Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004323g0080 Nicotiana tabacum HOM05D003568 ORTHO05D004104 2.3e-304 1048.1 552 100.0
Nitab4.5_0010629g0020 Nicotiana tabacum HOM05D003568 ORTHO05D004104 1.1e-298 1029.2 548 98.5
Peaxi162Scf00154g00427 Petunia axillaris HOM05D003568 ORTHO05D004104 6.0e-276 953.7 579 87.7
CAN.G45.13 Capsicum annuum HOM05D003568 ORTHO05D004104 3.7e-265 917.9 552 90.0
Solyc11g050710.2 Solanum lycopersicum HOM05D003568 ORTHO05D004104 2.0e-247 859.0 582 81.3
Peaxi162Scf00073g02118 Petunia axillaris HOM05D003568 ORTHO05D004104 2.9e-246 855.1 562 80.2
PGSC0003DMG400005252 Solanum tuberosum HOM05D003568 ORTHO05D004104 6.5e-246 854.0 550 81.1
Nitab4.5_0000171g0380 Nicotiana tabacum HOM05D003568 ORTHO05D004104 7.2e-245 850.5 550 81.1
Sopen03g025390 Solanum pennellii HOM05D003568 ORTHO05D004104 3.0e-243 845.1 550 80.4
Solyc03g095410.3 Solanum lycopersicum HOM05D003568 ORTHO05D004104 3.9e-243 844.7 550 80.7
CAN.G165.6 Capsicum annuum HOM05D003568 ORTHO05D004104 6.7e-243 844.0 550 80.2
Cc08_g01740 Coffea canephora HOM05D003568 ORTHO05D004104 4.5e-239 831.2 551 78.9
Oeu015218.3 Olea europaea HOM05D003568 ORTHO05D004104 1.7e-238 829.3 554 78.7
Oeu036591.1 Olea europaea HOM05D003568 ORTHO05D004104 1.1e-237 826.6 554 78.5
MSTRG.27756 Avicennia marina HOM05D003568 ORTHO05D004104 2.1e-236 822.4 550 77.6
Dinv27398 Davidia involucrata HOM05D003568 ORTHO05D004104 2.7e-236 822.0 551 78.2
CSS0027239 Camellia sinensis var. sinensis HOM05D003568 ORTHO05D004104 3.9e-235 818.1 551 78.4
DCAR_006948 Daucus carota HOM05D003568 ORTHO05D004104 6.3e-233 810.8 550 77.1
Lj9A588G62 Lonicera japonica HOM05D003568 ORTHO05D004104 5.9e-231 804.3 551 76.6
vmacro13231 Vaccinium macrocarpon HOM05D003568 ORTHO05D004104 1.7e-230 802.7 551 76.8
Sopen11g021810 Solanum pennellii HOM05D003568 ORTHO05D004104 1.5e-229 799.7 553 79.7
SGA_v2.0_scaffold67G22717 Striga asiatica HOM05D003568 ORTHO05D004104 1.9e-229 799.3 551 76.4
Eucgr.E00099 Eucalyptus grandis HOM05D003568 ORTHO05D004104 1.6e-228 796.2 551 76.4
GSVIVG01026964001 Vitis vinifera HOM05D003568 ORTHO05D004104 2.1e-228 795.8 551 76.8
Prupe.2G177200 Prunus persica HOM05D003568 ORTHO05D004104 2.7e-228 795.4 551 76.2
HanXRQChr04g0120781 Helianthus annuus HOM05D003568 ORTHO05D004104 3.6e-228 795.0 548 75.7
Lsat_1_v5_gn_7_3960 Lactuca sativa HOM05D003568 ORTHO05D004104 3.6e-228 795.0 548 75.4
ECA236G4463 Erigeron canadensis HOM05D003568 ORTHO05D004104 3.0e-227 792.0 547 75.7
Sopen10g009070 Solanum pennellii HOM05D003568 ORTHO05D004104 3.3e-226 788.5 553 78.8
Potri.014G090100 Populus trichocarpa HOM05D003568 ORTHO05D004104 4.4e-226 788.1 551 76.0
