Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004342g0150 Nicotiana tabacum HOM05D000302 ORTHO05D286395 3.4e-77 291.6 146 100.0
PGSC0003DMG400024611 Solanum tuberosum HOM05D000302 ORTHO05D000334 1.9e-27 126.3 164 47.6
Peaxi162Scf00017g03134 Petunia axillaris HOM05D000302 ORTHO05D000334 7.2e-27 124.4 179 47.5
Sopen03g033630 Solanum pennellii HOM05D000302 ORTHO05D000334 1.2e-26 123.6 166 45.8
Solyc03g114560.2 Solanum lycopersicum HOM05D000302 ORTHO05D000334 1.6e-26 123.2 168 47.0
Solyc03g114540.2 Solanum lycopersicum HOM05D000302 ORTHO05D000334 2.7e-26 122.5 166 45.2
Sopen03g033640 Solanum pennellii HOM05D000302 ORTHO05D000334 4.7e-26 121.7 168 46.4
PGSC0003DMG401024610 Solanum tuberosum HOM05D000302 ORTHO05D000334 1.8e-25 119.8 168 45.2
Solyc03g114530.4 Solanum lycopersicum HOM05D000302 ORTHO05D000334 2.0e-24 116.3 165 45.5
PGSC0003DMG402024610 Solanum tuberosum HOM05D000302 ORTHO05D000334 1.1e-22 110.5 165 43.6
Sopen03g033620 Solanum pennellii HOM05D000302 ORTHO05D000334 1.8e-22 109.8 168 44.0
CAN.G982.23 Capsicum annuum HOM05D000302 ORTHO05D000334 1.3e-20 103.6 143 44.1
CAN.G982.16 Capsicum annuum HOM05D000302 ORTHO05D000334 2.7e-18 95.9 158 39.9
Dinv36849 Davidia involucrata HOM05D000302 ORTHO05D000334 8.2e-15 84.3 160 38.1
Nitab4.5_0000208g0060 Nicotiana tabacum HOM05D000302 ORTHO05D000334 1.1e-14 84.0 135 37.0
Peaxi162Scf00119g00116 Petunia axillaris HOM05D000302 ORTHO05D000334 3.5e-13 79.0 157 35.7
Solyc03g114550.2 Solanum lycopersicum HOM05D000302 ORTHO05D000334 4.5e-13 78.6 123 41.5
Cc00_g21990 Coffea canephora HOM05D000302 ORTHO05D000334 3.8e-12 75.5 144 35.4
Cc01_g03400 Coffea canephora HOM05D000302 ORTHO05D000334 6.1e-10 68.2 161 32.9
PGSC0003DMG400000650 Solanum tuberosum HOM05D000302 ORTHO05D000334 1.0e-09 67.4 183 29.5
Cc04_g09850 Coffea canephora HOM05D000302 ORTHO05D000334 4.0e-09 65.5 160 31.9
Dinv36848 Davidia involucrata HOM05D000302 ORTHO05D000334 6.7e-09 64.7 145 32.4
CSS0010819 Camellia sinensis var. sinensis HOM05D000302 ORTHO05D000334 8.8e-09 64.3 160 28.8
Lj5C139T12 Lonicera japonica HOM05D000302 ORTHO05D000334 3.3e-08 62.4 145 29.0
Solyc12g039070.2 Solanum lycopersicum HOM05D000302 ORTHO05D000334 3.3e-08 62.4 159 30.2
Dinv36845 Davidia involucrata HOM05D000302 ORTHO05D000334 4.4e-08 62.0 145 31.7
PGSC0003DMG400022109 Solanum tuberosum HOM05D000302 ORTHO05D000334 4.4e-08 62.0 159 30.8
SGA_v2.0_scaffold87G26951 Striga asiatica HOM05D000131 ORTHO05D000086 7.5e-08 61.2 64 50.0
Cc05_g04400 Coffea canephora HOM05D000302 ORTHO05D000334 2.2e-07 59.7 66 43.9
DCAR_011595 Daucus carota HOM05D000302 ORTHO05D000334 3.7e-07 58.9 62 46.8
Dinv38616 Davidia involucrata HOM05D000302 ORTHO05D000334 4.8e-07 58.5 66 43.9
Lj9A435G86 Lonicera japonica HOM05D000302 ORTHO05D000334 4.8e-07 58.5 61 41.0
SGA_v2.0_scaffold63G21670 Striga asiatica HOM05D000131 ORTHO05D000086 4.8e-07 58.5 62 41.9
TWI81G0207 Tripterygium wilfordii HOM05D000302 ORTHO05D000334 1.1e-06 57.4 160 27.5
DCAR_011594 Daucus carota HOM05D000302 ORTHO05D000334 1.8e-06 56.6 62 45.2
TWI81G0584 Tripterygium wilfordii HOM05D000302 ORTHO05D000334 2.4e-06 56.2 177 26.0
Cc00_g26560 Coffea canephora HOM05D000302 ORTHO05D000334 3.1e-06 55.8 63 38.1
TWI81G0750 Tripterygium wilfordii HOM05D000302 ORTHO05D000334 3.1e-06 55.8 160 26.9
Lj5A139T80 Lonicera japonica HOM05D000302 ORTHO05D000334 4.1e-06 55.5 82 36.6
TWI81G0324 Tripterygium wilfordii HOM05D000302 ORTHO05D000334 5.3e-06 55.1 158 27.2
Lj5A139T79 Lonicera japonica HOM05D000302 ORTHO05D000334 7.0e-06 54.7 82 37.8
Dinv36846 Davidia involucrata HOM05D000302 ORTHO05D000334 9.1e-06 54.3 61 47.5


User provided reference genes

Program Settings