Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004301g0080 Nicotiana tabacum HOM05D005624 ORTHO05D006896 6.2e-114 414.1 200 100.0
Nitab4.5_0000069g0230 Nicotiana tabacum HOM05D005624 ORTHO05D006896 2.4e-110 402.1 200 97.0
Peaxi162Scf00021g02113 Petunia axillaris HOM05D005624 ORTHO05D006896 3.8e-87 325.1 196 80.6
Solyc01g008220.3 Solanum lycopersicum HOM05D005624 ORTHO05D006896 6.3e-74 281.2 187 75.4
Peaxi162Scf00334g00119 Petunia axillaris HOM05D005624 ORTHO05D006896 2.6e-72 275.8 202 67.8
PGSC0003DMG400029983 Solanum tuberosum HOM05D005624 ORTHO05D006896 5.0e-71 271.6 196 69.4
CAN.G39.18 Capsicum annuum HOM05D005624 ORTHO05D006896 1.4e-70 270.0 196 68.4
Nitab4.5_0011777g0020 Nicotiana tabacum HOM05D005624 ORTHO05D006896 7.9e-69 264.2 197 68.0
Nitab4.5_0001089g0030 Nicotiana tabacum HOM05D005624 ORTHO05D006896 1.8e-68 263.1 197 68.0
Sopen02g002020 Solanum pennellii HOM05D005624 ORTHO05D006896 3.0e-68 262.3 196 66.3
Solyc02g005603.1 Solanum lycopersicum HOM05D005624 ORTHO05D006896 2.6e-67 259.2 196 65.8
MSTRG.8074 Avicennia marina HOM05D005624 ORTHO05D006896 1.3e-66 256.9 208 63.5
PGR119G0553 Punica granatum HOM05D005624 ORTHO05D006896 1.3e-66 256.9 205 64.4
Peaxi162Scf00681g00118 Petunia axillaris HOM05D005624 ORTHO05D006896 1.7e-66 256.5 197 66.5
CiPaw.05G096300 Carya illinoinensis HOM05D005624 ORTHO05D006896 2.2e-66 256.1 206 66.0
TAR622G0071 Trochodendron aralioides HOM05D005624 ORTHO05D006896 2.8e-66 255.8 208 64.4
Prupe.1G209600 Prunus persica HOM05D005624 ORTHO05D006896 6.3e-66 254.6 202 63.9
CANSAT25G1757 Cannabis sativa HOM05D005624 ORTHO05D006896 8.2e-66 254.2 209 63.2
ClCG10G013180 Citrullus lanatus HOM05D005624 ORTHO05D006896 8.2e-66 254.2 203 64.0
PSO478G3843 Papaver somniferum HOM05D005624 ORTHO05D006896 1.4e-65 253.4 210 63.3
Cfa020947 Carpinus fangiana HOM05D005624 ORTHO05D006896 1.8e-65 253.1 205 62.9
Haze_19383 Corylus avellana HOM05D005624 ORTHO05D006896 1.8e-65 253.1 205 62.9
MD13G1135700 Malus domestica HOM05D005624 ORTHO05D006896 3.1e-65 252.3 203 61.6
Ah.03g134040 Amaranthus hybridus HOM05D005624 ORTHO05D006896 9.1e-65 250.8 196 65.8
QL03p047013 Quercus lobata HOM05D005624 ORTHO05D006896 9.1e-65 250.8 205 64.9
Actinidia33983 Actinidia chinensis HOM05D005624 ORTHO05D006896 1.6e-64 250.0 205 63.4
Sabra01G0051200 Salix brachista HOM05D005624 ORTHO05D006896 2.0e-64 249.6 204 63.7
Sed0005404 Sechium edule HOM05D005624 ORTHO05D006896 3.5e-64 248.8 203 63.5
PSO017G6046 Papaver somniferum HOM05D005624 ORTHO05D006896 5.9e-64 248.1 210 62.4
Cc11_g14800 Coffea canephora HOM05D005624 ORTHO05D006896 7.7e-64 247.7 204 62.3
CsaV3_3G043430 Cucumis sativus L. HOM05D005624 ORTHO05D006896 7.7e-64 247.7 203 63.1
MD16G1131300 Malus domestica HOM05D005624 ORTHO05D006896 7.7e-64 247.7 204 60.8
Sc17g0003450 Simmondsia chinensis HOM05D005624 ORTHO05D006896 7.7e-64 247.7 204 62.7
