Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004338g0130 Nicotiana tabacum HOM05D007113 ORTHO05D008859 8.7e-61 236.9 128 100.0
PGSC0003DMG400027129 Solanum tuberosum HOM05D007113 ORTHO05D008859 3.3e-36 155.2 118 76.3
Peaxi162Scf00957g00229 Petunia axillaris HOM05D011221 ORTHO05D013370 4.3e-36 154.8 110 80.0
Sopen05g031230 Solanum pennellii HOM05D007113 ORTHO05D008859 9.7e-36 153.7 118 75.4
Solyc05g052710.3 Solanum lycopersicum HOM05D007113 ORTHO05D008859 1.1e-34 150.2 118 72.9
Nitab4.5_0000802g0080 Nicotiana tabacum HOM05D007113 ORTHO05D008859 1.4e-34 149.8 117 73.5
Nitab4.5_0008493g0040 Nicotiana tabacum HOM05D007113 ORTHO05D008859 3.4e-33 145.2 117 70.1
CAN.G503.7 Capsicum annuum HOM05D007113 ORTHO05D008859 2.5e-31 139.0 116 70.7
Dinv34405 Davidia involucrata HOM05D007113 ORTHO05D008859 2.6e-28 129.0 116 66.4
Eucgr.K02991 Eucalyptus grandis HOM05D007113 ORTHO05D008859 4.4e-28 128.3 122 63.1
PGR004G1045 Punica granatum HOM05D007113 ORTHO05D008859 1.3e-27 126.7 116 60.3
Oeu028599.1 Olea europaea HOM05D007113 ORTHO05D008859 1.7e-27 126.3 116 64.7
Lsat_1_v5_gn_2_121221 Lactuca sativa HOM05D007113 ORTHO05D008859 2.2e-27 125.9 95 71.6
CSS0048161 Camellia sinensis var. sinensis HOM05D007113 ORTHO05D008859 6.3e-27 124.4 120 64.2
Migut.F01372 Erythranthe guttata HOM05D007113 ORTHO05D008859 1.1e-26 123.6 117 61.5
ECA238G3418 Erigeron canadensis HOM05D007113 ORTHO05D008859 1.8e-26 122.9 114 62.3
HanXRQChr14g0460151 Helianthus annuus HOM05D007113 ORTHO05D008859 1.8e-26 122.9 113 63.7
CDE03G0108 Ceratophyllum demersum HOM05D007113 ORTHO05D008859 4.1e-26 121.7 116 59.5
DCAR_028817 Daucus carota HOM05D007113 ORTHO05D008859 5.3e-26 121.3 116 62.9
Lsat_1_v5_gn_9_63261 Lactuca sativa HOM05D007113 ORTHO05D008859 7.0e-26 120.9 106 63.2
Nn8g40109 Nelumbo nucifera HOM05D007113 ORTHO05D008859 7.0e-26 120.9 120 59.2
ATR0618G049 Amborella trichopoda HOM05D007113 ORTHO05D008859 9.1e-26 120.6 112 62.5
SalBow6G1146 Salvia bowleyana HOM05D007113 ORTHO05D008859 1.2e-25 120.2 113 60.2
Atru.chr8.2216 Acer truncatum HOM05D007113 ORTHO05D008859 1.5e-25 119.8 112 62.5
Haze_20976 Corylus avellana HOM05D007113 ORTHO05D008859 1.5e-25 119.8 116 55.2
CDE04G2391 Ceratophyllum demersum HOM05D007113 ORTHO05D008859 2.6e-25 119.0 116 56.9
Cc02_g06720 Coffea canephora HOM05D007113 ORTHO05D008859 1.0e-24 117.1 118 58.5
THA.LOC104805827 Tarenaya hassleriana HOM05D007113 ORTHO05D008859 1.0e-24 117.1 123 52.0
Ciclev10013049m.g Citrus clementina HOM05D007113 ORTHO05D008859 1.3e-24 116.7 115 56.5
Sc11g0007190 Simmondsia chinensis HOM05D007113 ORTHO05D008859 1.3e-24 116.7 116 60.3
Hma1.2p1_0362F.1_g136060 Hydrangea macrophylla HOM05D007113 ORTHO05D008859 1.7e-24 116.3 115 55.7
MD04G1149600 Malus domestica HOM05D007113 ORTHO05D008859 1.7e-24 116.3 116 56.9
TWI74G0516 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 2.2e-24 115.9 79 73.4
FAN09G0121 Fragaria x ananassa HOM05D007113 ORTHO05D008859 5.0e-24 114.8 116 56.0
FAN14G1367 Fragaria x ananassa HOM05D007113 ORTHO05D008859 6.5e-24 114.4 116 56.0
FAN05G2893 Fragaria x ananassa HOM05D007113 ORTHO05D008859 1.1e-23 113.6 116 56.0
FvH4_6g11730 Fragaria vesca HOM05D007113 ORTHO05D008859 1.5e-23 113.2 116 56.0