Potri.002G164100 Populus trichocarpa HOM05D003568 ORTHO05D004104 9.7e-226 786.9 551 75.7
Migut.N01148 Erythranthe guttata HOM05D003568 ORTHO05D004104 1.7e-225 786.2 549 75.4
PGR042G3260 Punica granatum HOM05D003568 ORTHO05D004104 2.8e-225 785.4 549 75.6
RcHm_v2.0_Chr1g0357661 Rosa chinensis HOM05D003568 ORTHO05D004104 3.7e-225 785.0 551 75.5
CSS0021365 Camellia sinensis var. sinensis HOM05D003568 ORTHO05D004104 6.3e-225 784.3 551 75.3
CANSAT56G2290 Cannabis sativa HOM05D003568 ORTHO05D004104 1.4e-224 783.1 551 75.0
CSS0044044 Camellia sinensis var. sinensis HOM05D003568 ORTHO05D004104 2.4e-224 782.3 551 75.1
MD01G1071200 Malus domestica HOM05D003568 ORTHO05D004104 5.3e-224 781.2 551 75.5
THA.LOC104811828 Tarenaya hassleriana HOM05D003568 ORTHO05D004104 5.3e-224 781.2 551 73.7
Sed0000810 Sechium edule HOM05D003568 ORTHO05D004104 2.6e-223 778.9 551 74.8
Thecc.06G000300 Theobroma cacao HOM05D003568 ORTHO05D004104 2.6e-223 778.9 538 76.8
MELO3C006082.2 Cucumis melo HOM05D003568 ORTHO05D004104 3.5e-223 778.5 551 75.1
CsaV3_3G008620 Cucumis sativus L. HOM05D003568 ORTHO05D004104 4.5e-223 778.1 551 75.0
FAN03G0275 Fragaria x ananassa HOM05D003568 ORTHO05D004104 1.0e-222 776.9 551 75.0
Nn1g01682 Nelumbo nucifera HOM05D003568 ORTHO05D004104 1.0e-222 776.9 551 74.0
FvH4_7g15330 Fragaria vesca HOM05D003568 ORTHO05D004104 1.3e-222 776.5 551 75.0
MD07G1131500 Malus domestica HOM05D003568 ORTHO05D004104 1.3e-222 776.5 539 76.1
FAN06G0334 Fragaria x ananassa HOM05D003568 ORTHO05D004104 2.2e-222 775.8 551 74.8
Cpa.g.sc184.32 Carica papaya HOM05D003568 ORTHO05D004104 2.9e-222 775.4 556 73.9
CiPaw.02G034600 Carya illinoinensis HOM05D003568 ORTHO05D004104 2.9e-222 775.4 550 75.1
ClCG05G001260 Citrullus lanatus HOM05D003568 ORTHO05D004104 5.0e-222 774.6 562 74.0
Manes.01G252500 Manihot esculenta HOM05D003568 ORTHO05D004104 6.5e-222 774.2 551 75.0
Sabra14G0065400 Salix brachista HOM05D003568 ORTHO05D004104 6.5e-222 774.2 553 74.3
Solyc10g019140.1 Solanum lycopersicum HOM05D003568 ORTHO05D004104 1.1e-221 773.5 521 81.2
Duzib205G0971 Durio zibethinus HOM05D003568 ORTHO05D004104 1.5e-221 773.1 538 77.0
FAN01G2394 Fragaria x ananassa HOM05D003568 ORTHO05D004104 1.9e-221 772.7 551 74.6
TWI59G1008 Tripterygium wilfordii HOM05D003568 ORTHO05D004104 4.2e-221 771.5 551 75.0
COL.COLO4_22311 Corchorus olitorius HOM05D003568 ORTHO05D004104 1.2e-220 770.0 538 76.0
FAN06G4614 Fragaria x ananassa HOM05D003568 ORTHO05D004104 1.2e-220 770.0 551 74.2
Gohir.D12G276500 Gossypium hirsutum HOM05D003568 ORTHO05D004104 1.6e-220 769.6 538 76.0