Atru.chr12.1491 Acer truncatum HOM05D005624 ORTHO05D006896 1.0e-63 247.3 204 63.7
Oeu032685.1 Olea europaea HOM05D005624 ORTHO05D006896 1.0e-63 247.3 206 63.1
AUR62008562 Chenopodium quinoa HOM05D005624 ORTHO05D006896 1.3e-63 246.9 201 63.7
Migut.L00899 Erythranthe guttata HOM05D005624 ORTHO05D006896 1.7e-63 246.5 202 61.9
PGSC0003DMG402032565 Solanum tuberosum HOM05D005624 ORTHO05D006896 1.7e-63 246.5 197 64.5
Eucgr.J01702 Eucalyptus grandis HOM05D005624 ORTHO05D006896 2.2e-63 246.1 205 61.5
Solyc04g009190.3 Solanum lycopersicum HOM05D005624 ORTHO05D006896 2.9e-63 245.7 197 63.5
Aqoxy3G01649 Aquilegia oxysepala HOM05D005624 ORTHO05D006896 3.8e-63 245.4 206 61.7
TWI75G1298 Tripterygium wilfordii HOM05D005624 ORTHO05D006896 3.8e-63 245.4 208 63.0
Ciclev10005917m.g Citrus clementina HOM05D005624 ORTHO05D006896 6.5e-63 244.6 202 61.4
Potri.003G158200 Populus trichocarpa HOM05D005624 ORTHO05D006896 8.5e-63 244.2 203 61.1
AUR62033199 Chenopodium quinoa HOM05D005624 ORTHO05D006896 1.1e-62 243.8 201 62.7
COL.COLO4_32213 Corchorus olitorius HOM05D005624 ORTHO05D006896 1.1e-62 243.8 205 61.5
Hund05398 Selenicereus undatus HOM05D005624 ORTHO05D006896 1.1e-62 243.8 200 63.0
Sopen04g004320 Solanum pennellii HOM05D005624 ORTHO05D006896 1.1e-62 243.8 197 63.5
CSS0016097 Camellia sinensis var. sinensis HOM05D005624 ORTHO05D006896 1.5e-62 243.4 205 61.5
Potri.001G072600 Populus trichocarpa HOM05D005624 ORTHO05D006896 1.5e-62 243.4 204 61.8
Sed0018373 Sechium edule HOM05D005624 ORTHO05D006896 3.2e-62 242.3 201 62.2
PGSC0003DMG400016363 Solanum tuberosum HOM05D005624 ORTHO05D006896 3.2e-62 242.3 175 74.3
TWI18G0768 Tripterygium wilfordii HOM05D005624 ORTHO05D006896 4.2e-62 241.9 207 60.9
BcaB01g05468 Brassica carinata HOM05D005624 ORTHO05D006896 5.5e-62 241.5 203 61.6
Manes.08G097600 Manihot esculenta HOM05D005624 ORTHO05D006896 9.4e-62 240.7 206 62.1
SalBow2G1530 Salvia bowleyana HOM05D005624 ORTHO05D006896 1.6e-61 240.0 204 61.3
EL10Ac7g17520 Beta vulgaris HOM05D005624 ORTHO05D006896 2.1e-61 239.6 200 62.5
Hma1.2p1_0562F.1_g179050 Hydrangea macrophylla HOM05D005624 ORTHO05D006896 2.1e-61 239.6 207 60.9
BraA03t09846Z Brassica rapa HOM05D005624 ORTHO05D006896 3.6e-61 238.8 206 60.7
GSVIVG01001144001 Vitis vinifera HOM05D005624 ORTHO05D006896 3.6e-61 238.8 196 63.8
AL6G22400 Arabidopsis lyrata HOM05D005624 ORTHO05D006896 6.1e-61 238.0 207 60.4
CARHR201540 Cardamine hirsuta HOM05D005624 ORTHO05D006896 8.0e-61 237.7 206 60.2
C03p05810 Brassica napus HOM05D000602 ORTHO05D006896 1.0e-60 237.3 199 61.3
BolC3t13101H Brassica oleracea HOM05D005624 ORTHO05D006896 1.0e-60 237.3 199 61.3
AT5G11680 Arabidopsis thaliana HOM05D005624 ORTHO05D006896 1.4e-60 236.9 207 59.9
FvH4_4g21930 Fragaria vesca HOM05D005624 ORTHO05D006896 1.4e-60 236.9 203 60.1
Gohir.D08G238100 Gossypium hirsutum HOM05D005624 ORTHO05D006896 1.8e-60 236.5 206 61.7
