Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004320g0040 Nicotiana tabacum HOM05D006822 ORTHO05D008884 0.0e+00 1353.2 726 100.0
Nitab4.5_0013912g0010 Nicotiana tabacum HOM05D006822 ORTHO05D008884 0.0e+00 1158.7 671 94.2
PGSC0003DMG401012750 Solanum tuberosum HOM05D006822 ORTHO05D008884 1.2e-287 993.0 688 81.5
Sopen01g037280 Solanum pennellii HOM05D006822 ORTHO05D008884 2.1e-281 972.2 688 79.9
Solyc01g091510.4 Solanum lycopersicum HOM05D006822 ORTHO05D008884 3.7e-281 971.5 688 80.1
Peaxi162Scf00021g01312 Petunia axillaris HOM05D006822 ORTHO05D008884 1.0e-275 953.4 740 74.2
CAN.G170.5 Capsicum annuum HOM05D006822 ORTHO05D008884 2.3e-275 952.2 688 78.2
Dinv32391 Davidia involucrata HOM05D004001 ORTHO05D004559 1.7e-198 696.8 680 63.2
Rhsim07G0025500 Rhododendron simsii HOM05D006822 ORTHO05D008884 8.9e-195 684.5 666 59.9
vmacro13383 Vaccinium macrocarpon HOM05D006822 ORTHO05D008884 1.5e-194 683.7 693 56.9
Migut.B01651 Erythranthe guttata HOM05D006822 ORTHO05D008884 8.1e-188 661.4 697 58.2
Oeu003493.1 Olea europaea HOM05D006822 ORTHO05D008884 9.0e-187 657.9 671 59.2
CiPaw.01G260400 Carya illinoinensis HOM05D006822 ORTHO05D008884 2.2e-185 653.3 667 58.5
Cc02_g36520 Coffea canephora HOM05D006822 ORTHO05D008884 3.8e-185 652.5 703 57.6
GSVIVG01027532001 Vitis vinifera HOM05D006822 ORTHO05D008884 4.6e-183 645.6 667 58.8
TAR375G1023 Trochodendron aralioides HOM05D006822 ORTHO05D008884 7.9e-183 644.8 670 59.4
Lj7A526T89 Lonicera japonica HOM05D006822 ORTHO05D008884 2.3e-182 643.3 673 59.1
Hma1.2p1_0053F.1_g030830 Hydrangea macrophylla HOM05D006822 ORTHO05D008884 1.1e-181 641.0 671 56.2
Haze_16833 Corylus avellana HOM05D006822 ORTHO05D008884 9.6e-181 637.9 669 58.0
SGA_v2.0_scaffold95G28889 Striga asiatica HOM05D006822 ORTHO05D008884 2.1e-180 636.7 701 56.3
Manes.01G264800 Manihot esculenta HOM05D006822 ORTHO05D008884 1.8e-179 633.6 666 58.0
Thecc.01G374100 Theobroma cacao HOM05D006822 ORTHO05D008884 8.4e-177 624.8 671 58.9
CSS0016394 Camellia sinensis var. sinensis HOM05D006822 ORTHO05D008884 5.5e-176 622.1 668 56.3
Lalb_Chr01g0021331 Lupinus albus HOM05D006822 ORTHO05D008884 7.1e-176 621.7 699 52.2
Cfa001701 Carpinus fangiana HOM05D006822 ORTHO05D008884 1.6e-175 620.5 669 56.8
Atru.chr5.328 Acer truncatum HOM05D006822 ORTHO05D008884 2.1e-175 620.2 671 57.2
Aqoxy7G00564 Aquilegia oxysepala HOM05D006822 ORTHO05D008884 4.6e-175 619.0 659 56.6
Cpa.g.sc18.138 Carica papaya HOM05D006822 ORTHO05D008884 1.0e-174 617.8 665 55.0
HanXRQChr04g0122211 Helianthus annuus HOM05D006822 ORTHO05D008884 3.9e-174 615.9 681 55.2
