Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004346g0010 Nicotiana tabacum HOM05D004564 ORTHO05D006106 0.0e+00 1650.2 843 100.0
Sopen08g021130 Solanum pennellii HOM05D004564 ORTHO05D006106 0.0e+00 1461.8 871 88.1
CAN.G348.3 Capsicum annuum HOM05D004564 ORTHO05D006106 0.0e+00 1457.2 871 87.8
Solyc08g067190.4 Solanum lycopersicum HOM05D004564 ORTHO05D006106 0.0e+00 1429.5 921 83.1
Nitab4.5_0000508g0020 Nicotiana tabacum HOM05D004564 ORTHO05D006106 0.0e+00 1323.1 866 83.1
Peaxi162Scf00922g00319 Petunia axillaris HOM05D004564 ORTHO05D006106 0.0e+00 1253.4 774 84.8
Dinv03683 Davidia involucrata HOM05D004564 ORTHO05D006106 0.0e+00 1167.9 850 71.3
Actinidia32511 Actinidia chinensis HOM05D004564 ORTHO05D006106 0.0e+00 1160.2 864 69.8
Cc05_g01430 Coffea canephora HOM05D004564 ORTHO05D006106 0.0e+00 1153.7 871 69.2
CSS0004840 Camellia sinensis var. sinensis HOM05D004564 ORTHO05D006106 0.0e+00 1151.0 870 69.7
MSTRG.6616 Avicennia marina HOM05D004564 ORTHO05D006106 0.0e+00 1144.4 861 68.6
GSVIVG01020836001 Vitis vinifera HOM05D004564 ORTHO05D006106 0.0e+00 1120.9 865 67.6
CiPaw.04G137200 Carya illinoinensis HOM05D004564 ORTHO05D006106 0.0e+00 1116.3 871 67.5
SalBow7G3717 Salvia bowleyana HOM05D004564 ORTHO05D006106 0.0e+00 1112.8 872 66.7
TWI59G1136 Tripterygium wilfordii HOM05D004564 ORTHO05D006106 0.0e+00 1111.3 871 65.8
DCAR_016941 Daucus carota HOM05D004564 ORTHO05D006106 0.0e+00 1099.7 871 65.7
CsaV3_4G007910 Cucumis sativus L. HOM05D004564 ORTHO05D006106 0.0e+00 1092.8 871 65.6
Prupe.3G177800 Prunus persica HOM05D004564 ORTHO05D006106 0.0e+00 1085.1 871 65.3
Thecc.01G168400 Theobroma cacao HOM05D004564 ORTHO05D006106 0.0e+00 1083.9 871 65.0
QL08p045017 Quercus lobata HOM05D004564 ORTHO05D006106 0.0e+00 1083.6 946 62.5
Migut.M00072 Erythranthe guttata HOM05D004564 ORTHO05D006106 0.0e+00 1078.9 871 65.4
MD09G1148300 Malus domestica HOM05D004564 ORTHO05D006106 0.0e+00 1078.5 871 64.8
Gorai.007G175000 Gossypium raimondii HOM05D004564 ORTHO05D006106 0.0e+00 1075.1 873 64.4
CANSAT25G1027 Cannabis sativa HOM05D004564 ORTHO05D006106 1.2e-311 1072.8 871 64.3
Gohir.A11G157200 Gossypium hirsutum HOM05D004564 ORTHO05D006106 6.9e-311 1070.5 873 64.4
Gohir.D11G164200 Gossypium hirsutum HOM05D004564 ORTHO05D006106 3.3e-310 1068.1 873 64.0
ClCG07G010420 Citrullus lanatus HOM05D004564 ORTHO05D006106 5.7e-310 1067.4 868 64.6
TAR369G0268 Trochodendron aralioides HOM05D004564 ORTHO05D006106 1.1e-308 1063.1 871 65.3
Potri.004G081200 Populus trichocarpa HOM05D004564 ORTHO05D006106 2.0e-307 1058.9 861 64.8