Gorai.004G253600 Gossypium raimondii HOM05D005624 ORTHO05D006896 2.3e-60 236.1 206 61.2
Lj3A918T40 Lonicera japonica HOM05D005624 ORTHO05D006896 2.3e-60 236.1 195 61.5
Rhsim12G0090500 Rhododendron simsii HOM05D005624 ORTHO05D006896 2.3e-60 236.1 205 60.0
RcHm_v2.0_Chr4g0428141 Rosa chinensis HOM05D005624 ORTHO05D006896 3.0e-60 235.7 203 60.6
Sp6g31930 Schrenkiella parvula HOM05D005624 ORTHO05D006896 4.0e-60 235.3 207 59.4
Duzib128G1380 Durio zibethinus HOM05D005624 ORTHO05D006896 5.2e-60 235.0 206 59.7
Gohir.A08G221500 Gossypium hirsutum HOM05D005624 ORTHO05D006896 6.7e-60 234.6 202 61.9
Carub.0006s1018 Capsella rubella HOM05D005624 ORTHO05D006896 8.8e-60 234.2 207 58.9
FAN17G0486 Fragaria x ananassa HOM05D005624 ORTHO05D006896 1.5e-59 233.4 203 59.6
Aa31LG3G15530 Aethionema arabicum HOM05D000602 ORTHO05D001147 2.0e-59 233.0 209 58.9
BolC2t06481H Brassica oleracea HOM05D005624 ORTHO05D006896 2.0e-59 233.0 206 59.2
CiPaw.06G112400 Carya illinoinensis HOM05D005624 ORTHO05D006896 2.0e-59 233.0 218 59.6
DCAR_028131 Daucus carota HOM05D005624 ORTHO05D006896 2.0e-59 233.0 202 59.9
BcaC03g13386 Brassica carinata HOM05D005624 ORTHO05D006896 2.6e-59 232.6 207 59.4
Thecc.05G235200 Theobroma cacao HOM05D005624 ORTHO05D006896 2.6e-59 232.6 206 59.2
THA.LOC104811263 Tarenaya hassleriana HOM05D005624 ORTHO05D006896 3.3e-59 232.3 206 58.3
VMungo0251G1277 Vigna mungo HOM05D005624 ORTHO05D006896 4.4e-59 231.9 201 59.7
Thhalv10014678m.g Eutrema salsugineum HOM05D005624 ORTHO05D006896 5.7e-59 231.5 209 58.9
Medtr8g070860 Medicago truncatula HOM05D005624 ORTHO05D006896 5.7e-59 231.5 201 58.7
Lj4g0021292 Lotus japonicus HOM05D005624 ORTHO05D006896 9.7e-59 230.7 202 59.4
ATR0582G264 Amborella trichopoda HOM05D005624 ORTHO05D006896 1.3e-58 230.3 209 57.9
Glyma.08G266400 Glycine max HOM05D005624 ORTHO05D006896 1.7e-58 229.9 201 57.7
Zm00001eb318180 Zea mays HOM05D005624 ORTHO05D006896 2.8e-58 229.2 200 61.0
Psat4g111480 Pisum sativum HOM05D005624 ORTHO05D006896 4.8e-58 228.4 197 57.9
TPR.G6115 Trifolium pratense HOM05D005624 ORTHO05D006896 8.2e-58 227.6 205 58.5
Glyma.16G101200 Glycine max HOM05D005624 ORTHO05D006896 1.4e-57 226.9 201 57.2
unitig_22.g6367 Utricularia gibba HOM05D005624 ORTHO05D006896 1.8e-57 226.5 202 58.4
HPP92_013550 Vanilla planifolia HOM05D005624 ORTHO05D006896 3.1e-57 225.7 201 59.7
Phvul.003G274200 Phaseolus vulgaris HOM05D005624 ORTHO05D006896 4.1e-57 225.3 204 56.9
ECA236G4393 Erigeron canadensis HOM05D000127 ORTHO05D000243 9.1e-57 224.2 195 58.5
Zm00001eb102600 Zea mays HOM05D005624 ORTHO05D006896 1.2e-56 223.8 199 58.8
Lsat_1_v5_gn_1_78160 Lactuca sativa HOM05D005624 ORTHO05D006896 4.5e-56 221.9 200 58.5
arahy.Tifrunner.gnm1.ann1.CA7SJ1 Arachis hypogaea HOM05D005624 ORTHO05D006896 1.7e-55 219.9 201 57.2
arahy.Tifrunner.gnm1.ann1.YB0CZG Arachis hypogaea HOM05D005624 ORTHO05D006896 1.7e-55 219.9 201 57.2