Potri.002G149800 Populus trichocarpa HOM05D006822 ORTHO05D008884 1.5e-173 614.0 673 56.9
Ciclev10019178m.g Citrus clementina HOM05D006822 ORTHO05D008884 9.6e-173 611.3 694 55.6
Glyma.09G267800 Glycine max HOM05D006822 ORTHO05D008884 3.7e-172 609.4 674 53.4
MD02G1201200 Malus domestica HOM05D006822 ORTHO05D008884 2.6e-170 603.2 668 55.5
Lj1g0013249 Lotus japonicus HOM05D006822 ORTHO05D008884 1.9e-168 597.0 679 54.2
Ca_07832_v3 Cicer arietinum L. HOM05D006822 ORTHO05D008884 7.1e-168 595.1 679 53.5
VMungo1383G2566 Vigna mungo HOM05D006822 ORTHO05D008884 1.6e-167 594.0 672 52.1
Glyma.18G222100 Glycine max HOM05D006822 ORTHO05D008884 1.0e-166 591.3 674 53.0
ClCG05G002100 Citrullus lanatus HOM05D006822 ORTHO05D008884 3.0e-166 589.7 672 55.5
COL.COLO4_12575 Corchorus olitorius HOM05D006822 ORTHO05D008884 1.1e-165 587.8 679 54.2
Duzib133G0703 Durio zibethinus HOM05D006822 ORTHO05D008884 1.9e-165 587.0 673 56.5
Sabra02G0118500 Salix brachista HOM05D006822 ORTHO05D008884 9.6e-165 584.7 674 54.5
Hund27354 Selenicereus undatus HOM05D006822 ORTHO05D008884 1.3e-164 584.3 684 53.1
PSO478G2587 Papaver somniferum HOM05D006822 ORTHO05D008884 1.6e-164 583.9 669 51.7
Actinidia31423 Actinidia chinensis HOM05D006822 ORTHO05D008884 3.7e-164 582.8 672 53.4
CsaV3_3G009540 Cucumis sativus L. HOM05D006822 ORTHO05D008884 4.8e-164 582.4 671 55.4
Lsat_1_v5_gn_7_7481 Lactuca sativa HOM05D006822 ORTHO05D008884 1.8e-163 580.5 663 54.6
Phvul.008G075100 Phaseolus vulgaris HOM05D006822 ORTHO05D008884 1.8e-163 580.5 674 52.2
arahy.Tifrunner.gnm1.ann1.485MU0 Arachis hypogaea HOM05D006822 ORTHO05D008884 3.1e-163 579.7 681 53.7
MELO3C006175.2 Cucumis melo HOM05D006822 ORTHO05D008884 4.5e-162 575.9 673 55.0
Hma1.2p1_0053F.1_g030820 Hydrangea macrophylla HOM05D006822 ORTHO05D008884 3.8e-161 572.8 540 58.9
EL10Ac1g00937 Beta vulgaris HOM05D006822 ORTHO05D008884 5.0e-161 572.4 670 54.5
Gohir.A08G031700 Gossypium hirsutum HOM05D006822 ORTHO05D008884 6.5e-161 572.0 679 54.5
Gorai.004G041400 Gossypium raimondii HOM05D006822 ORTHO05D008884 1.4e-160 570.9 678 52.8
Gohir.D08G042800 Gossypium hirsutum HOM05D006822 ORTHO05D008884 2.5e-160 570.1 678 53.2
QL08p051944 Quercus lobata HOM05D006822 ORTHO05D008884 9.3e-160 568.2 665 54.6
CANSAT56G1004 Cannabis sativa HOM05D006822 ORTHO05D008884 1.1e-157 561.2 671 53.1
Ah.05g175170 Amaranthus hybridus HOM05D006822 ORTHO05D008884 3.3e-157 559.7 689 51.7
Eucgr.D02443 Eucalyptus grandis HOM05D006822 ORTHO05D008884 8.2e-156 555.1 669 53.7
Sed0020963 Sechium edule HOM05D006822 ORTHO05D008884 8.2e-156 555.1 664 53.3