Gorai.008G297000 Gossypium raimondii HOM05D003568 ORTHO05D004104 1.6e-220 769.6 538 76.0
QL04p055468 Quercus lobata HOM05D003568 ORTHO05D004104 1.6e-220 769.6 549 74.7
Ciclev10018853m.g Citrus clementina HOM05D003568 ORTHO05D004104 6.1e-220 767.7 551 73.7
Gohir.A12G275800 Gossypium hirsutum HOM05D003568 ORTHO05D004104 6.1e-220 767.7 538 75.7
Duzib068G0821 Durio zibethinus HOM05D003568 ORTHO05D004104 1.8e-219 766.1 538 75.8
TAR375G0541 Trochodendron aralioides HOM05D003568 ORTHO05D004104 2.3e-219 765.8 551 73.3
Aqoxy2G00934 Aquilegia oxysepala HOM05D003568 ORTHO05D004104 5.2e-219 764.6 551 73.3
Thhalv10012686m.g Eutrema salsugineum HOM05D003568 ORTHO05D004104 8.8e-219 763.8 548 73.0
Aa31LG3G14860 Aethionema arabicum HOM05D003568 ORTHO05D004104 3.4e-218 761.9 538 73.2
CARHR200740 Cardamine hirsuta HOM05D003568 ORTHO05D004104 5.7e-218 761.1 537 73.6
Sc03g0008850 Simmondsia chinensis HOM05D003568 ORTHO05D004104 5.7e-218 761.1 543 73.5
Thecc.03G000600 Theobroma cacao HOM05D003568 ORTHO05D004104 7.5e-218 760.8 538 75.5
AL6G23170 Arabidopsis lyrata HOM05D003568 ORTHO05D004104 2.2e-217 759.2 535 73.6
AT5G12370 Arabidopsis thaliana HOM05D003568 ORTHO05D004104 2.2e-217 759.2 535 73.6
Glyma.07G046100 Glycine max HOM05D003568 ORTHO05D004104 2.2e-217 759.2 554 73.1
Lj7A507T47 Lonicera japonica HOM05D003568 ORTHO05D004104 2.8e-217 758.8 601 70.2
Sp6g31270 Schrenkiella parvula HOM05D003568 ORTHO05D004104 3.7e-217 758.4 537 73.6
Manes.05G029701 Manihot esculenta HOM05D003568 ORTHO05D004104 4.8e-217 758.1 545 73.9
Rhsim07G0010700 Rhododendron simsii HOM05D003568 ORTHO05D004104 8.3e-217 757.3 641 65.1
C09p64520 Brassica napus HOM05D003568 ORTHO05D004104 1.1e-216 756.9 550 72.4
Ca_23448_v3 Cicer arietinum L. HOM05D003568 ORTHO05D004104 1.1e-216 756.9 551 74.2
Atru.chr5.561 Acer truncatum HOM05D003568 ORTHO05D004104 3.1e-216 755.4 551 73.0
Atru.chr5.579 Acer truncatum HOM05D003568 ORTHO05D004104 3.1e-216 755.4 551 73.0
Carub.0006s1087 Capsella rubella HOM05D003568 ORTHO05D004104 5.4e-216 754.6 535 73.1
Sopen10g009040 Solanum pennellii HOM05D003568 ORTHO05D004104 7.0e-216 754.2 591 72.9
A10p25450 Brassica napus HOM05D003568 ORTHO05D004104 1.2e-215 753.4 547 72.0
BraA10t44609Z Brassica rapa HOM05D003568 ORTHO05D004104 1.2e-215 753.4 547 72.0
Nn6g35074 Nelumbo nucifera HOM05D003568 ORTHO05D004104 1.2e-215 753.4 551 72.2
BolC9t59286H Brassica oleracea HOM05D003568 ORTHO05D004104 1.6e-215 753.1 550 72.0
Glyma.16G014200 Glycine max HOM05D003568 ORTHO05D004104 1.7e-214 749.6 558 72.2
unitig_21.g20340 Utricularia gibba HOM05D003568 ORTHO05D004104 5.0e-214 748.0 560 71.2
BolC3t13154H Brassica oleracea HOM05D003568 ORTHO05D004104 1.5e-213 746.5 537 72.6