Gohir.D01G216000 Gossypium hirsutum HOM05D007113 ORTHO05D008859 1.9e-23 112.8 117 56.4
Gohir.A01G226400 Gossypium hirsutum HOM05D007113 ORTHO05D008859 4.2e-23 111.7 117 54.7
MD12G1164000 Malus domestica HOM05D007113 ORTHO05D008859 4.2e-23 111.7 116 55.2
PSO384G2929 Papaver somniferum HOM05D007113 ORTHO05D008859 5.5e-23 111.3 109 55.0
Gorai.002G262200 Gossypium raimondii HOM05D007113 ORTHO05D008859 7.2e-23 110.9 117 55.6
vmacro06980 Vaccinium macrocarpon HOM05D007113 ORTHO05D008859 7.2e-23 110.9 111 61.3
GSVIVG01033979001 Vitis vinifera HOM05D007113 ORTHO05D008859 1.6e-22 109.8 122 54.1
Thecc.05G019300 Theobroma cacao HOM05D007113 ORTHO05D008859 2.1e-22 109.4 117 55.6
unitig_62.g23930 Utricularia gibba HOM05D000230 ORTHO05D000176 2.1e-22 109.4 125 52.0
RcHm_v2.0_Chr3g0463511 Rosa chinensis HOM05D007113 ORTHO05D008859 2.7e-22 109.0 116 53.4
Aa31sc189G20 Aethionema arabicum HOM05D007113 ORTHO05D008859 3.6e-22 108.6 122 48.4
BraA05t19755Z Brassica rapa HOM05D007113 ORTHO05D008859 6.1e-22 107.8 117 54.7
PSO339G1456 Papaver somniferum HOM05D007113 ORTHO05D008859 6.1e-22 107.8 109 54.1
TWI77G0060 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 6.1e-22 107.8 116 56.0
arahy.Tifrunner.gnm1.ann1.J29A80 Arachis hypogaea HOM05D007113 ORTHO05D008859 8.0e-22 107.5 126 51.6
Glyma.03G063200 Glycine max HOM05D007113 ORTHO05D008859 8.0e-22 107.5 117 53.8
A05p07890 Brassica napus HOM05D007113 ORTHO05D008859 1.4e-21 106.7 115 51.3
C04p09540 Brassica napus HOM05D007113 ORTHO05D008859 1.4e-21 106.7 114 51.8
BolC4t22560H Brassica oleracea HOM05D007113 ORTHO05D008859 1.4e-21 106.7 114 51.8
Potri.016G113700 Populus trichocarpa HOM05D007113 ORTHO05D008859 1.8e-21 106.3 113 54.9
Hund23901 Selenicereus undatus HOM05D007113 ORTHO05D008859 1.8e-21 106.3 105 61.0
Lj3g0022517 Lotus japonicus HOM05D007113 ORTHO05D008859 2.3e-21 105.9 117 50.4
Phvul.010G003200 Phaseolus vulgaris HOM05D007113 ORTHO05D008859 2.3e-21 105.9 120 51.7
Manes.08G090600 Manihot esculenta HOM05D007113 ORTHO05D008859 3.0e-21 105.5 65 75.4
Phvul.004G171400 Phaseolus vulgaris HOM05D007113 ORTHO05D008859 3.0e-21 105.5 117 53.8
VMungo1127G1807 Vigna mungo HOM05D007113 ORTHO05D008859 3.0e-21 105.5 118 54.2
Aqoxy4G02617 Aquilegia oxysepala HOM05D007113 ORTHO05D008859 5.2e-21 104.8 112 51.8
CANSAT35G0395 Cannabis sativa HOM05D007113 ORTHO05D008859 5.2e-21 104.8 118 52.5
COL.COLO4_14561 Corchorus olitorius HOM05D007113 ORTHO05D008859 6.7e-21 104.4 119 54.6
CARHR132730 Cardamine hirsuta HOM05D007113 ORTHO05D008859 8.8e-21 104.0 115 52.2
ClCG04G007070 Citrullus lanatus HOM05D007113 ORTHO05D008859 8.8e-21 104.0 95 56.8
CsaV3_4G026180 Cucumis sativus L. HOM05D007113 ORTHO05D008859 8.8e-21 104.0 96 56.2
arahy.Tifrunner.gnm1.ann1.62SCQ6 Arachis hypogaea HOM05D007113 ORTHO05D008859 1.1e-20 103.6 62 79.0
MELO3C003245.2 Cucumis melo HOM05D007113 ORTHO05D008859 1.5e-20 103.2 96 55.2
Lalb_Chr07g0193491 Lupinus albus HOM05D007113 ORTHO05D008859 1.5e-20 103.2 64 73.4
Lsat_1_v5_gn_9_63281 Lactuca sativa HOM05D005832 ORTHO05D007117 2.6e-20 102.4 98 57.1
HPP92_019871 Vanilla planifolia HOM05D007113 ORTHO05D008859 2.6e-20 102.4 96 54.2
AT2G38140 Arabidopsis thaliana HOM05D007113 ORTHO05D008859 3.3e-20 102.1 114 51.8
Glyma.01G114800 Glycine max HOM05D007113 ORTHO05D008859 3.3e-20 102.1 96 57.3