Nn1g01174 Nelumbo nucifera HOM05D006822 ORTHO05D008884 1.4e-155 554.3 577 57.4
arahy.Tifrunner.gnm1.ann1.K16L32 Arachis hypogaea HOM05D006822 ORTHO05D008884 1.7e-153 547.4 668 51.9
AUR62013615 Chenopodium quinoa HOM05D006822 ORTHO05D008884 2.9e-153 546.6 673 49.6
Sc23g0003500 Simmondsia chinensis HOM05D006822 ORTHO05D008884 2.9e-153 546.6 693 50.6
FAN01G0942 Fragaria x ananassa HOM05D006822 ORTHO05D008884 1.2e-151 541.2 646 55.3
Prupe.2G147600 Prunus persica HOM05D006822 ORTHO05D008884 1.5e-149 534.3 549 55.9
TWI14G1233 Tripterygium wilfordii HOM05D006822 ORTHO05D008884 2.6e-149 533.5 663 51.6
Medtr7g075170 Medicago truncatula HOM05D006822 ORTHO05D008884 1.1e-147 528.1 672 49.6
PGR031G1001 Punica granatum HOM05D006822 ORTHO05D008884 9.1e-147 525.0 660 51.1
TPR.G26925 Trifolium pratense HOM05D006822 ORTHO05D008884 1.2e-146 524.6 669 49.6
MBI04_g46545_MAGBIO Magnolia biondii HOM05D006822 ORTHO05D008884 2.0e-146 523.9 562 54.3
AUR62004233 Chenopodium quinoa HOM05D006822 ORTHO05D008884 4.5e-146 522.7 666 49.7
HPP92_015074 Vanilla planifolia HOM05D006822 ORTHO05D008884 4.5e-146 522.7 684 47.8
Psat3g115280 Pisum sativum HOM05D006822 ORTHO05D008884 1.7e-145 520.8 669 48.4
unitig_22.g5376 Utricularia gibba HOM05D006822 ORTHO05D008884 1.6e-143 514.2 665 49.3
RcHm_v2.0_Chr1g0350861 Rosa chinensis HOM05D006822 ORTHO05D008884 8.8e-142 508.4 619 54.1
FAN06G2864 Fragaria x ananassa HOM05D006822 ORTHO05D008884 7.4e-141 505.4 544 54.8
FvH4_7g12110 Fragaria vesca HOM05D006822 ORTHO05D008884 1.3e-140 504.6 544 54.6
CDE11G0821 Ceratophyllum demersum HOM05D006822 ORTHO05D008884 1.6e-138 497.7 653 47.9
Os04g0574600 Oryza sativa ssp. japonica HOM05D006822 ORTHO05D008884 4.5e-138 496.1 678 48.1
ECA236G3401 Erigeron canadensis HOM05D006822 ORTHO05D008884 1.0e-137 495.0 552 54.7
Lsat_1_v5_gn_3_133341 Lactuca sativa HOM05D006822 ORTHO05D008884 3.6e-135 486.5 546 50.7
Medtr7g075185 Medicago truncatula HOM05D006822 ORTHO05D008884 4.4e-133 479.6 659 46.4
THA.LOC104817014 Tarenaya hassleriana HOM05D006822 ORTHO05D008884 1.3e-132 478.0 658 47.0
Thhalv10007219m.g Eutrema salsugineum HOM05D006822 ORTHO05D008884 8.2e-132 475.3 581 50.4
Aa31LG1G11250 Aethionema arabicum HOM05D006822 ORTHO05D008884 1.2e-130 471.5 729 43.2
Zm00001eb073430 Zea mays HOM05D006822 ORTHO05D008884 1.3e-129 468.0 684 44.9
AT1G01930 Arabidopsis thaliana HOM05D006822 ORTHO05D008884 6.5e-129 465.7 531 50.7
Sp1g00370 Schrenkiella parvula HOM05D006822 ORTHO05D008884 4.2e-128 463.0 551 49.7
HanXRQChr13g0425441 Helianthus annuus HOM05D006822 ORTHO05D008884 3.6e-127 459.9 534 50.6