Lj3g0009129 Lotus japonicus HOM05D003568 ORTHO05D004104 1.5e-213 746.5 554 72.7
Sabra02G0147000 Salix brachista HOM05D003568 ORTHO05D004104 2.5e-213 745.7 620 66.8
Gorai.006G064200 Gossypium raimondii HOM05D003568 ORTHO05D004104 7.2e-213 744.2 538 73.8
Phvul.010G123000 Phaseolus vulgaris HOM05D003568 ORTHO05D004104 9.4e-213 743.8 553 72.7
Psat4g164920 Pisum sativum HOM05D003568 ORTHO05D004104 1.2e-212 743.4 550 72.4
BraA03t09896Z Brassica rapa HOM05D003568 ORTHO05D004104 2.7e-212 742.3 535 72.9
Gohir.D09G046200 Gossypium hirsutum HOM05D003568 ORTHO05D004104 8.0e-212 740.7 538 73.6
EL10Ac5g12970 Beta vulgaris HOM05D003568 ORTHO05D004104 1.8e-211 739.6 535 71.8
Medtr8g023330 Medicago truncatula HOM05D003568 ORTHO05D004104 2.3e-211 739.2 551 72.2
VMungo0331G1030 Vigna mungo HOM05D003568 ORTHO05D004104 3.0e-211 738.8 553 71.6
BcaB01g05405 Brassica carinata HOM05D003568 ORTHO05D004104 2.6e-210 735.7 546 71.1
Gohir.A09G045200 Gossypium hirsutum HOM05D003568 ORTHO05D004104 4.4e-210 734.9 538 73.2
PSO266G0033 Papaver somniferum HOM05D003568 ORTHO05D004104 4.4e-210 734.9 557 72.0
C03p06540 Brassica napus HOM05D003568 ORTHO05D004104 3.7e-209 731.9 559 69.8
A03p05590 Brassica napus HOM05D003568 ORTHO05D004104 4.1e-208 728.4 560 69.6
Hund23292 Selenicereus undatus HOM05D003568 ORTHO05D004104 1.6e-207 726.5 548 69.5
SalBow6G0922 Salvia bowleyana HOM05D003568 ORTHO05D004104 1.0e-206 723.8 554 71.5
PSO478G3452 Papaver somniferum HOM05D003568 ORTHO05D004104 2.9e-206 722.2 591 68.0
Sed0017270 Sechium edule HOM05D003568 ORTHO05D004104 2.9e-206 722.2 538 72.3
Lalb_Chr17g0343201 Lupinus albus HOM05D003568 ORTHO05D004104 5.0e-206 721.5 536 72.6
SalBow6G4826 Salvia bowleyana HOM05D003568 ORTHO05D004104 5.0e-206 721.5 554 71.3
arahy.Tifrunner.gnm1.ann1.PRYL24 Arachis hypogaea HOM05D003568 ORTHO05D004104 3.3e-205 718.8 534 71.9
arahy.Tifrunner.gnm1.ann1.Z56S5U Arachis hypogaea HOM05D003568 ORTHO05D004104 3.3e-205 718.8 534 71.9
Dinv09574 Davidia involucrata HOM05D003568 ORTHO05D004104 2.8e-204 715.7 530 72.3
Lalb_Chr18g0044861 Lupinus albus HOM05D003568 ORTHO05D004104 1.8e-203 713.0 530 71.7
HPP92_003241 Vanilla planifolia HOM05D003568 ORTHO05D004104 1.7e-201 706.4 538 69.7
Haze_15562 Corylus avellana HOM05D003568 ORTHO05D004104 5.9e-199 698.0 603 64.8
ATR0829G125 Amborella trichopoda HOM05D003568 ORTHO05D004104 6.2e-196 688.0 536 67.9
COL.COLO4_15385 Corchorus olitorius HOM05D003568 ORTHO05D004104 8.0e-196 687.6 503 73.6
SEGI_32899 Sequoiadendron giganteum HOM05D003568 ORTHO05D004104 8.3e-193 677.6 535 67.5
ECA238G2843 Erigeron canadensis HOM05D003568 ORTHO05D004104 2.0e-191 672.9 532 66.7