HanXRQChr10g0312121 Helianthus annuus HOM05D005624 ORTHO05D006896 2.2e-55 219.5 202 57.4
unitig_8.g3112 Utricularia gibba HOM05D005624 ORTHO05D006896 2.1e-53 213.0 228 52.2
MELO3C026760.2 Cucumis melo HOM05D005624 ORTHO05D006896 6.8e-52 208.0 169 63.3
SMO164G0111 Selaginella moellendorffii HOM05D005624 ORTHO05D006896 8.8e-52 207.6 196 53.1
A03p05080 Brassica napus HOM05D000602 ORTHO05D006896 1.4e-49 200.3 183 57.9
Zm00001eb071390 Zea mays HOM05D005624 ORTHO05D006896 1.7e-47 193.4 160 64.4
Pp3c7_9270 Physcomitrium patens HOM05D005624 ORTHO05D006896 2.9e-47 192.6 206 49.0
Lsat_1_v5_gn_5_173840 Lactuca sativa HOM05D005624 ORTHO05D006896 6.5e-47 191.4 190 54.2
HanXRQChr01g0012261 Helianthus annuus HOM05D005624 ORTHO05D006896 1.9e-46 189.9 192 53.1
vmacro16032 Vaccinium macrocarpon HOM05D005624 ORTHO05D006896 4.2e-46 188.7 161 60.9
Duzib177G0503 Durio zibethinus HOM05D005624 ORTHO05D006896 3.6e-45 185.7 204 51.0
AagrBONN_evm.TU.Sc2ySwM_117.3158 Anthoceros agrestis HOM05D005624 ORTHO05D006896 1.0e-44 184.1 200 48.0
Mapoly0097s0090 Marchantia polymorpha HOM05D005624 ORTHO05D006896 3.4e-43 179.1 201 48.3
CAN.G619.7 Capsicum annuum HOM05D005624 ORTHO05D006896 6.3e-42 174.9 144 65.3
MBI11_g04265_MAGBIO Magnolia biondii HOM05D005624 ORTHO05D006896 1.2e-40 170.6 159 54.7
Dinv02966 Davidia involucrata HOM05D005624 ORTHO05D006896 5.0e-39 165.2 150 59.3
Gohir.A13G159151 Gossypium hirsutum HOM05D005624 ORTHO05D006896 1.5e-35 153.7 137 59.1
CAN.G282.51 Capsicum annuum HOM05D005624 ORTHO05D006896 2.0e-35 153.3 201 47.3
Gorai.013G198700 Gossypium raimondii HOM05D005624 ORTHO05D006896 2.6e-35 152.9 141 56.7
MBI07_g41258_MAGBIO Magnolia biondii HOM05D005624 ORTHO05D006896 1.3e-34 150.6 134 60.4
Lalb_Chr05g0228971 Lupinus albus HOM05D005624 ORTHO05D006896 4.9e-34 148.7 124 58.1
Migut.L00595 Erythranthe guttata HOM05D005624 ORTHO05D006896 3.5e-32 142.5 97 68.0
Zm00001eb052330 Zea mays HOM05D005624 ORTHO05D006896 3.6e-29 132.5 121 60.3
Zm00001eb036000 Zea mays HOM05D005624 ORTHO05D006896 4.7e-29 132.1 121 60.3
CBR_g24147 Chara braunii HOM05D005624 ORTHO05D006896 2.3e-28 129.8 145 47.6
Cre03.g189100 Chlamydomonas reinhardtii HOM05D005624 ORTHO05D006896 2.2e-26 123.2 178 38.8
C02p05330 Brassica napus HOM05D005624 ORTHO05D006896 2.1e-21 106.7 96 58.3
Cc10_g16310 Coffea canephora HOM05D005624 ORTHO05D006896 5.8e-19 98.6 75 64.0
SEGI_14660 Sequoiadendron giganteum HOM05D005624 ORTHO05D006896 2.2e-18 96.7 59 72.9
Cc08_g00010 Coffea canephora HOM05D005624 ORTHO05D006896 1.9e-17 93.6 75 61.3
CSS0031660 Camellia sinensis var. sinensis HOM05D005624 ORTHO05D006896 9.5e-14 81.3 99 45.5
Cc06_g22650 Coffea canephora HOM05D005624 ORTHO05D006896 1.1e-12 77.8 75 56.0
Dinv02968 Davidia involucrata HOM05D005624 ORTHO05D006896 6.0e-08 62.0 57 52.6


User provided reference genes

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