Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004318g0030 Nicotiana tabacum HOM05D000358 ORTHO05D009346 1.5e-95 352.8 180 100.0
Nitab4.5_0005971g0010 Nicotiana tabacum HOM05D000358 ORTHO05D009346 5.3e-88 327.8 180 94.4
Sopen09g027050 Solanum pennellii HOM05D000358 ORTHO05D009346 8.5e-70 267.3 181 80.7
Solyc09g065300.4 Solanum lycopersicum HOM05D000358 ORTHO05D009346 8.2e-65 250.8 212 68.9
Peaxi162Scf00641g00315 Petunia axillaris HOM05D000358 ORTHO05D009346 6.5e-62 241.1 180 75.6
PGSC0003DMG400019331 Solanum tuberosum HOM05D000358 ORTHO05D009346 3.3e-58 228.8 154 83.1
CSS0040373 Camellia sinensis var. sinensis HOM05D000358 ORTHO05D009346 9.7e-50 200.7 181 62.4
Dinv32921 Davidia involucrata HOM05D000358 ORTHO05D002525 4.8e-49 198.4 168 63.1
Glyma.03G155200 Glycine max HOM05D000358 ORTHO05D009346 8.2e-49 197.6 171 58.5
FvH4_2g23371 Fragaria vesca HOM05D000358 ORTHO05D009346 7.7e-47 191.0 126 69.8
RcHm_v2.0_Chr6g0290831 Rosa chinensis HOM05D000358 ORTHO05D009346 7.7e-47 191.0 123 71.5
GSVIVG01001163001 Vitis vinifera HOM05D000358 ORTHO05D009346 7.7e-47 191.0 150 63.3
Cpa.g.sc52.51 Carica papaya HOM05D000358 ORTHO05D009346 3.8e-46 188.7 130 70.8
Sabra05G0160900 Salix brachista HOM05D000358 ORTHO05D009346 6.5e-46 188.0 130 68.5
MSTRG.12558 Avicennia marina HOM05D000358 ORTHO05D009346 1.5e-45 186.8 138 68.1
Prupe.8G239600 Prunus persica HOM05D000358 ORTHO05D009346 1.5e-45 186.8 172 59.3
CANSAT25G1780 Cannabis sativa HOM05D000358 ORTHO05D009346 4.2e-45 185.3 147 66.0
TWI14G1410 Tripterygium wilfordii HOM05D000358 ORTHO05D009346 9.4e-45 184.1 169 58.0
Lj1g0011093 Lotus japonicus HOM05D000358 ORTHO05D009346 1.2e-44 183.7 130 66.9
Manes.05G077400 Manihot esculenta HOM05D000358 ORTHO05D009346 1.2e-44 183.7 175 58.3
Phvul.001G152500 Phaseolus vulgaris HOM05D000358 ORTHO05D009346 1.2e-44 183.7 135 66.7
Atru.chr5.1460 Acer truncatum HOM05D000358 ORTHO05D009346 2.1e-44 183.0 172 56.4
Lj1A47T39 Lonicera japonica HOM05D000358 ORTHO05D009346 8.0e-44 181.0 186 55.4
Migut.N02045 Erythranthe guttata HOM05D000358 ORTHO05D009346 1.4e-43 180.3 132 66.7
Thecc.01G276900 Theobroma cacao HOM05D000358 ORTHO05D009346 1.4e-43 180.3 175 56.6
arahy.Tifrunner.gnm1.ann1.M7C8NM Arachis hypogaea HOM05D000358 ORTHO05D009346 1.8e-43 179.9 171 54.4
MD11G1284000 Malus domestica HOM05D000358 ORTHO05D009346 1.8e-43 179.9 175 57.7
AUR62028609 Chenopodium quinoa HOM05D000358 ORTHO05D009346 2.3e-43 179.5 176 58.5
arahy.Tifrunner.gnm1.ann1.1D6AAZ Arachis hypogaea HOM05D000358 ORTHO05D009346 4.0e-43 178.7 171 54.4
Hund09500 Selenicereus undatus HOM05D000358 ORTHO05D009346 4.0e-43 178.7 174 54.6
Carub.0006s3438 Capsella rubella HOM05D000358 ORTHO05D009346 6.7e-43 177.9 162 59.3
SGA_v2.0_scaffold81G26022 Striga asiatica HOM05D000358 ORTHO05D009346 8.8e-43 177.6 136 64.0
TAR375G0394 Trochodendron aralioides HOM05D000358 ORTHO05D009346 8.8e-43 177.6 167 56.9
TAR636G2394 Trochodendron aralioides HOM05D000358 ORTHO05D009346 8.8e-43 177.6 154 61.0
MBI04_g20822_MAGBIO Magnolia biondii HOM05D000358 ORTHO05D009346 1.2e-42 177.2 123 65.0