AUR62036376 Chenopodium quinoa HOM05D003568 ORTHO05D004104 1.1e-189 667.2 531 67.0
AUR62030738 Chenopodium quinoa HOM05D003568 ORTHO05D004104 2.5e-189 666.0 611 60.1
TPR.G21815 Trifolium pratense HOM05D003568 ORTHO05D004104 9.5e-189 664.1 534 68.0
Lsat_1_v5_gn_3_138540 Lactuca sativa HOM05D003568 ORTHO05D004104 2.1e-188 662.9 534 65.4
Hund02118 Selenicereus undatus HOM05D003568 ORTHO05D004104 2.9e-185 652.5 547 64.2
HanXRQChr13g0415591 Helianthus annuus HOM05D003568 ORTHO05D004104 4.9e-185 651.7 538 66.0
Os12g0238100 Oryza sativa ssp. japonica HOM05D003568 ORTHO05D004104 8.3e-185 651.0 528 65.7
HanXRQChr02g0038861 Helianthus annuus HOM05D003568 ORTHO05D004104 3.2e-184 649.0 538 65.6
FAN10G2437 Fragaria x ananassa HOM05D003568 ORTHO05D004104 1.6e-183 646.7 538 66.5
Zm00001eb133590 Zea mays HOM05D003568 ORTHO05D004104 8.4e-177 624.4 528 64.0
Sopen10g009080 Solanum pennellii HOM05D003568 ORTHO05D004104 1.0e-166 590.9 555 64.3
Sed0024683 Sechium edule HOM05D003568 ORTHO05D004104 3.3e-165 585.9 549 61.0
Mapoly0070s0084 Marchantia polymorpha HOM05D003568 ORTHO05D004104 2.1e-156 556.6 547 57.8
CDE07G1174 Ceratophyllum demersum HOM05D003568 ORTHO05D004104 3.6e-156 555.8 473 63.2
AagrBONN_evm.TU.Sc2ySwM_117.807 Anthoceros agrestis HOM05D003568 ORTHO05D004104 5.3e-155 552.0 522 57.3
Sopen00g003310 Solanum pennellii HOM05D003568 ORTHO05D004104 1.1e-149 534.3 600 57.8
SMO329G0014 Selaginella moellendorffii HOM05D003568 ORTHO05D004104 2.5e-149 533.1 547 55.4
Pp3c7_5960 Physcomitrium patens HOM05D003568 ORTHO05D004104 2.9e-145 519.6 547 55.0
Nitab4.5_0006926g0010 Nicotiana tabacum HOM05D003568 ORTHO05D004104 1.3e-129 467.6 563 51.9
FAN10G2647 Fragaria x ananassa HOM05D003568 ORTHO05D004104 3.0e-126 456.4 321 76.0
Solyc10g019110.2 Solanum lycopersicum HOM05D003568 ORTHO05D004104 1.5e-125 454.1 355 73.2
CBR_g38471 Chara braunii HOM05D003568 ORTHO05D004104 5.7e-125 452.2 585 47.2
TAR374G0165 Trochodendron aralioides HOM05D003568 ORTHO05D004104 3.5e-106 389.8 270 74.8
AagrBONN_evm.TU.Sc2ySwM_362.1439 Anthoceros agrestis HOM05D003568 ORTHO05D004104 7.0e-99 365.5 577 40.0
MBI03_g34513_MAGBIO Magnolia biondii HOM05D003568 ORTHO05D004104 5.0e-97 359.4 261 73.6
Pp3c17_2120 Physcomitrium patens HOM05D003568 ORTHO05D004104 4.0e-94 349.7 545 42.6
Sopen10g009060 Solanum pennellii HOM05D003568 ORTHO05D004104 4.4e-93 346.3 248 77.0
PSO478G4032 Papaver somniferum HOM05D003568 ORTHO05D004104 2.7e-82 310.5 352 53.1
Sopen00g004930 Solanum pennellii HOM05D003568 ORTHO05D004104 1.4e-78 298.1 244 68.9
SEGI_20614 Sequoiadendron giganteum HOM05D003568 ORTHO05D004104 1.7e-68 264.6 217 65.4
