Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004336g0030 Nicotiana tabacum HOM05D006458 ORTHO05D008433 2.1e-82 308.9 146 100.0
Nitab4.5_0001604g0080 Nicotiana tabacum HOM05D006458 ORTHO05D008433 1.2e-77 293.1 145 94.5
Peaxi162Scf00450g00732 Petunia axillaris HOM05D006458 ORTHO05D008433 3.1e-70 268.5 147 85.7
PGSC0003DMG400001097 Solanum tuberosum HOM05D006458 ORTHO05D008433 1.6e-63 246.1 147 79.6
Solyc12g005150.2 Solanum lycopersicum HOM05D006458 ORTHO05D008433 4.8e-63 244.6 147 78.9
CiPaw.12G128400 Carya illinoinensis HOM05D006458 ORTHO05D008433 1.1e-62 243.4 148 77.7
CSS0025826 Camellia sinensis var. sinensis HOM05D006458 ORTHO05D008433 1.4e-62 243.0 131 84.7
Dinv22275 Davidia involucrata HOM05D006458 ORTHO05D008433 1.4e-62 243.0 147 77.6
Sopen12g001140 Solanum pennellii HOM05D006458 ORTHO05D008433 1.4e-62 243.0 147 78.9
Manes.03G125000 Manihot esculenta HOM05D006458 ORTHO05D008433 1.8e-62 242.7 145 75.9
Nitab4.5_0000749g0130 Nicotiana tabacum HOM05D006458 ORTHO05D008433 4.0e-62 241.5 149 76.5
Lj1A870G91 Lonicera japonica HOM05D006458 ORTHO05D008433 6.9e-62 240.7 147 75.5
Nitab4.5_0000653g0030 Nicotiana tabacum HOM05D006458 ORTHO05D008433 6.9e-62 240.7 149 75.8
CAN.G416.46 Capsicum annuum HOM05D006458 ORTHO05D008433 9.0e-62 240.4 147 78.2
Cfa020375 Carpinus fangiana HOM05D006458 ORTHO05D008433 9.0e-62 240.4 147 76.2
Gorai.013G160500 Gossypium raimondii HOM05D006458 ORTHO05D008433 1.2e-61 240.0 147 74.8
QL08p011516 Quercus lobata HOM05D006458 ORTHO05D008433 1.5e-61 239.6 145 75.9
Gohir.A13G138900 Gossypium hirsutum HOM05D006458 ORTHO05D008433 3.4e-61 238.4 147 74.1
Hma1.2p1_0673F.1_g201190 Hydrangea macrophylla HOM05D006458 ORTHO05D008433 3.4e-61 238.4 148 75.7
Thecc.07G043100 Theobroma cacao HOM05D006458 ORTHO05D008433 3.4e-61 238.4 147 76.9
MD11G1221600 Malus domestica HOM05D006458 ORTHO05D008433 4.5e-61 238.0 149 75.8
Migut.M01780 Erythranthe guttata HOM05D006458 ORTHO05D008433 5.8e-61 237.7 145 76.6
MSTRG.15157 Avicennia marina HOM05D006458 ORTHO05D008433 9.9e-61 236.9 147 73.5
CANSAT11G2101 Cannabis sativa HOM05D006458 ORTHO05D008433 9.9e-61 236.9 138 79.0
Duzib170G0083 Durio zibethinus HOM05D006458 ORTHO05D008433 9.9e-61 236.9 147 74.8
Duzib170G1029 Durio zibethinus HOM05D006458 ORTHO05D008433 9.9e-61 236.9 147 74.8
Prupe.4G210000 Prunus persica HOM05D006458 ORTHO05D008433 9.9e-61 236.9 150 76.7
SalBow5G1944 Salvia bowleyana HOM05D006458 ORTHO05D008433 1.7e-60 236.1 146 74.7
CSS0046732 Camellia sinensis var. sinensis HOM05D006458 ORTHO05D008433 2.2e-60 235.7 126 84.9
SGA_v2.0_scaffold7G03986 Striga asiatica HOM05D006458 ORTHO05D008433 2.2e-60 235.7 150 72.0
TWI39G1057 Tripterygium wilfordii HOM05D006458 ORTHO05D008433 2.2e-60 235.7 146 73.3