RcHm_v2.0_Chr2g0152251 Rosa chinensis HOM05D004564 ORTHO05D006106 1.1e-305 1053.1 871 63.8
Manes.01G123700 Manihot esculenta HOM05D004564 ORTHO05D006106 4.2e-305 1051.2 865 63.9
arahy.Tifrunner.gnm1.ann1.PNUX2Z Arachis hypogaea HOM05D004564 ORTHO05D006106 3.3e-302 1041.6 879 63.6
arahy.Tifrunner.gnm1.ann1.THQ3DC Arachis hypogaea HOM05D004564 ORTHO05D006106 4.4e-302 1041.2 872 63.8
FvH4_6g38720 Fragaria vesca HOM05D004564 ORTHO05D006106 4.8e-301 1037.7 871 63.1
FAN09G3866 Fragaria x ananassa HOM05D004564 ORTHO05D006106 2.4e-300 1035.4 885 62.3
Ca_06263_v3 Cicer arietinum L. HOM05D004564 ORTHO05D006106 1.0e-298 1030.0 911 59.9
Sabra04G0053900 Salix brachista HOM05D004564 ORTHO05D006106 1.3e-298 1029.6 880 62.3
Duzib133G1099 Durio zibethinus HOM05D004564 ORTHO05D006106 1.9e-297 1025.8 871 62.6
TPR.G10155 Trifolium pratense HOM05D004564 ORTHO05D006106 5.5e-297 1024.2 872 62.4
PSO170G0418 Papaver somniferum HOM05D004564 ORTHO05D006106 1.2e-296 1023.1 862 63.7
PSO782G0424 Papaver somniferum HOM05D004564 ORTHO05D006106 6.1e-296 1020.8 862 63.1
VMungo0647G1349 Vigna mungo HOM05D004564 ORTHO05D006106 1.8e-295 1019.2 872 62.2
FAN14G4455 Fragaria x ananassa HOM05D004564 ORTHO05D006106 2.3e-295 1018.8 885 62.0
Cpa.g.sc119.28 Carica papaya HOM05D004564 ORTHO05D006106 4.0e-295 1018.1 883 62.6
ECA247G1853 Erigeron canadensis HOM05D004564 ORTHO05D006106 2.0e-294 1015.8 871 62.1
SGA_v2.0_scaffold181G39711 Striga asiatica HOM05D004564 ORTHO05D006106 2.6e-294 1015.4 941 58.8
LjContig00049g0003012 Lotus japonicus HOM05D004564 ORTHO05D006106 4.4e-294 1014.6 883 61.7
Glyma.14G030500 Glycine max HOM05D004564 ORTHO05D006106 6.3e-293 1010.7 872 62.4
Nn7g37923 Nelumbo nucifera HOM05D004564 ORTHO05D006106 6.3e-293 1010.7 814 65.0
Phvul.008G194400 Phaseolus vulgaris HOM05D004564 ORTHO05D006106 1.8e-292 1009.2 874 62.1
Haze_13558 Corylus avellana HOM05D004564 ORTHO05D006106 7.0e-292 1007.3 1023 56.3
PGR042G1847 Punica granatum HOM05D004564 ORTHO05D006106 1.2e-291 1006.5 871 62.2
Lsat_1_v5_gn_9_29980 Lactuca sativa HOM05D004564 ORTHO05D006106 4.5e-291 1004.6 874 62.2
Medtr5g091020 Medicago truncatula HOM05D004564 ORTHO05D006106 4.2e-289 998.0 864 61.5
HanXRQChr10g0292821 Helianthus annuus HOM05D004564 ORTHO05D006106 3.0e-287 991.9 858 61.8
Lj1g0025808 Lotus japonicus HOM05D004564 ORTHO05D006106 4.4e-286 988.0 883 60.8
COL.COLO4_38399 Corchorus olitorius HOM05D004564 ORTHO05D006106 1.3e-285 986.5 886 59.3
FAN05G0785 Fragaria x ananassa HOM05D004564 ORTHO05D006106 1.0e-282 976.9 1035 53.1
THA.LOC104800817 Tarenaya hassleriana HOM05D004564 ORTHO05D006106 5.6e-281 971.1 873 59.3
