Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004295g0040 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.5e-101 372.9 185 100.0
Nitab4.5_0003586g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.3e-69 265.0 202 72.8
Nitab4.5_0006936g0070 Nicotiana tabacum HOM05D006864 ORTHO05D002765 8.1e-68 260.8 194 74.2
Nitab4.5_0001947g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 5.5e-64 248.1 199 65.8
Nitab4.5_0001212g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.0e-62 243.8 199 65.8
Nitab4.5_0005249g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.0e-62 243.8 194 71.1
Nitab4.5_0003674g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.6e-58 229.2 190 69.5
Nitab4.5_0004824g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.4e-56 223.4 186 68.8
Nitab4.5_0010143g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.1e-51 207.2 153 74.5
Nitab4.5_0005376g0100 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.7e-49 199.9 184 62.5
Nitab4.5_0010096g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 5.0e-49 198.4 119 85.7
Nitab4.5_0000231g0410 Nicotiana tabacum HOM05D006864 ORTHO05D002765 9.3e-48 194.1 241 49.4
Nitab4.5_0007565g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.3e-46 190.3 207 56.5
Nitab4.5_0000138g0190 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.8e-27 126.7 74 81.1
Nitab4.5_0004728g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.5e-24 117.1 195 38.5
Nitab4.5_0005412g0060 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.5e-24 117.1 79 68.4
Nitab4.5_0008359g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.5e-24 117.1 195 37.4
Nitab4.5_0007303g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.1e-23 113.2 193 39.4
Nitab4.5_0000036g0400 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.7e-23 112.8 199 38.2
Nitab4.5_0001329g0170 Nicotiana tabacum HOM05D006864 ORTHO05D002765 6.1e-23 111.7 109 57.8
Nitab4.5_0002279g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.0e-22 110.9 212 35.4
Nitab4.5_0013458g0010 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.8e-22 110.2 114 54.4
Nitab4.5_0003887g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.5e-21 107.1 212 36.3
Nitab4.5_0001410g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.3e-20 104.0 60 88.3
Nitab4.5_0014828g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 6.3e-20 101.7 186 37.6
Nitab4.5_0000890g0220 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.4e-19 99.8 203 36.0
Solyc10g052716.1 Solanum lycopersicum HOM05D000017 ORTHO05D002765 5.3e-19 98.6 260 28.8
Nitab4.5_0002806g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.0e-18 96.7 197 36.0
Nitab4.5_0003114g0100 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.7e-18 96.3 156 37.8
Sopen10g023510 Solanum pennellii HOM05D000017 ORTHO05D000013 1.3e-17 94.0 260 27.7
Nitab4.5_0006009g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.7e-17 93.6 196 31.6
Nitab4.5_0027852g0010 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.5e-16 90.5 193 32.1
Nitab4.5_0007005g0050 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.2e-16 89.4 202 35.1
Nitab4.5_0002297g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.6e-15 87.0 189 34.4
Nitab4.5_0000730g0100 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.1e-15 86.7 161 37.9
Nitab4.5_0001173g0060 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.1e-15 86.7 103 44.7
Nitab4.5_0009921g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.7e-15 86.3 101 41.6
Nitab4.5_0000721g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.6e-15 85.9 195 32.8
Nitab4.5_0003966g0040 Nicotiana tabacum HOM05D008401 ORTHO05D002765 3.6e-15 85.9 194 32.0
Nitab4.5_0013596g0040 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.6e-15 85.9 103 44.7
Nitab4.5_0000034g0050 Nicotiana tabacum HOM05D008401 ORTHO05D002765 4.7e-15 85.5 200 33.0
Nitab4.5_0000584g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 6.1e-15 85.1 175 35.4
Nitab4.5_0002430g0060 Nicotiana tabacum HOM05D008401 ORTHO05D002765 6.1e-15 85.1 184 31.5
Nitab4.5_0005092g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 6.1e-15 85.1 132 38.6
Nitab4.5_0004917g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.4e-14 84.0 198 33.3
Nitab4.5_0001863g0150 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.8e-14 83.6 101 44.6