CSS0048598 Camellia sinensis var. sinensis HOM05D006822 ORTHO05D008884 8.0e-127 458.8 569 51.7
AL1G10390 Arabidopsis lyrata HOM05D006822 ORTHO05D008884 1.4e-126 458.0 545 48.8
Carub.0001s0031 Capsella rubella HOM05D006822 ORTHO05D008884 4.8e-124 449.5 529 49.7
SEGI_38546 Sequoiadendron giganteum HOM05D006822 ORTHO05D008884 1.9e-120 437.6 682 42.7
C08p53940 Brassica napus HOM05D006822 ORTHO05D008884 4.7e-119 433.0 522 48.9
BolC8t52907H Brassica oleracea HOM05D006822 ORTHO05D008884 4.7e-119 433.0 522 48.9
BraA09t42269Z Brassica rapa HOM05D006822 ORTHO05D008884 4.4e-117 426.4 529 47.6
Eucgr.L02337 Eucalyptus grandis HOM05D006822 ORTHO05D008884 3.3e-112 410.2 588 49.1
ECA240G3107 Erigeron canadensis HOM05D006822 ORTHO05D008884 7.8e-106 389.0 508 49.0
FAN03G3111 Fragaria x ananassa HOM05D006822 ORTHO05D008884 5.6e-104 382.9 518 46.9
ATR0757G063 Amborella trichopoda HOM05D006822 ORTHO05D008884 1.2e-95 355.1 379 49.9
Mapoly0008s0196 Marchantia polymorpha HOM05D006822 ORTHO05D008884 9.2e-91 339.0 686 37.6
COL.COLO4_05508 Corchorus olitorius HOM05D006822 ORTHO05D008884 3.5e-90 337.0 392 48.0
Pp3c3_38070 Physcomitrium patens HOM05D006822 ORTHO05D008884 1.1e-88 332.0 529 42.2
AagrBONN_evm.TU.Sc2ySwM_117.565 Anthoceros agrestis HOM05D006822 ORTHO05D008884 5.2e-86 323.2 628 38.2
FAN10G0810 Fragaria x ananassa HOM05D006822 ORTHO05D008884 3.0e-65 254.2 521 36.1
CARHR000420 Cardamine hirsuta HOM05D006822 ORTHO05D008884 3.9e-65 253.8 331 47.4
CARHR000430 Cardamine hirsuta HOM05D006822 ORTHO05D008884 4.6e-58 230.3 230 51.7
Cre07.g325715 Chlamydomonas reinhardtii HOM05D006822 ORTHO05D008884 1.1e-51 209.1 563 32.3
SEGI_35234 Sequoiadendron giganteum HOM05D006822 ORTHO05D008884 6.5e-44 183.3 230 46.5
PRCOL_00005597 Prasinoderma coloniale HOM05D006822 ORTHO05D008884 3.1e-30 137.9 443 33.2
Cfa022202 Carpinus fangiana HOM05D006822 ORTHO05D004559 6.9e-30 136.7 588 28.2
Medtr7g075430 Medicago truncatula HOM05D006822 ORTHO05D008884 7.7e-21 106.7 168 41.1
ATR0757G024 Amborella trichopoda HOM05D006822 ORTHO05D004559 8.5e-12 76.6 180 50.0
arahy.Tifrunner.gnm1.ann1.EYK22X Arachis hypogaea HOM05D006822 ORTHO05D008884 3.2e-11 74.7 51 68.6
Aqoxy2G02051 Aquilegia oxysepala HOM05D004629 ORTHO05D004559 4.4e-08 64.3 232 29.7
Medtr7g075450 Medicago truncatula HOM05D006822 ORTHO05D008884 3.7e-07 61.2 103 38.8
CsaV3_4G032230 Cucumis sativus L. HOM05D006822 ORTHO05D008884 1.4e-06 59.3 96 39.6
HanXRQChr13g0425831 Helianthus annuus HOM05D006822 ORTHO05D226009 2.4e-06 58.5 39 76.9


User provided reference genes

Program Settings