FAN11G3779 Fragaria x ananassa HOM05D006458 ORTHO05D008433 2.9e-60 235.3 145 73.1
Ciclev10009738m.g Citrus clementina HOM05D006458 ORTHO05D008433 4.9e-60 234.6 150 73.3
Cc05_g13560 Coffea canephora HOM05D006458 ORTHO05D008433 6.4e-60 234.2 150 74.7
Sed0021211 Sechium edule HOM05D006458 ORTHO05D008433 6.4e-60 234.2 141 76.6
CsaV3_3G005240 Cucumis sativus L. HOM05D006458 ORTHO05D008433 8.4e-60 233.8 146 74.0
arahy.Tifrunner.gnm1.ann1.717SVK Arachis hypogaea HOM05D006458 ORTHO05D008433 1.1e-59 233.4 146 74.7
FvH4_3g22360 Fragaria vesca HOM05D006458 ORTHO05D008433 1.1e-59 233.4 145 72.4
Glyma.18G099800 Glycine max HOM05D006458 ORTHO05D008433 1.1e-59 233.4 143 74.8
Lj6g0005932 Lotus japonicus HOM05D006458 ORTHO05D008433 1.1e-59 233.4 146 74.7
ClCG10G005510 Citrullus lanatus HOM05D006458 ORTHO05D008433 1.4e-59 233.0 146 74.7
Duzib170G0736 Durio zibethinus HOM05D006458 ORTHO05D008433 1.4e-59 233.0 147 73.5
Dinv40738 Davidia involucrata HOM05D000653 ORTHO05D008581 2.4e-59 232.3 138 77.5
Potri.011G137100 Populus trichocarpa HOM05D006458 ORTHO05D008433 2.4e-59 232.3 147 75.5
Gohir.D13G143700 Gossypium hirsutum HOM05D006458 ORTHO05D008433 3.2e-59 231.9 147 72.8
GSVIVG01037612001 Vitis vinifera HOM05D006458 ORTHO05D008433 3.2e-59 231.9 125 82.4
arahy.Tifrunner.gnm1.ann1.JDXG8H Arachis hypogaea HOM05D006458 ORTHO05D008433 5.4e-59 231.1 146 74.0
Glyma.08G314400 Glycine max HOM05D006458 ORTHO05D008433 5.4e-59 231.1 143 74.8
HanXRQChr11g0336301 Helianthus annuus HOM05D006458 ORTHO05D008433 5.4e-59 231.1 136 79.4
COL.COLO4_09642 Corchorus olitorius HOM05D000451 ORTHO05D008433 7.1e-59 230.7 126 82.5
Ca_14717_v3 Cicer arietinum L. HOM05D006458 ORTHO05D008433 1.2e-58 229.9 148 73.6
FAN21G0544 Fragaria x ananassa HOM05D006458 ORTHO05D008433 1.6e-58 229.6 145 72.4
MD03G1206100 Malus domestica HOM05D006458 ORTHO05D008433 1.6e-58 229.6 139 77.0
Actinidia05107 Actinidia chinensis HOM05D006458 ORTHO05D008433 2.7e-58 228.8 122 85.2
Haze_09655 Corylus avellana HOM05D000653 ORTHO05D008581 2.7e-58 228.8 140 76.4
Hma1.2p1_1271F.1_g271730 Hydrangea macrophylla HOM05D006458 ORTHO05D008433 2.7e-58 228.8 131 79.4
Cpa.g.sc97.30 Carica papaya HOM05D006458 ORTHO05D008433 3.5e-58 228.4 147 74.8
Gorai.002G087500 Gossypium raimondii HOM05D006458 ORTHO05D008433 3.5e-58 228.4 145 70.3
Gohir.D01G065600 Gossypium hirsutum HOM05D006458 ORTHO05D008433 4.6e-58 228.0 145 70.3
Lalb_Chr15g0081001 Lupinus albus HOM05D006458 ORTHO05D008433 7.9e-58 227.3 147 72.8
Lsat_1_v5_gn_7_109420 Lactuca sativa HOM05D006458 ORTHO05D008433 1.8e-57 226.1 123 83.7
Phvul.006G040400 Phaseolus vulgaris HOM05D006458 ORTHO05D008433 1.8e-57 226.1 134 76.9
Gohir.A01G078500 Gossypium hirsutum HOM05D006458 ORTHO05D008433 3.9e-57 224.9 137 72.3