ECA247G2961 Erigeron canadensis HOM05D000358 ORTHO05D009346 2.6e-42 176.0 158 57.6
HanXRQChr15g0466741 Helianthus annuus HOM05D000358 ORTHO05D009346 4.4e-42 175.3 169 56.2
Gorai.007G137700 Gossypium raimondii HOM05D000358 ORTHO05D009346 7.5e-42 174.5 176 56.8
Ciclev10022514m.g Citrus clementina HOM05D000358 ORTHO05D009346 9.7e-42 174.1 176 55.7
PGR044G2401 Punica granatum HOM05D000358 ORTHO05D009346 9.7e-42 174.1 131 60.3
Duzib133G0337 Durio zibethinus HOM05D000358 ORTHO05D009346 1.3e-41 173.7 175 57.1
Lsat_1_v5_gn_9_3480 Lactuca sativa HOM05D000358 ORTHO05D009346 1.7e-41 173.3 105 76.2
Rhsim13G0026100 Rhododendron simsii HOM05D000358 ORTHO05D009346 1.7e-41 173.3 105 75.2
Thhalv10029025m.g Eutrema salsugineum HOM05D000358 ORTHO05D009346 2.2e-41 172.9 130 63.1
EL10Ac5g10557 Beta vulgaris HOM05D000358 ORTHO05D009346 2.8e-41 172.6 179 55.9
CsaV3_6G037210 Cucumis sativus L. HOM05D000358 ORTHO05D009346 2.8e-41 172.6 167 55.7
Sed0015724 Sechium edule HOM05D000358 ORTHO05D009346 2.8e-41 172.6 173 53.8
CARHR251060 Cardamine hirsuta HOM05D000358 ORTHO05D009346 3.7e-41 172.2 128 64.8
CiPaw.07G090600 Carya illinoinensis HOM05D000358 ORTHO05D009346 3.7e-41 172.2 173 56.6
Medtr7g095090 Medicago truncatula HOM05D000358 ORTHO05D009346 3.7e-41 172.2 165 55.8
Sp6g02670 Schrenkiella parvula HOM05D000358 ORTHO05D009346 3.7e-41 172.2 171 55.0
Cc01_g19380 Coffea canephora HOM05D000358 ORTHO05D009346 6.3e-41 171.4 151 60.3
BcaC03g16171 Brassica carinata HOM05D000358 ORTHO05D009346 8.2e-41 171.0 127 63.8
C02p39090 Brassica napus HOM05D000358 ORTHO05D009346 8.2e-41 171.0 127 63.8
BolC2t09919H Brassica oleracea HOM05D000358 ORTHO05D009346 8.2e-41 171.0 127 63.8
AL6G50280 Arabidopsis lyrata HOM05D000358 ORTHO05D009346 1.1e-40 170.6 172 55.8
Gohir.D11G128700 Gossypium hirsutum HOM05D000358 ORTHO05D009346 1.1e-40 170.6 174 58.0
PSO210G0760 Papaver somniferum HOM05D000358 ORTHO05D009346 1.1e-40 170.6 130 63.8
PSO761G0166 Papaver somniferum HOM05D000358 ORTHO05D009346 1.1e-40 170.6 130 63.8
BcaB05g23661 Brassica carinata HOM05D000358 ORTHO05D009346 1.4e-40 170.2 127 63.0
A02p24950 Brassica napus HOM05D000358 ORTHO05D009346 1.4e-40 170.2 127 63.8
BraA02t07485Z Brassica rapa HOM05D000358 ORTHO05D009346 1.4e-40 170.2 127 63.8
Actinidia09124 Actinidia chinensis HOM05D000358 ORTHO05D009346 1.8e-40 169.9 105 73.3
SalBow6G4489 Salvia bowleyana HOM05D000358 ORTHO05D009346 1.8e-40 169.9 177 54.2
TPR.G35683 Trifolium pratense HOM05D000358 ORTHO05D009346 1.8e-40 169.9 135 61.5
AT4G02725 Arabidopsis thaliana HOM05D000358 ORTHO05D009346 5.3e-40 168.3 162 56.8
Gohir.A11G123500 Gossypium hirsutum HOM05D000358 ORTHO05D009346 5.3e-40 168.3 176 55.1
BolC9t53153H Brassica oleracea HOM05D000358 ORTHO05D009346 7.0e-40 167.9 160 53.8
BcaC04g24011 Brassica carinata HOM05D000358 ORTHO05D009346 9.1e-40 167.5 160 53.8
A09p02150 Brassica napus HOM05D000358 ORTHO05D009346 1.2e-39 167.2 160 53.8
Potri.005G210700 Populus trichocarpa HOM05D000358 ORTHO05D009346 1.2e-39 167.2 173 54.3
Aqoxy2G03373 Aquilegia oxysepala HOM05D000358 ORTHO05D009346 1.6e-39 166.8 139 59.7