Oeu022916.1 Olea europaea HOM05D004564 ORTHO05D006106 2.2e-277 959.1 1054 52.2
Rhsim12G0010800 Rhododendron simsii HOM05D004564 ORTHO05D006106 1.1e-276 956.8 859 61.6
AUR62022316 Chenopodium quinoa HOM05D004564 ORTHO05D006106 2.4e-276 955.7 838 59.3
Sc06g0007580 Simmondsia chinensis HOM05D004564 ORTHO05D006106 2.4e-276 955.7 871 58.6
SalBow1G3587 Salvia bowleyana HOM05D004564 ORTHO05D006106 3.3e-273 945.3 728 67.2
Aa31LG1G7670 Aethionema arabicum HOM05D004564 ORTHO05D006106 2.3e-271 939.1 871 56.4
BcaB02g06779 Brassica carinata HOM05D004564 ORTHO05D006106 8.9e-271 937.2 871 56.5
Sed0025117 Sechium edule HOM05D004564 ORTHO05D006106 2.0e-270 936.0 765 64.3
Aqoxy1G01488 Aquilegia oxysepala HOM05D004564 ORTHO05D006106 2.6e-270 935.6 866 59.0
Sp1g05350 Schrenkiella parvula HOM05D004564 ORTHO05D006106 3.4e-270 935.3 874 57.4
EL10Ac1g01740 Beta vulgaris HOM05D004564 ORTHO05D006106 5.8e-270 934.5 871 56.7
BraA10t42789Z Brassica rapa HOM05D004564 ORTHO05D006106 9.8e-270 933.7 879 56.0
AL1G16620 Arabidopsis lyrata HOM05D004564 ORTHO05D006106 1.9e-268 929.5 875 56.6
A10p05220 Brassica napus HOM05D004564 ORTHO05D006106 4.1e-268 928.3 873 56.0
C05p04820 Brassica napus HOM05D004564 ORTHO05D006106 5.4e-268 927.9 879 56.2
BolC5t29255H Brassica oleracea HOM05D004564 ORTHO05D006106 9.2e-268 927.2 879 56.0
AT1G06590 Arabidopsis thaliana HOM05D004564 ORTHO05D006106 1.3e-266 923.3 873 56.0
Carub.0001s0595 Capsella rubella HOM05D004564 ORTHO05D006106 5.6e-265 917.9 876 55.9
Ciclev10030760m.g Citrus clementina HOM05D004564 ORTHO05D006106 4.1e-260 901.7 720 66.0
Thhalv10006743m.g Eutrema salsugineum HOM05D004564 ORTHO05D006106 3.9e-258 895.2 871 55.5
A09p66910 Brassica napus HOM05D004564 ORTHO05D006106 4.7e-256 888.3 876 54.0
Cfa023356 Carpinus fangiana HOM05D004564 ORTHO05D006106 4.7e-256 888.3 858 58.7
BraA09t42026Z Brassica rapa HOM05D004564 ORTHO05D006106 8.4e-253 877.5 899 52.6
Hund26665 Selenicereus undatus HOM05D004564 ORTHO05D006106 2.4e-252 875.9 967 51.6
AUR62034940 Chenopodium quinoa HOM05D004564 ORTHO05D006106 1.0e-250 870.5 823 56.5
Ah.05g168440 Amaranthus hybridus HOM05D004564 ORTHO05D006106 3.8e-245 852.0 872 53.4
Lj1A591G26 Lonicera japonica HOM05D004564 ORTHO05D006106 7.1e-244 847.8 661 68.5
unitig_37.g12587 Utricularia gibba HOM05D004564 ORTHO05D006106 2.3e-242 842.8 902 53.3
C08p51140 Brassica napus HOM05D004564 ORTHO05D006106 1.1e-241 840.5 872 52.1
BolC8t52640H Brassica oleracea HOM05D004564 ORTHO05D006106 5.6e-241 838.2 889 51.7