Medtr4g015540 Medicago truncatula HOM05D007113 ORTHO05D008859 3.3e-20 102.1 119 51.3
Duzib093G1147 Durio zibethinus HOM05D007113 ORTHO05D008859 4.4e-20 101.7 117 51.3
TAR623G1648 Trochodendron aralioides HOM05D007113 ORTHO05D008859 7.4e-20 100.9 104 62.5
EL10Ac2g04810 Beta vulgaris HOM05D007113 ORTHO05D008859 9.7e-20 100.5 103 60.2
Haze_17209 Corylus avellana HOM05D007113 ORTHO05D008859 2.2e-19 99.4 101 57.4
FAN02G3283 Fragaria x ananassa HOM05D008730 ORTHO05D008859 3.7e-19 98.6 112 50.9
SGA_v2.0_scaffold78G25464 Striga asiatica HOM05D007113 ORTHO05D008859 6.3e-19 97.8 110 53.6
Oeu025646.1 Olea europaea HOM05D007113 ORTHO05D008859 8.2e-19 97.4 55 78.2
CiPaw.10G155700 Carya illinoinensis HOM05D007113 ORTHO05D008859 1.8e-18 96.3 117 50.4
Rhsim03G0141800 Rhododendron simsii HOM05D007113 ORTHO05D008859 3.1e-18 95.5 139 48.2
Sed0004762 Sechium edule HOM05D007113 ORTHO05D008859 3.1e-18 95.5 94 52.1
Zm00001eb144250 Zea mays HOM05D007113 ORTHO05D008859 3.1e-18 95.5 119 45.4
Cfa017230 Carpinus fangiana HOM05D007113 ORTHO05D008859 4.1e-18 95.1 116 47.4
Actinidia29691 Actinidia chinensis HOM05D007113 ORTHO05D008859 7.0e-18 94.4 113 51.3
FAN14G0869 Fragaria x ananassa HOM05D008730 ORTHO05D010922 9.1e-18 94.0 112 49.1
Ah.16g103370 Amaranthus hybridus HOM05D007113 ORTHO05D008859 1.2e-17 93.6 98 57.1
SGA_v2.0_scaffold20G09268 Striga asiatica HOM05D007113 ORTHO05D008859 2.0e-17 92.8 54 75.9
TWI53G1153 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 2.6e-17 92.4 61 73.8
Os05g0186000 Oryza sativa ssp. japonica HOM05D007113 ORTHO05D008859 3.5e-17 92.0 91 54.9
Psat7g246120 Pisum sativum HOM05D007113 ORTHO05D008859 2.9e-16 89.0 123 47.2
SEGI_38672 Sequoiadendron giganteum HOM05D007113 ORTHO05D008859 2.9e-16 89.0 90 55.6
TPR.G13351 Trifolium pratense HOM05D007113 ORTHO05D008859 2.9e-16 89.0 59 66.1
SEGI_10938 Sequoiadendron giganteum HOM05D007113 ORTHO05D008859 6.5e-16 87.8 90 54.4
QL08p062975 Quercus lobata HOM05D007113 ORTHO05D008859 5.5e-15 84.7 86 59.3
Ca_20298_v3 Cicer arietinum L. HOM05D007113 ORTHO05D008859 1.2e-14 83.6 107 48.6
arahy.Tifrunner.gnm1.ann1.C0BXE8 Arachis hypogaea HOM05D007113 ORTHO05D008859 4.7e-14 81.6 101 47.5
Sp4g20460 Schrenkiella parvula HOM05D007113 ORTHO05D008859 2.3e-13 79.3 119 42.0
Mapoly0005s0194 Marchantia polymorpha HOM05D007113 ORTHO05D008859 3.0e-13 79.0 116 41.4
Thhalv10017376m.g Eutrema salsugineum HOM05D007113 ORTHO05D008859 4.0e-13 78.6 121 44.6
arahy.Tifrunner.gnm1.ann1.CDY6H8 Arachis hypogaea HOM05D007113 ORTHO05D008859 8.8e-13 77.4 101 46.5
Carub.0004s2011 Capsella rubella HOM05D007113 ORTHO05D008859 1.3e-11 73.6 115 42.6
AagrBONN_evm.TU.Sc2ySwM_362.1890 Anthoceros agrestis HOM05D007113 ORTHO05D008859 4.8e-11 71.6 112 39.3
AL4G35140 Arabidopsis lyrata HOM05D007113 ORTHO05D008859 6.3e-11 71.2 114 39.5
Peaxi162Scf01313g00026 Petunia axillaris HOM05D007113 ORTHO05D008859 1.0e-08 63.9 31 96.8
Sabra16G0109100 Salix brachista HOM05D007113 ORTHO05D008859 6.5e-08 61.2 113 46.9
Pp3c15_12810 Physcomitrium patens HOM05D007113 ORTHO05D008859 1.9e-07 59.7 66 48.5
Pp3c9_12290 Physcomitrium patens HOM05D007113 ORTHO05D008859 4.2e-07 58.5 112 38.4


User provided reference genes

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