Medtr3g051110 Medicago truncatula HOM05D006458 ORTHO05D008433 6.7e-57 224.2 148 70.9
Psat5g192520 Pisum sativum HOM05D006458 ORTHO05D008433 6.7e-57 224.2 134 74.6
Sabra16G0288000 Salix brachista HOM05D006458 ORTHO05D008433 8.7e-57 223.8 147 72.1
VMungo0540G0475 Vigna mungo HOM05D006458 ORTHO05D008433 8.7e-57 223.8 143 73.4
DCAR_010044 Daucus carota HOM05D006458 ORTHO05D008433 1.5e-56 223.0 129 78.3
Phvul.005G120100 Phaseolus vulgaris HOM05D006458 ORTHO05D008433 1.9e-56 222.6 130 77.7
RcHm_v2.0_Chr5g0038891 Rosa chinensis HOM05D006458 ORTHO05D008433 3.3e-56 221.9 145 70.3
TAR629G1817 Trochodendron aralioides HOM05D006458 ORTHO05D008433 4.3e-56 221.5 129 79.1
TAR626G0847 Trochodendron aralioides HOM05D006458 ORTHO05D008433 1.3e-55 219.9 143 72.0
PSO541G1528 Papaver somniferum HOM05D006458 ORTHO05D008433 1.8e-54 216.1 143 69.9
Thhalv10014954m.g Eutrema salsugineum HOM05D006458 ORTHO05D008433 2.4e-54 215.7 145 69.0
PGR031G1917 Punica granatum HOM05D006458 ORTHO05D008433 3.1e-54 215.3 148 70.3
CDE05G1373 Ceratophyllum demersum HOM05D006458 ORTHO05D008433 5.3e-54 214.5 144 67.4
PSO675G3423 Papaver somniferum HOM05D006458 ORTHO05D008433 5.3e-54 214.5 143 69.9
vmacro09731 Vaccinium macrocarpon HOM05D006458 ORTHO05D008433 5.3e-54 214.5 176 60.2
SalBow7G4274 Salvia bowleyana HOM05D006458 ORTHO05D008433 6.9e-54 214.2 166 60.8
Aqoxy2G01543 Aquilegia oxysepala HOM05D006458 ORTHO05D008433 1.2e-53 213.4 145 67.6
AL8G30300 Arabidopsis lyrata HOM05D006458 ORTHO05D008433 3.4e-53 211.8 146 68.5
Sp6g16820 Schrenkiella parvula HOM05D006458 ORTHO05D008433 3.4e-53 211.8 146 67.8
AT5G54855 Arabidopsis thaliana HOM05D006458 ORTHO05D008433 4.5e-53 211.5 146 68.5
Sc03g0008720 Simmondsia chinensis HOM05D006458 ORTHO05D008433 4.5e-53 211.5 139 71.9
AUR62015736 Chenopodium quinoa HOM05D006458 ORTHO05D008433 9.9e-53 210.3 135 71.1
AUR62020475 Chenopodium quinoa HOM05D006458 ORTHO05D008433 9.9e-53 210.3 135 71.1
Carub.0008s1515 Capsella rubella HOM05D006458 ORTHO05D008433 1.3e-52 209.9 146 67.1
THA.LOC104817659 Tarenaya hassleriana HOM05D006458 ORTHO05D008433 2.9e-52 208.8 134 71.6
Zm00001eb178010 Zea mays HOM05D006458 ORTHO05D008433 2.9e-52 208.8 140 68.6
BcaB08g35852 Brassica carinata HOM05D006458 ORTHO05D008433 4.9e-52 208.0 146 66.4
EL10Ac4g07850 Beta vulgaris HOM05D006458 ORTHO05D008433 1.1e-51 206.8 134 70.9
BraA10t43315Z Brassica rapa HOM05D006458 ORTHO05D008433 1.1e-51 206.8 146 66.4
BcaC04g20291 Brassica carinata HOM05D006458 ORTHO05D008433 1.9e-51 206.1 130 72.3
Ah.04g165770 Amaranthus hybridus HOM05D006458 ORTHO05D008433 2.4e-51 205.7 138 68.8
Aa31LG3G10770 Aethionema arabicum HOM05D006458 ORTHO05D008433 4.2e-51 204.9 131 70.2
