Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004339g0100 Nicotiana tabacum HOM05D000228 ORTHO05D002228 3.6e-58 228.0 113 100.0
PGSC0003DMG400008002 Solanum tuberosum HOM05D000228 ORTHO05D002228 1.9e-35 152.5 104 73.1
Sopen04g032080 Solanum pennellii HOM05D000228 ORTHO05D002228 9.5e-35 150.2 104 73.1
Solyc04g078480.3 Solanum lycopersicum HOM05D000228 ORTHO05D002228 1.4e-33 146.4 104 72.1
CAN.G1812.2 Capsicum annuum HOM05D000228 ORTHO05D002228 5.7e-32 141.0 105 70.5
CSS0007103 Camellia sinensis var. sinensis HOM05D000228 ORTHO05D002228 4.0e-25 118.2 106 59.4
Actinidia22658 Actinidia chinensis HOM05D000228 ORTHO05D002228 4.1e-22 108.2 105 54.3
Ciclev10002565m.g Citrus clementina HOM05D000228 ORTHO05D002228 2.7e-21 105.5 106 53.8
GSVIVG01009433001 Vitis vinifera HOM05D000228 ORTHO05D002228 3.0e-20 102.1 104 53.8
FvH4_2g33750 Fragaria vesca HOM05D000228 ORTHO05D002228 3.3e-19 98.6 104 48.1
FAN24G2767 Fragaria x ananassa HOM05D000228 ORTHO05D002228 4.3e-19 98.2 104 48.1
Dinv35925 Davidia involucrata HOM05D000228 ORTHO05D002228 9.5e-19 97.1 104 51.0
Haze_18073 Corylus avellana HOM05D000228 ORTHO05D002228 2.1e-18 95.9 104 46.2
CsaV3_4G034700 Cucumis sativus L. HOM05D000228 ORTHO05D002228 2.8e-18 95.5 104 50.0
Rhsim06G0055000 Rhododendron simsii HOM05D000228 ORTHO05D002228 2.8e-18 95.5 107 52.3
Atru.chr13.751 Acer truncatum HOM05D000228 ORTHO05D002228 1.8e-17 92.8 104 48.1
Cfa018055 Carpinus fangiana HOM05D000228 ORTHO05D002228 2.3e-17 92.4 104 46.2
ClCG05G020220 Citrullus lanatus HOM05D000228 ORTHO05D002228 2.3e-17 92.4 103 50.5
Manes.05G177300 Manihot esculenta HOM05D000228 ORTHO05D002228 3.1e-17 92.0 104 49.0
TAR376G0065 Trochodendron aralioides HOM05D000228 ORTHO05D002228 4.0e-17 91.7 108 50.0
MD15G1077200 Malus domestica HOM05D000228 ORTHO05D002228 5.2e-17 91.3 107 46.7
MELO3C016785.2 Cucumis melo HOM05D000228 ORTHO05D002228 1.5e-16 89.7 102 48.0
MD08G1093500 Malus domestica HOM05D000228 ORTHO05D002228 1.5e-16 89.7 102 49.0
Duzib041G0060 Durio zibethinus HOM05D000228 ORTHO05D002228 2.0e-16 89.4 93 53.8
PGR031G1232 Punica granatum HOM05D000228 ORTHO05D002228 2.0e-16 89.4 109 45.0
Cpa.g.sc21.153 Carica papaya HOM05D000003 ORTHO05D000004 3.4e-16 88.6 106 48.1
Hma1.2p1_0360F.1_g135920 Hydrangea macrophylla HOM05D000228 ORTHO05D002228 3.4e-16 88.6 103 47.6
Hma1.2p1_0360F.1_g135925 Hydrangea macrophylla HOM05D000228 ORTHO05D002228 3.4e-16 88.6 103 47.6
Hma1.2p1_1473F.1_g285730 Hydrangea macrophylla HOM05D000228 ORTHO05D002228 3.4e-16 88.6 103 47.6
Migut.C00531 Erythranthe guttata HOM05D000228 ORTHO05D002228 4.4e-16 88.2 114 44.7
CANSAT25G3330 Cannabis sativa HOM05D000228 ORTHO05D002228 7.5e-16 87.4 106 47.2
Gorai.005G101200 Gossypium raimondii HOM05D000228 ORTHO05D002228 7.5e-16 87.4 104 47.1
Thecc.08G001100 Theobroma cacao HOM05D000228 ORTHO05D002228 7.5e-16 87.4 105 47.6
Duzib093G1053 Durio zibethinus HOM05D000228 ORTHO05D002228 9.8e-16 87.0 105 48.6
Nn5g30398 Nelumbo nucifera HOM05D000228 ORTHO05D002228 9.8e-16 87.0 104 45.2
Oeu044857.1 Olea europaea HOM05D000228 ORTHO05D002228 9.8e-16 87.0 104 50.0