BraA09t35864Z Brassica rapa HOM05D000358 ORTHO05D009346 1.6e-39 166.8 160 53.1
Eucgr.K03368 Eucalyptus grandis HOM05D000358 ORTHO05D009346 3.5e-39 165.6 160 54.4
Zm00001eb054110 Zea mays HOM05D000358 ORTHO05D009346 3.5e-39 165.6 109 69.7
THA.LOC104801239 Tarenaya hassleriana HOM05D000358 ORTHO05D009346 1.3e-38 163.7 109 64.2
Os03g0701300 Oryza sativa ssp. japonica HOM05D000358 ORTHO05D009346 4.2e-37 158.7 100 75.0
vmacro02584 Vaccinium macrocarpon HOM05D000358 ORTHO05D009346 1.2e-36 157.1 99 75.8
C09p02250 Brassica napus HOM05D000358 ORTHO05D009346 3.0e-35 152.5 148 52.0
HPP92_009591 Vanilla planifolia HOM05D002842 ORTHO05D003177 4.0e-35 152.1 164 51.2
COL.COLO4_09074 Corchorus olitorius HOM05D000358 ORTHO05D009346 1.5e-34 150.2 191 49.2
VMungo1383G1528 Vigna mungo HOM05D000358 ORTHO05D009346 2.0e-34 149.8 169 50.9
Aa31LG5G2370 Aethionema arabicum HOM05D000358 ORTHO05D009346 3.4e-34 149.1 115 60.9
Hma1.2p1_0822F.1_g224410 Hydrangea macrophylla HOM05D000358 ORTHO05D009346 7.5e-34 147.9 95 70.5
Hma1.2p1_0822F.1_g224420 Hydrangea macrophylla HOM05D000358 ORTHO05D009346 8.3e-33 144.4 89 74.2
Lalb_Chr01g0020121 Lupinus albus HOM05D000358 ORTHO05D009346 3.5e-31 139.0 98 62.2
Pp3c26_14500 Physcomitrium patens HOM05D000358 ORTHO05D009346 1.7e-30 136.7 118 51.7
Sc17g0001440 Simmondsia chinensis HOM05D000358 ORTHO05D009346 3.8e-30 135.6 98 68.4
SMO340G0322 Selaginella moellendorffii HOM05D000104 ORTHO05D004059 3.2e-29 132.5 129 50.4
Mapoly0004s0031 Marchantia polymorpha HOM05D000358 ORTHO05D009346 7.2e-29 131.3 105 56.2
SMO180G0003 Selaginella moellendorffii HOM05D000358 ORTHO05D009346 9.5e-29 131.0 94 59.6
ATR0332G065 Amborella trichopoda HOM05D000358 ORTHO05D009346 1.6e-28 130.2 83 68.7
Atru.BG.13.p Acer truncatum HOM05D000358 ORTHO05D009346 3.6e-28 129.0 97 61.9
Psat3g063840 Pisum sativum HOM05D000358 ORTHO05D009346 8.0e-28 127.9 121 55.4
Haze_04693 Corylus avellana HOM05D000358 ORTHO05D009346 3.0e-27 125.9 132 53.8
CDE02G2742 Ceratophyllum demersum HOM05D006420 ORTHO05D008009 4.0e-27 125.6 96 62.5
ClCG07G000330 Citrullus lanatus HOM05D000358 ORTHO05D009346 6.3e-25 118.2 157 47.1
AagrBONN_evm.TU.Sc2ySwM_362.2722 Anthoceros agrestis HOM05D000358 ORTHO05D009346 5.0e-22 108.6 76 60.5
Eucgr.L00778 Eucalyptus grandis HOM05D000358 ORTHO05D009346 7.3e-21 104.8 72 63.9
unitig_899.g15068 Utricularia gibba HOM05D000454 ORTHO05D000591 3.0e-19 99.4 75 60.0
Oeu029468.1 Olea europaea HOM05D000358 ORTHO05D009346 7.0e-16 88.2 101 54.5
Eucgr.C01960 Eucalyptus grandis HOM05D000358 ORTHO05D009346 3.0e-14 82.8 59 61.0
Ah.11g050550 Amaranthus hybridus HOM05D000358 ORTHO05D009346 2.1e-12 76.6 175 37.1
QL12p021343 Quercus lobata HOM05D000358 ORTHO05D009346 1.4e-11 73.9 100 52.0
MELO3C014393.2 Cucumis melo HOM05D000358 ORTHO05D009346 3.1e-11 72.8 97 49.5
Nn1g02275 Nelumbo nucifera HOM05D000358 ORTHO05D009346 7.5e-10 68.2 92 48.9
FAN20G1711 Fragaria x ananassa HOM05D000358 ORTHO05D009346 9.8e-10 67.8 123 35.8


User provided reference genes

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