Nitab4.5_0002534g0090 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.8e-14 83.6 192 33.3
Nitab4.5_0007069g0020 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.8e-14 83.6 193 32.6
Nitab4.5_0012915g0010 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.8e-14 83.6 193 31.1
Nitab4.5_0000374g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.3e-14 83.2 110 40.0
Nitab4.5_0000566g0220 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.3e-14 83.2 86 51.2
Nitab4.5_0001614g0160 Nicotiana tabacum HOM05D008401 ORTHO05D002765 4.0e-14 82.4 185 31.9
Solyc09g150133.1 Solanum lycopersicum HOM05D007248 ORTHO05D002765 4.0e-14 82.4 187 31.6
Sopen05g022560 Solanum pennellii HOM05D000017 ORTHO05D000013 4.0e-14 82.4 188 30.9
Nitab4.5_0003911g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 5.2e-14 82.0 103 41.7
Nitab4.5_0001968g0150 Nicotiana tabacum HOM05D007248 ORTHO05D002765 6.8e-14 81.6 200 29.0
Nitab4.5_0000403g0060 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.5e-13 80.5 185 33.0
Nitab4.5_0002993g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.6e-13 79.7 199 32.7
Nitab4.5_0006628g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.6e-13 79.7 202 33.7
Nitab4.5_0000423g0010 Nicotiana tabacum HOM05D007248 ORTHO05D002765 4.4e-13 79.0 197 33.5
Nitab4.5_0004899g0060 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.4e-13 79.0 151 36.4
Nitab4.5_0003288g0080 Nicotiana tabacum HOM05D008401 ORTHO05D002765 7.5e-13 78.2 193 31.6
Nitab4.5_0000814g0120 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.3e-12 77.4 202 32.2
Nitab4.5_0003408g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.3e-12 77.4 190 31.1
Nitab4.5_0000786g0280 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.2e-12 76.6 179 34.6
Nitab4.5_0006179g0060 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.2e-12 76.6 202 33.7
Nitab4.5_0000829g0130 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.8e-12 76.3 160 35.0
Nitab4.5_0000832g0070 Nicotiana tabacum HOM05D008401 ORTHO05D002765 2.8e-12 76.3 176 30.7
Nitab4.5_0000425g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 6.3e-12 75.1 170 34.7
Nitab4.5_0000697g0250 Nicotiana tabacum HOM05D006864 ORTHO05D002765 6.3e-12 75.1 103 40.8
Nitab4.5_0001329g0180 Nicotiana tabacum HOM05D006864 ORTHO05D002765 6.3e-12 75.1 40 92.5
Nitab4.5_0003767g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 8.3e-12 74.7 191 31.9
Nitab4.5_0010096g0100 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.1e-11 74.3 40 95.0
Nitab4.5_0000516g0080 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.4e-11 73.9 198 31.3
Nitab4.5_0011275g0040 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.8e-11 73.6 183 31.1
Nitab4.5_0002951g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.4e-11 73.2 190 31.1
Nitab4.5_0010494g0010 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.4e-11 73.2 119 43.7
Sopen01g015850 Solanum pennellii HOM05D000004 ORTHO05D000002 2.4e-11 73.2 160 31.9
Nitab4.5_0007629g0010 Nicotiana tabacum HOM05D006864 ORTHO05D002765 5.4e-11 72.0 41 87.8
Nitab4.5_0000906g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.0e-10 70.1 113 40.7
Nitab4.5_0001816g0240 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.0e-10 70.1 186 29.6
Nitab4.5_0002944g0070 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.7e-10 69.7 100 41.0
Nitab4.5_0004449g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 7.7e-10 68.2 166 33.7
Nitab4.5_0000228g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.0e-09 67.8 155 32.9
Sopen02g001070 Solanum pennellii HOM05D000017 ORTHO05D000013 1.0e-09 67.8 189 28.0
Sopen02g032130 Solanum pennellii HOM05D000629 ORTHO05D000013 1.0e-09 67.8 189 28.0
Sopen12g019990 Solanum pennellii HOM05D000017 ORTHO05D000013 1.0e-09 67.8 189 28.0
Nitab4.5_0006698g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.3e-09 67.4 170 32.4
Nitab4.5_0012894g0030 Nicotiana tabacum HOM05D006864 ORTHO05D000013 1.3e-09 67.4 183 27.9
Nitab4.5_0001591g0060 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.7e-09 67.0 102 36.3
Sopen06g002940 Solanum pennellii HOM05D000017 ORTHO05D000013 1.7e-09 67.0 189 28.0
Nitab4.5_0001094g0180 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.3e-09 66.6 184 30.4
Sopen05g006380 Solanum pennellii HOM05D000017 ORTHO05D000013 2.3e-09 66.6 189 27.5