MELO3C016147.2 Cucumis melo HOM05D004564 ORTHO05D006106 1.9e-233 813.1 644 65.4
Os12g0626300 Oryza sativa ssp. japonica HOM05D004564 ORTHO05D006106 3.4e-222 775.8 871 51.2
QL93p2016_0008 Quercus lobata HOM05D004564 ORTHO05D006106 3.2e-220 769.2 601 66.7
Eucgr.A02026 Eucalyptus grandis HOM05D004564 ORTHO05D006106 9.3e-220 767.7 681 61.5
Atru.chr6.2044 Acer truncatum HOM05D004564 ORTHO05D006106 7.6e-214 748.0 590 66.9
Zm00001eb128180 Zea mays HOM05D004564 ORTHO05D006106 2.1e-211 740.0 868 48.3
Lalb_Chr10g0106571 Lupinus albus HOM05D004564 ORTHO05D006106 4.1e-191 672.5 570 60.9
vmacro08736 Vaccinium macrocarpon HOM05D004564 ORTHO05D006106 2.0e-169 600.5 480 67.5
CARHR006200 Cardamine hirsuta HOM05D004564 ORTHO05D006106 4.7e-163 579.3 520 58.1
Psat2g017160 Pisum sativum HOM05D004564 ORTHO05D006106 4.4e-161 572.8 489 63.0
Hma1.2p1_0539F.1_g174590 Hydrangea macrophylla HOM05D004564 ORTHO05D006106 9.5e-140 501.9 412 62.9
FAN02G2671 Fragaria x ananassa HOM05D004564 ORTHO05D006106 8.9e-138 495.4 386 67.9
ATR0763G133 Amborella trichopoda HOM05D004564 ORTHO05D006106 1.5e-137 494.6 506 54.2
Pp3c3_33140 Physcomitrium patens HOM05D004564 ORTHO05D006106 2.1e-134 484.2 881 38.0
Psat2g017120 Pisum sativum HOM05D004564 ORTHO05D006106 6.6e-133 479.2 378 65.1
AagrBONN_evm.TU.Sc2ySwM_228.5505 Anthoceros agrestis HOM05D004564 ORTHO05D006106 7.3e-124 449.1 875 36.1
vmacro08737 Vaccinium macrocarpon HOM05D004564 ORTHO05D006106 7.3e-124 449.1 634 44.5
BcaNung07074 Brassica carinata HOM05D004564 ORTHO05D006106 4.3e-116 423.3 390 56.7
MBI18_g13604_MAGBIO Magnolia biondii HOM05D004564 ORTHO05D006106 1.4e-114 418.3 858 35.5
SHI30099 Sapria himalayana HOM05D004564 ORTHO05D006106 4.5e-113 413.3 563 44.8
SMO174G0184 Selaginella moellendorffii HOM05D004564 ORTHO05D006106 1.9e-111 407.9 860 34.4
Mapoly0007s0190 Marchantia polymorpha HOM05D004564 ORTHO05D006106 1.0e-109 402.1 887 33.9
HPP92_001899 Vanilla planifolia HOM05D004564 ORTHO05D006106 1.3e-96 358.6 674 36.9
arahy.Tifrunner.gnm1.ann1.UKG9X7 Arachis hypogaea HOM05D004564 ORTHO05D006106 1.2e-89 335.5 345 54.8
CAN.G3149.1 Capsicum annuum HOM05D004564 ORTHO05D006106 2.0e-89 334.7 228 82.0
CBR_g44342 Chara braunii HOM05D000019 ORTHO05D000353 5.0e-80 303.5 536 36.6
Lalb_Chr10g0106581 Lupinus albus HOM05D004564 ORTHO05D006106 6.1e-78 296.6 250 64.8
MD17G1134700 Malus domestica HOM05D004564 ORTHO05D006106 1.2e-68 265.8 194 72.2
HPP92_001867 Vanilla planifolia HOM05D004564 ORTHO05D006106 1.3e-59 235.7 499 37.3
SEGI_14916 Sequoiadendron giganteum HOM05D004564 ORTHO05D006106 6.6e-56 223.4 230 53.9
