D008418 1.5e-62 244.2 337 41.2
Os07g0247100 Oryza sativa ssp. japonica HOM05D006737 ORTHO05D008418 2.7e-59 233.4 278 45.3
Zm00001eb097030 Zea mays HOM05D006737 ORTHO05D008418 1.8e-58 230.7 277 45.1
PGSC0003DMG400024036 Solanum tuberosum HOM05D006737 ORTHO05D008418 1.6e-48 197.6 195 57.4
Sed0017513 Sechium edule HOM05D006737 ORTHO05D008418 3.7e-48 196.4 244 42.6
Oeu010666.1 Olea europaea HOM05D006737 ORTHO05D008418 2.5e-41 173.7 153 52.3
Dinv33057 Davidia involucrata HOM05D006737 ORTHO05D008418 3.8e-37 159.8 200 44.0
Pp3c24_12380 Physcomitrium patens HOM05D006737 ORTHO05D008418 3.2e-36 156.8 288 35.1
VMungo1383G3174 Vigna mungo HOM05D006737 ORTHO05D008418 4.1e-31 139.8 269 34.2
Mapoly0132s0018 Marchantia polymorpha HOM05D006737 ORTHO05D008418 9.1e-31 138.7 249 34.9
arahy.Tifrunner.gnm1.ann1.MB1A81 Arachis hypogaea HOM05D006737 ORTHO05D008418 2.7e-27 127.1 126 50.8
Dinv31287 Davidia involucrata HOM05D006737 ORTHO05D008418 8.2e-24 115.5 89 65.2
Dinv07247 Davidia involucrata HOM05D006737 ORTHO05D008418 2.4e-23 114.0 89 64.0
Dinv17961 Davidia involucrata HOM05D006737 ORTHO05D008418 1.1e-20 105.1 89 59.6
arahy.Tifrunner.gnm1.ann1.MU6BTE Arachis hypogaea HOM05D006737 ORTHO05D008418 2.5e-20 104.0 119 46.2
SEGI_39136 Sequoiadendron giganteum HOM05D006737 ORTHO05D008418 1.7e-16 91.3 138 34.8
BcaB01g02050 Brassica carinata HOM05D006737 ORTHO05D008418 1.8e-10 71.2 104 42.3
Dinv02523 Davidia involucrata HOM05D006737 ORTHO05D008418 5.2e-10 69.7 56 62.5
BcaB01g02447 Brassica carinata HOM05D006737 ORTHO05D008418 4.4e-09 66.6 73 50.7
Dinv32677 Davidia involucrata HOM05D006737 ORTHO05D008418 9.8e-09 65.5 56 57.1
MCO02G241 Micromonas commoda HOM05D006737 ORTHO05D008418 8.3e-08 62.4 212 26.4
Atru.chr9.1259 Acer truncatum HOM05D000593 ORTHO05D002268 1.6e-06 58.2 38 73.7
Atru.chr3.1390 Acer truncatum HOM05D000593 ORTHO05D000562 3.5e-06 57.0 38 71.1


User provided reference genes

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