Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004342g0110 Nicotiana tabacum HOM05D007960 ORTHO05D010026 9.9e-59 229.9 119 100.0
Nitab4.5_0000646g0060 Nicotiana tabacum HOM05D007960 ORTHO05D010026 9.6e-54 213.4 119 94.1
Solyc03g114430.1 Solanum lycopersicum HOM05D007960 ORTHO05D010026 4.8e-37 157.9 120 68.3
Peaxi162Scf00017g03010 Petunia axillaris HOM05D007960 ORTHO05D001491 6.9e-36 154.1 112 74.1
Sopen03g033530 Solanum pennellii HOM05D007960 ORTHO05D010026 4.5e-35 151.4 120 65.8
PGSC0003DMG400041876 Solanum tuberosum HOM05D007960 ORTHO05D010026 1.1e-30 136.7 120 61.7
Hma1.2p1_0340F.1_g130110 Hydrangea macrophylla HOM05D007960 ORTHO05D010026 2.1e-16 89.4 123 48.0
Cc04_g07760 Coffea canephora HOM05D007960 ORTHO05D010026 2.7e-16 89.0 101 52.5
TAR371G0138 Trochodendron aralioides HOM05D007960 ORTHO05D010026 4.6e-16 88.2 92 52.2
Nn3g17652 Nelumbo nucifera HOM05D007960 ORTHO05D010026 2.3e-15 85.9 97 53.6
QL10p022177 Quercus lobata HOM05D007960 ORTHO05D010026 1.5e-14 83.2 94 52.1
Haze_18568 Corylus avellana HOM05D007960 ORTHO05D010026 2.5e-14 82.4 74 60.8
Haze_18570 Corylus avellana HOM05D007960 ORTHO05D010026 2.5e-14 82.4 74 60.8
Psat1g027680 Pisum sativum HOM05D007960 ORTHO05D010026 7.4e-14 80.9 72 56.9
Ah.11g047280 Amaranthus hybridus HOM05D007960 ORTHO05D010026 1.3e-13 80.1 103 42.7
TPR.G31006 Trifolium pratense HOM05D007960 ORTHO05D010026 1.3e-13 80.1 66 63.6
FAN18G0932 Fragaria x ananassa HOM05D000227 ORTHO05D001491 1.7e-13 79.7 76 55.3
Medtr2g056070 Medicago truncatula HOM05D007960 ORTHO05D010026 1.7e-13 79.7 65 63.1
Lj1g0016835 Lotus japonicus HOM05D007960 ORTHO05D010026 2.2e-13 79.3 73 58.9
CiPaw.15G122900 Carya illinoinensis HOM05D007960 ORTHO05D010026 2.8e-13 79.0 123 41.5
FAN13G1649 Fragaria x ananassa HOM05D000227 ORTHO05D001491 6.3e-13 77.8 76 55.3
Lsat_1_v5_gn_1_15660 Lactuca sativa HOM05D007960 ORTHO05D010026 1.1e-12 77.0 101 41.6
Atru.chr9.701 Acer truncatum HOM05D007960 ORTHO05D010026 2.4e-12 75.9 61 63.9
RcHm_v2.0_Chr7g0184281 Rosa chinensis HOM05D007960 ORTHO05D010026 2.4e-12 75.9 76 55.3
VMungo1215G0525 Vigna mungo HOM05D007960 ORTHO05D010026 5.3e-12 74.7 62 59.7
Cpa.g.sc13.82 Carica papaya HOM05D007960 ORTHO05D010026 9.1e-12 73.9 63 60.3
ECA247G3950 Erigeron canadensis HOM05D007960 ORTHO05D010026 9.1e-12 73.9 120 38.3
Dinv38606 Davidia involucrata HOM05D000227 ORTHO05D001491 1.5e-11 73.2 91 47.3
Thecc.03G114600 Theobroma cacao HOM05D007960 ORTHO05D010026 1.5e-11 73.2 64 59.4
Ciclev10024471m.g Citrus clementina HOM05D007960 ORTHO05D010026 2.0e-11 72.8 106 44.3
Sc04g0003840 Simmondsia chinensis HOM05D007960 ORTHO05D010026 2.0e-11 72.8 119 41.2
Lalb_Chr13g0302531 Lupinus albus HOM05D007960 ORTHO05D010026 2.6e-11 72.4 75 52.0
Sc04g0003850 Simmondsia chinensis HOM05D007960 ORTHO05D010026 2.6e-11 72.4 119 39.5
Cfa019847 Carpinus fangiana HOM05D007960 ORTHO05D010026 3.4e-11 72.0 74 56.8