CARHR268190 Cardamine hirsuta HOM05D006458 ORTHO05D008433 4.2e-51 204.9 124 74.2
A10p12190 Brassica napus HOM05D006458 ORTHO05D008433 5.5e-51 204.5 146 65.8
ATR0752G141 Amborella trichopoda HOM05D006458 ORTHO05D008433 7.1e-51 204.1 132 66.7
Os02g0317800 Oryza sativa ssp. japonica HOM05D006458 ORTHO05D008433 1.2e-50 203.4 137 66.4
MBI18_g24806_MAGBIO Magnolia biondii HOM05D006458 ORTHO05D008433 1.6e-50 203.0 135 70.4
unitig_8.g4602 Utricularia gibba HOM05D006458 ORTHO05D008433 1.6e-50 203.0 137 67.2
C09p45410 Brassica napus HOM05D006458 ORTHO05D008433 2.7e-50 202.2 123 74.8
RhsimUnG0251700 Rhododendron simsii HOM05D006458 ORTHO05D008433 2.7e-50 202.2 208 51.4
Hund02079 Selenicereus undatus HOM05D006458 ORTHO05D008433 6.0e-50 201.1 136 67.6
CDE02G3449 Ceratophyllum demersum HOM05D006458 ORTHO05D008433 3.0e-49 198.7 129 70.5
CSS0035522 Camellia sinensis var. sinensis HOM05D006458 ORTHO05D008433 1.5e-48 196.4 109 84.4
Nn1g03576 Nelumbo nucifera HOM05D006458 ORTHO05D008433 2.5e-48 195.7 125 74.4
HPP92_005293 Vanilla planifolia HOM05D006458 ORTHO05D008433 1.1e-46 190.3 131 65.6
Sabra11G0123000 Salix brachista HOM05D006458 ORTHO05D008433 6.5e-44 181.0 163 58.3
Nitab4.5_0000296g0120 Nicotiana tabacum HOM05D006458 ORTHO05D008433 1.1e-43 180.3 97 85.6
ECA236G2465 Erigeron canadensis HOM05D000653 ORTHO05D008581 6.0e-42 174.5 96 82.3
MELO3C031911.2 Cucumis melo HOM05D006458 ORTHO05D008433 3.9e-41 171.8 101 79.2
Oeu062597.2 Olea europaea HOM05D006458 ORTHO05D008433 1.5e-40 169.9 94 81.9
Eucgr.F03456 Eucalyptus grandis HOM05D006458 ORTHO05D008433 6.3e-39 164.5 93 79.6
SalBow7G3069 Salvia bowleyana HOM05D006458 ORTHO05D008433 3.1e-38 162.2 96 76.0
Atru.chr2.3327 Acer truncatum HOM05D006458 ORTHO05D008433 2.5e-35 152.5 96 75.0
SEGI_29279 Sequoiadendron giganteum HOM05D006458 ORTHO05D008433 3.3e-32 142.1 120 61.7
AUR62029374 Chenopodium quinoa HOM05D001363 ORTHO05D006255 7.7e-21 104.4 110 54.5
Atru.chr2.3388 Acer truncatum HOM05D006458 ORTHO05D008433 2.6e-16 89.4 67 68.7
MD01G1183100 Malus domestica HOM05D005560 ORTHO05D006862 1.2e-13 80.5 43 79.1
TPR.G13209 Trifolium pratense HOM05D006458 ORTHO05D008433 1.6e-10 70.1 51 64.7
RcHm_v2.0_Chr5g0038871 Rosa chinensis HOM05D006458 ORTHO05D008433 3.0e-09 65.9 51 56.9
FAN25G2931 Fragaria x ananassa HOM05D006458 ORTHO05D008433 5.2e-09 65.1 35 88.6
MD13G1229600 Malus domestica HOM05D006458 ORTHO05D245398 2.8e-07 59.3 57 56.1
Nitab4.5_0000286g0120 Nicotiana tabacum HOM05D006458 ORTHO05D008433 1.8e-06 56.6 52 57.7
A06p35450 Brassica napus HOM05D006458 ORTHO05D041657 5.3e-06 55.1 30 80.0
BraA06t26468Z Brassica rapa HOM05D006458 ORTHO05D041657 5.3e-06 55.1 30 80.0


User provided reference genes

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