Hma1.2p1_0335F.1_g128910 Hydrangea macrophylla HOM05D003568 ORTHO05D004104 4.6e-66 256.5 156 83.3
Haze_19031 Corylus avellana HOM05D003568 ORTHO05D004104 6.8e-62 242.7 302 51.3
Pp3c10_23750 Physcomitrium patens HOM05D003568 ORTHO05D004104 4.4e-53 213.4 537 32.2
HanXRQChr14g0445661 Helianthus annuus HOM05D003568 ORTHO05D004104 3.9e-41 173.7 141 64.5
Solyc10g019120.1 Solanum lycopersicum HOM05D003568 ORTHO05D004104 3.9e-41 173.7 148 67.6
PRCOL_00002354 Prasinoderma coloniale HOM05D003568 ORTHO05D004104 7.9e-34 149.4 520 29.6
Glyma.07G162100 Glycine max HOM05D003568 ORTHO05D004104 3.8e-28 130.6 83 80.7
ClCG05G001230 Citrullus lanatus HOM05D003568 ORTHO05D004104 8.4e-28 129.4 229 40.2
MBI03_g44580_MAGBIO Magnolia biondii HOM05D003568 ORTHO05D004104 1.8e-25 121.7 107 61.7
MBI17_g30844_MAGBIO Magnolia biondii HOM05D003568 ORTHO05D004104 5.1e-25 120.2 107 61.7
MBI19_g38425_MAGBIO Magnolia biondii HOM05D003568 ORTHO05D004104 8.2e-23 112.8 132 52.3
QL05p039330 Quercus lobata HOM05D003568 ORTHO05D004104 8.2e-23 112.8 114 62.3
CAN.G77.8 Capsicum annuum HOM05D003568 ORTHO05D004104 1.1e-16 92.4 83 60.2
MCO10G270 Micromonas commoda HOM05D003568 ORTHO05D004104 1.1e-16 92.4 394 24.4
Haze_11234 Corylus avellana HOM05D001460 ORTHO05D001337 9.7e-16 89.4 246 34.6
MBI14_g09475_MAGBIO Magnolia biondii HOM05D004851 ORTHO05D004104 5.0e-12 77.0 65 61.5
MBI08_g05068_MAGBIO Magnolia biondii HOM05D003568 ORTHO05D004104 2.5e-11 74.7 65 60.0
SalBow1G6610 Salvia bowleyana HOM05D019231 ORTHO05D019643 7.2e-11 73.2 53 71.7
Ah.12g059250 Amaranthus hybridus HOM05D003568 ORTHO05D004104 2.7e-10 71.2 80 52.5
SEGI_24596 Sequoiadendron giganteum HOM05D003568 ORTHO05D004104 6.1e-10 70.1 62 56.5
RcHm_v2.0_Chr1g0375661 Rosa chinensis HOM05D003568 ORTHO05D004104 6.7e-09 66.6 100 44.0
MBI19_g10189_MAGBIO Magnolia biondii HOM05D000961 ORTHO05D000841 8.8e-09 66.2 60 56.7
TPR.G39543 Trifolium pratense HOM05D003568 ORTHO05D004104 2.8e-07 61.2 84 44.0
CBR_g24150 Chara braunii HOM05D003568 ORTHO05D004104 4.8e-07 60.5 122 32.0
RcHm_v2.0_Chr1g0375601 Rosa chinensis HOM05D003568 ORTHO05D004104 8.2e-07 59.7 55 61.8
SalBow5G2358 Salvia bowleyana HOM05D019231 ORTHO05D004104 1.1e-06 59.3 39 66.7
SalBow4G2543 Salvia bowleyana HOM05D003568 ORTHO05D004104 1.4e-06 58.9 39 66.7
SalBow6G4266 Salvia bowleyana HOM05D019231 ORTHO05D019643 5.3e-06 57.0 42 69.0
SalBow8G2325 Salvia bowleyana HOM05D019231 ORTHO05D019643 5.3e-06 57.0 42 69.0
SalBow7G3100 Salvia bowleyana HOM05D003568 ORTHO05D019643 6.9e-06 56.6 45 62.2


User provided reference genes

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