PSO210G7831 Papaver somniferum HOM05D000228 ORTHO05D002228 1.7e-15 86.3 110 44.5
MSTRG.25069 Avicennia marina HOM05D000228 ORTHO05D002228 2.9e-15 85.5 106 45.3
Eucgr.F02303 Eucalyptus grandis HOM05D000228 ORTHO05D002228 2.9e-15 85.5 115 40.9
RcHm_v2.0_Chr6g0308801 Rosa chinensis HOM05D000228 ORTHO05D002228 2.9e-15 85.5 106 40.6
EL10As7g23785 Beta vulgaris HOM05D000228 ORTHO05D002228 6.4e-15 84.3 106 48.1
Gohir.A02G082400 Gossypium hirsutum HOM05D000228 ORTHO05D002228 6.4e-15 84.3 104 46.2
AUR62041663 Chenopodium quinoa HOM05D000228 ORTHO05D002228 1.4e-14 83.2 109 48.6
AUR62043031 Chenopodium quinoa HOM05D000228 ORTHO05D002228 1.4e-14 83.2 109 49.5
SalBow7G0925 Salvia bowleyana HOM05D000228 ORTHO05D002228 2.4e-14 82.4 107 48.6
Cc10_g04880 Coffea canephora HOM05D000228 ORTHO05D002228 4.1e-14 81.6 109 52.3
FAN27G2591 Fragaria x ananassa HOM05D000228 ORTHO05D002228 4.1e-14 81.6 100 46.0
PSO170G1549 Papaver somniferum HOM05D000228 ORTHO05D002228 5.4e-14 81.3 108 41.7
FAN15G0998 Fragaria x ananassa HOM05D000228 ORTHO05D002228 7.0e-14 80.9 104 44.2
TWI56G1010 Tripterygium wilfordii HOM05D000228 ORTHO05D002228 9.2e-14 80.5 105 46.7
Lalb_Chr23g0267281 Lupinus albus HOM05D000228 ORTHO05D002228 1.2e-13 80.1 107 45.8
QL01p015188 Quercus lobata HOM05D004258 ORTHO05D002228 1.2e-13 80.1 116 42.2
QL02p003915 Quercus lobata HOM05D000228 ORTHO05D002228 1.2e-13 80.1 116 42.2
Oeu054784.1 Olea europaea HOM05D000228 ORTHO05D002228 1.6e-13 79.7 106 50.9
Prupe.1G430600 Prunus persica HOM05D000228 ORTHO05D002228 2.0e-13 79.3 105 43.8
Sc02g0007540 Simmondsia chinensis HOM05D000228 ORTHO05D002228 2.7e-13 79.0 107 44.9
COL.COLO4_10115 Corchorus olitorius HOM05D000228 ORTHO05D002228 6.0e-13 77.8 106 44.3
Gohir.A05G205800 Gossypium hirsutum HOM05D000228 ORTHO05D002228 6.0e-13 77.8 104 42.3
Lj4A765G44 Lonicera japonica HOM05D000228 ORTHO05D002228 6.0e-13 77.8 104 44.2
CiPaw.16G037700 Carya illinoinensis HOM05D000228 ORTHO05D002228 7.8e-13 77.4 104 41.3
Gorai.009G215500 Gossypium raimondii HOM05D000228 ORTHO05D002228 7.8e-13 77.4 104 43.3
MD08G1093000 Malus domestica HOM05D000228 ORTHO05D002228 7.8e-13 77.4 47 70.2
CiPaw.15G052000 Carya illinoinensis HOM05D000228 ORTHO05D002228 1.0e-12 77.0 109 44.0
Gohir.D05G209100 Gossypium hirsutum HOM05D000228 ORTHO05D002228 2.3e-12 75.9 104 42.3
Manes.18G041500 Manihot esculenta HOM05D000228 ORTHO05D002228 3.9e-12 75.1 106 45.3
Oeu048946.1 Olea europaea HOM05D000228 ORTHO05D002228 3.9e-12 75.1 111 45.9
Potri.014G023400 Populus trichocarpa HOM05D000228 ORTHO05D002228 3.9e-12 75.1 106 46.2
Carub.0005s1290 Capsella rubella HOM05D000228 ORTHO05D002228 6.6e-12 74.3 112 44.6
FAN20G0088 Fragaria x ananassa HOM05D000228 ORTHO05D002228 6.6e-12 74.3 106 42.5
HanXRQChr09g0267101 Helianthus annuus HOM05D000228 ORTHO05D002228 6.6e-12 74.3 116 44.8
Peaxi162Scf11003g00017 Petunia axillaris HOM05D000228 ORTHO05D002228 1.1e-11 73.6 70 64.3
SGA_v2.0_scaffold74G24695 Striga asiatica HOM05D000228 ORTHO05D002228 1.1e-11 73.6 112 42.9
CARHR155180 Cardamine hirsuta HOM05D000228 ORTHO05D002228 1.9e-11 72.8 112 43.8