TAR626G0359 Trochodendron aralioides HOM05D004564 ORTHO05D006106 8.6e-56 223.0 152 73.0
MD17G1134600 Malus domestica HOM05D004564 ORTHO05D006106 3.4e-52 211.1 259 46.7
GSVIVG01013077001 Vitis vinifera HOM05D004564 ORTHO05D006106 2.7e-49 201.4 191 58.1
Peaxi162Scf00922g00318 Petunia axillaris HOM05D004564 ORTHO05D006106 4.4e-36 157.5 86 95.3
BcaNung07000 Brassica carinata HOM05D004564 ORTHO05D006106 2.1e-33 148.7 123 56.9
CDE02G3007 Ceratophyllum demersum HOM05D004564 ORTHO05D006106 4.7e-30 137.5 103 67.0
SHI30097 Sapria himalayana HOM05D004564 ORTHO05D006106 6.8e-29 133.7 222 36.0
arahy.Tifrunner.gnm1.ann1.RHC2N4 Arachis hypogaea HOM05D000056 ORTHO05D006106 2.4e-26 125.2 158 46.2
Glyma.02G284500 Glycine max HOM05D004564 ORTHO05D006106 1.2e-25 122.9 167 44.3
ATR0763G243 Amborella trichopoda HOM05D004564 ORTHO05D006106 4.6e-25 120.9 133 47.4
ATR0820G167 Amborella trichopoda HOM05D004564 ORTHO05D006106 4.6e-25 120.9 120 54.2
Rhsim02G0232100 Rhododendron simsii HOM05D000252 ORTHO05D000307 1.7e-24 119.0 145 51.0
Phvul.001G172501 Phaseolus vulgaris HOM05D004564 ORTHO05D006106 1.6e-22 112.5 133 48.9
ATR0598G245 Amborella trichopoda HOM05D004564 ORTHO05D006106 4.7e-22 110.9 105 59.0
Lj5g0002046 Lotus japonicus HOM05D004564 ORTHO05D000491 6.8e-21 107.1 196 37.8
Rhsim12G0011200 Rhododendron simsii HOM05D004564 ORTHO05D000827 1.2e-20 106.3 93 65.6
ATR0763G128 Amborella trichopoda HOM05D004564 ORTHO05D006106 2.6e-20 105.1 76 61.8
Zm00001eb370760 Zea mays HOM05D004564 ORTHO05D006106 2.2e-19 102.1 65 75.4
TPR.G10922 Trifolium pratense HOM05D004564 ORTHO05D006106 9.3e-18 96.7 84 64.3
Lalb_Chr10g0106561 Lupinus albus HOM05D004564 ORTHO05D006106 3.1e-13 81.6 60 66.7
Rhsim12G0011600 Rhododendron simsii HOM05D004564 ORTHO05D000827 2.6e-12 78.6 66 66.7
TAR626G0994 Trochodendron aralioides HOM05D004564 ORTHO05D006106 2.6e-12 78.6 52 67.3
Rhsim12G0011100 Rhododendron simsii HOM05D004564 ORTHO05D006106 4.2e-10 71.2 69 47.8
Lj5g0014248 Lotus japonicus HOM05D004564 ORTHO05D006106 5.4e-10 70.9 84 45.2
Rhsim12G0011500 Rhododendron simsii HOM05D004564 ORTHO05D006106 1.2e-09 69.7 81 44.4
TPR.G7402 Trifolium pratense HOM05D023930 ORTHO05D006106 2.7e-09 68.6 132 40.2
MCO11G813 Micromonas commoda HOM05D004564 ORTHO05D006106 3.5e-09 68.2 584 21.9
SEGI_30840 Sequoiadendron giganteum HOM05D004564 ORTHO05D006106 6.0e-09 67.4 116 35.3
TPR.G35705 Trifolium pratense HOM05D023930 ORTHO05D018030 1.3e-08 66.2 130 40.0
Cre01.g034650 Chlamydomonas reinhardtii HOM05D004564 ORTHO05D006106 1.7e-08 65.9 511 22.3


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