Sp5g29280 Schrenkiella parvula HOM05D007960 ORTHO05D010026 4.5e-11 71.6 130 40.0
Glyma.17G123900 Glycine max HOM05D007960 ORTHO05D010026 5.9e-11 71.2 60 60.0
Phvul.003G179700 Phaseolus vulgaris HOM05D007960 ORTHO05D010026 5.9e-11 71.2 86 45.3
AL2G33950 Arabidopsis lyrata HOM05D007960 ORTHO05D010026 2.9e-10 68.9 119 41.2
Gohir.A03G074200 Gossypium hirsutum HOM05D007960 ORTHO05D010026 3.8e-10 68.6 69 53.6
THA.LOC104812118 Tarenaya hassleriana HOM05D007960 ORTHO05D010026 3.8e-10 68.6 78 53.8
MD14G1219300 Malus domestica HOM05D007960 ORTHO05D010026 5.0e-10 68.2 67 53.7
Aqoxy3G03839 Aquilegia oxysepala HOM05D007960 ORTHO05D010026 6.5e-10 67.8 81 51.9
BcaC08g46805 Brassica carinata HOM05D007960 ORTHO05D010026 6.5e-10 67.8 81 51.9
BolC6t39852H Brassica oleracea HOM05D007960 ORTHO05D010026 6.5e-10 67.8 81 51.9
BcaC08g46834 Brassica carinata HOM05D007960 ORTHO05D010026 1.1e-09 67.0 81 51.9
A07p39920 Brassica napus HOM05D007960 ORTHO05D010026 1.1e-09 67.0 81 51.9
BraA07t31538Z Brassica rapa HOM05D007960 ORTHO05D010026 1.1e-09 67.0 81 51.9
Ca_02635_v3 Cicer arietinum L. HOM05D007960 ORTHO05D010026 1.1e-09 67.0 59 57.6
Ca_30215_v3 Cicer arietinum L. HOM05D007960 ORTHO05D010026 1.1e-09 67.0 59 57.6
Sc04g0003950 Simmondsia chinensis HOM05D007960 ORTHO05D010026 1.1e-09 67.0 117 35.9
Gohir.D03G100500 Gossypium hirsutum HOM05D007960 ORTHO05D010026 1.4e-09 66.6 81 46.9
Gorai.003G106000 Gossypium raimondii HOM05D007960 ORTHO05D010026 1.4e-09 66.6 81 46.9
Lalb_Chr12g0197501 Lupinus albus HOM05D007960 ORTHO05D010026 1.4e-09 66.6 55 65.5
C06p48150 Brassica napus HOM05D007960 ORTHO05D010026 2.5e-09 65.9 81 50.6
Manes.01G022400 Manihot esculenta HOM05D007960 ORTHO05D010026 2.5e-09 65.9 96 40.6
AT1G74055 Arabidopsis thaliana HOM05D007960 ORTHO05D010026 7.2e-09 64.3 119 38.7
Carub.0002s2086 Capsella rubella HOM05D007960 ORTHO05D010026 7.2e-09 64.3 77 51.9
Thhalv10019432m.g Eutrema salsugineum HOM05D007960 ORTHO05D010026 9.4e-09 63.9 121 40.5
Prupe.5G214000 Prunus persica HOM05D007960 ORTHO05D010026 1.2e-08 63.5 97 44.3
CARHR067210 Cardamine hirsuta HOM05D007960 ORTHO05D010026 2.7e-08 62.4 117 36.8
Aa31LG4G4360 Aethionema arabicum HOM05D007960 ORTHO05D010026 4.7e-08 61.6 118 39.0
ClCG04G011400 Citrullus lanatus HOM05D007960 ORTHO05D010026 7.9e-08 60.8 66 45.5
PSO063G1775 Papaver somniferum HOM05D007960 ORTHO05D010026 1.8e-07 59.7 92 37.0
Glyma.05G015600 Glycine max HOM05D007960 ORTHO05D010026 2.3e-07 59.3 47 57.4
PSO782G5681 Papaver somniferum HOM05D007960 ORTHO05D010026 3.0e-07 58.9 81 38.3
ATR0730G198 Amborella trichopoda HOM05D007960 ORTHO05D010026 5.1e-07 58.2 75 41.3
Sed0018526 Sechium edule HOM05D007960 ORTHO05D010026 8.8e-07 57.4 82 45.1
BraA07t30596Z Brassica rapa HOM05D007960 ORTHO05D010026 5.7e-06 54.7 68 48.5


User provided reference genes

Program Settings