Sed0009441 Sechium edule HOM05D000228 ORTHO05D002228 1.9e-11 72.8 104 43.3
unitig_46.g17916 Utricularia gibba HOM05D000228 ORTHO05D002228 1.9e-11 72.8 107 40.2
Aa31LG4G15640 Aethionema arabicum HOM05D000228 ORTHO05D002228 1.2e-10 70.1 109 44.0
Hund05330 Selenicereus undatus HOM05D000228 ORTHO05D002228 1.2e-10 70.1 112 46.4
Lsat_1_v5_gn_4_128040 Lactuca sativa HOM05D000228 ORTHO05D002228 1.6e-10 69.7 121 42.1
THA.LOC104820500 Tarenaya hassleriana HOM05D000228 ORTHO05D002228 1.6e-10 69.7 108 39.8
Sp5g15050 Schrenkiella parvula HOM05D000228 ORTHO05D002228 2.8e-10 68.9 109 42.2
Thhalv10002669m.g Eutrema salsugineum HOM05D000228 ORTHO05D002228 4.7e-10 68.2 109 42.2
Sed0024824 Sechium edule HOM05D000228 ORTHO05D002228 4.7e-10 68.2 47 61.7
AL5G25520 Arabidopsis lyrata HOM05D000228 ORTHO05D002228 8.1e-10 67.4 112 42.0
Phvul.009G067500 Phaseolus vulgaris HOM05D000228 ORTHO05D002228 1.4e-09 66.6 111 39.6
HanXRQChr16g0508861 Helianthus annuus HOM05D000228 ORTHO05D002228 4.0e-09 65.1 71 47.9
TAR625G1311 Trochodendron aralioides HOM05D000228 ORTHO05D002228 4.0e-09 65.1 103 37.9
DCAR_012794 Daucus carota HOM05D000228 ORTHO05D002228 5.2e-09 64.7 106 41.5
AT3G46630 Arabidopsis thaliana HOM05D000228 ORTHO05D002228 6.8e-09 64.3 115 40.9
BcaB02g10715 Brassica carinata HOM05D000228 ORTHO05D002228 6.8e-09 64.3 108 41.7
CDE07G0926 Ceratophyllum demersum HOM05D000228 ORTHO05D002228 8.9e-09 63.9 108 39.8
Lj1g0000098 Lotus japonicus HOM05D000228 ORTHO05D002228 8.9e-09 63.9 105 41.0
VMungo1309G3016 Vigna mungo HOM05D000228 ORTHO05D002228 1.2e-08 63.5 119 37.0
Lalb_Chr14g0368461 Lupinus albus HOM05D000228 ORTHO05D002228 5.8e-08 61.2 112 38.4
HPP92_008275 Vanilla planifolia HOM05D000228 ORTHO05D002228 1.3e-07 60.1 117 37.6
BcaC01g02256 Brassica carinata HOM05D000228 ORTHO05D002228 1.7e-07 59.7 108 39.8
Glyma.04G041900 Glycine max HOM05D000228 ORTHO05D002228 2.2e-07 59.3 101 40.6
Lj1g0018084 Lotus japonicus HOM05D000228 ORTHO05D002228 2.2e-07 59.3 107 40.2
BraA06t25644Z Brassica rapa HOM05D000228 ORTHO05D002228 2.9e-07 58.9 36 72.2
Medtr3g102270 Medicago truncatula HOM05D000228 ORTHO05D002228 4.9e-07 58.2 110 38.2
THA.LOC104814176 Tarenaya hassleriana HOM05D000228 ORTHO05D002228 4.9e-07 58.2 109 36.7
BNapus_Darmor_BZH_scaffold_82p00050 Brassica napus HOM05D000228 ORTHO05D002228 6.4e-07 57.8 107 39.3
BolC3t19014H Brassica oleracea HOM05D000228 ORTHO05D002228 6.4e-07 57.8 107 39.3
CDE04G0164 Ceratophyllum demersum HOM05D000228 ORTHO05D002228 6.4e-07 57.8 106 37.7
Psat5g041840 Pisum sativum HOM05D000228 ORTHO05D002228 6.4e-07 57.8 111 38.7
A06p27060 Brassica napus HOM05D000228 ORTHO05D002228 1.1e-06 57.0 35 71.4
Ca_15933_v3 Cicer arietinum L. HOM05D000228 ORTHO05D002228 3.2e-06 55.5 42 59.5
AUR62041662 Chenopodium quinoa HOM05D000228 ORTHO05D002228 4.1e-06 55.1 106 35.8
Aqoxy6G02893 Aquilegia oxysepala HOM05D000228 ORTHO05D002228 7.1e-06 54.3 48 54.2
ECA232G1882 Erigeron canadensis HOM05D000228 ORTHO05D002228 7.1e-06 54.3 125 34.4


User provided reference genes

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