Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004364g0010 Nicotiana tabacum HOM05D004113 ORTHO05D005233 1.0e-73 280.0 146 100.0
Nitab4.5_0004809g0010 Nicotiana tabacum HOM05D001578 ORTHO05D001207 8.7e-49 197.2 172 68.0
Nitab4.5_0001270g0060 Nicotiana tabacum HOM05D004113 ORTHO05D005233 1.9e-27 126.3 163 47.9
PGSC0003DMG400037039 Solanum tuberosum HOM05D004113 ORTHO05D005233 7.9e-26 120.9 160 48.8
PGSC0003DMG400037656 Solanum tuberosum HOM05D004113 ORTHO05D005233 3.4e-21 105.5 172 38.4
PGSC0003DMG400040471 Solanum tuberosum HOM05D004113 ORTHO05D001819 4.5e-21 105.1 172 39.5
PGSC0003DMG400044426 Solanum tuberosum HOM05D004113 ORTHO05D005233 5.0e-20 101.7 158 39.9
PGSC0003DMG400035074 Solanum tuberosum HOM05D023375 ORTHO05D005233 2.5e-11 72.8 54 64.8
Nitab4.5_0001270g0070 Nicotiana tabacum HOM05D004113 ORTHO05D005233 4.7e-10 68.6 59 62.7
Actinidia21379 Actinidia chinensis HOM05D001578 ORTHO05D001207 3.3e-08 62.4 169 30.2
Rhsim03G0038600 Rhododendron simsii HOM05D000036 ORTHO05D005472 7.5e-08 61.2 176 30.7
TAR365G0500 Trochodendron aralioides HOM05D001578 ORTHO05D001207 1.7e-07 60.1 80 45.0
Manes.10G035200 Manihot esculenta HOM05D004113 ORTHO05D005233 3.7e-07 58.9 79 44.3
Thecc.01G317500 Theobroma cacao HOM05D001578 ORTHO05D001207 3.7e-07 58.9 86 38.4
CAN.G758.21 Capsicum annuum HOM05D000365 ORTHO05D000154 4.8e-07 58.5 150 28.0
Rhsim03G0038700 Rhododendron simsii HOM05D001578 ORTHO05D001207 6.3e-07 58.2 154 31.2
Manes.10G035400 Manihot esculenta HOM05D004113 ORTHO05D005233 1.4e-06 57.0 79 43.0
Rhsim03G0038400 Rhododendron simsii HOM05D001578 ORTHO05D001207 3.1e-06 55.8 154 31.2
Prupe.3G007700 Prunus persica HOM05D001578 ORTHO05D001207 4.1e-06 55.5 175 28.6
CANSAT78G0727 Cannabis sativa HOM05D001578 ORTHO05D001207 5.3e-06 55.1 93 37.6
Rhsim03G0038200 Rhododendron simsii HOM05D001578 ORTHO05D001207 5.3e-06 55.1 153 30.7
vmacro15637 Vaccinium macrocarpon HOM05D000074 ORTHO05D001262 7.0e-06 54.7 85 37.6
Manes.10G035700 Manihot esculenta HOM05D004113 ORTHO05D005233 9.1e-06 54.3 146 31.5
PGSC0003DMG400021148 Solanum tuberosum HOM05D023375 ORTHO05D020280 9.1e-06 54.3 68 44.1


User provided reference genes

Program Settings