Nitab4.5_0006248g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.9e-09 66.2 101 36.6
Nitab4.5_0008791g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.9e-09 66.2 192 30.2
Sopen09g026440 Solanum pennellii HOM05D000017 ORTHO05D000013 2.9e-09 66.2 176 29.0
Nitab4.5_0002461g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 5.0e-09 65.5 164 32.3
Nitab4.5_0003089g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 5.0e-09 65.5 196 29.6
Sopen06g004330 Solanum pennellii HOM05D000017 ORTHO05D000013 5.0e-09 65.5 189 27.5
Nitab4.5_0001439g0140 Nicotiana tabacum HOM05D008401 ORTHO05D002765 6.5e-09 65.1 193 28.5
Sopen10g005080 Solanum pennellii HOM05D000017 ORTHO05D000013 6.5e-09 65.1 189 27.5
CANSAT01G2679 Cannabis sativa HOM05D010396 ORTHO05D002765 1.1e-08 64.3 102 34.3
CANSAT25G3317 Cannabis sativa HOM05D010396 ORTHO05D002765 1.1e-08 64.3 102 34.3
CANSAT64G2574 Cannabis sativa HOM05D010396 ORTHO05D002765 1.1e-08 64.3 102 34.3
CANSAT78G0529 Cannabis sativa HOM05D010396 ORTHO05D002765 1.1e-08 64.3 102 34.3
Nitab4.5_0024513g0010 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.5e-08 63.9 195 29.7
CANSAT78G0321 Cannabis sativa HOM05D010396 ORTHO05D002765 1.9e-08 63.5 241 24.1
Nitab4.5_0004770g0070 Nicotiana tabacum HOM05D008401 ORTHO05D002765 2.5e-08 63.2 102 34.3
Nitab4.5_0004510g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.2e-08 62.8 148 32.4
Nitab4.5_0006001g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.2e-08 62.8 98 39.8
CANSAT21G0992 Cannabis sativa HOM05D010396 ORTHO05D002765 4.2e-08 62.4 241 25.7
CANSAT78G0171 Cannabis sativa HOM05D000017 ORTHO05D000013 4.2e-08 62.4 230 23.9
Nitab4.5_0000008g0780 Nicotiana tabacum HOM05D006864 ORTHO05D002765 5.5e-08 62.0 171 26.9
Nitab4.5_0005474g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 7.2e-08 61.6 89 39.3
Nitab4.5_0006375g0060 Nicotiana tabacum HOM05D000017 ORTHO05D002765 7.2e-08 61.6 113 38.9
DCAR_015925 Daucus carota HOM05D006864 ORTHO05D002765 9.5e-08 61.2 101 34.7
Sopen10g022230 Solanum pennellii HOM05D000017 ORTHO05D000013 9.5e-08 61.2 184 27.7
CANSAT35G0692 Cannabis sativa HOM05D010396 ORTHO05D002765 1.2e-07 60.8 237 23.2
Nitab4.5_0004038g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.2e-07 60.8 92 38.0
Sopen11g019130 Solanum pennellii HOM05D000047 ORTHO05D000589 1.2e-07 60.8 178 27.5
Nitab4.5_0007029g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.6e-07 60.5 98 33.7
Nitab4.5_0020188g0010 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.6e-07 60.5 169 27.8
Solyc10g047821.1 Solanum lycopersicum HOM05D007248 ORTHO05D002765 1.6e-07 60.5 95 30.5
Sopen09g015530 Solanum pennellii HOM05D006864 ORTHO05D002765 2.1e-07 60.1 96 35.4
Nitab4.5_0006446g0050 Nicotiana tabacum HOM05D008401 ORTHO05D002765 2.8e-07 59.7 139 31.7
Nitab4.5_0001140g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.6e-07 59.3 195 28.2
Nitab4.5_0012202g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 6.1e-07 58.5 56 51.8
Sopen03g030620 Solanum pennellii HOM05D000017 ORTHO05D000013 6.1e-07 58.5 184 26.6
Sopen09g007640 Solanum pennellii HOM05D000017 ORTHO05D000013 6.1e-07 58.5 190 26.3
Nitab4.5_0000227g0040 Nicotiana tabacum HOM05D006864 ORTHO05D011903 8.0e-07 58.2 50 60.0
CANSAT11G2629 Cannabis sativa HOM05D000017 ORTHO05D000013 1.4e-06 57.4 203 24.1
Nitab4.5_0001150g0040 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.4e-06 57.4 46 67.4
Nitab4.5_0003869g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.4e-06 57.4 55 49.1
Nitab4.5_0000904g0120 Nicotiana tabacum HOM05D009153 ORTHO05D011903 3.0e-06 56.2 52 63.5
Sopen09g012340 Solanum pennellii HOM05D006864 ORTHO05D000013 3.0e-06 56.2 194 26.3
Nitab4.5_0001259g0140 Nicotiana tabacum HOM05D008401 ORTHO05D002765 4.0e-06 55.8 169 30.2
Nitab4.5_0004697g0110 Nicotiana tabacum HOM05D006864 ORTHO05D000013 4.0e-06 55.8 190 26.3
Nitab4.5_0007565g0070 Nicotiana tabacum HOM05D000017 ORTHO05D002765 5.2e-06 55.5 136 32.4
CANSAT25G1145 Cannabis sativa HOM05D000017 ORTHO05D000013 6.8e-06 55.1 204 23.5
Nitab4.5_0000584g0070 Nicotiana tabacum HOM05D006864 ORTHO05D000013 6.8e-06 55.1 43 58.1
Nitab4.5_0005199g0100 Nicotiana tabacum HOM05D006864 ORTHO05D000013 6.8e-06 55.1 96 32.3
Oeu009493.1 Olea europaea HOM05D012404 ORTHO05D002765 6.8e-06 55.1 216 23.6
Peaxi162Scf00106g02222 Petunia axillaris HOM05D006864 ORTHO05D002765 6.8e-06 55.1 97 32.0
Peaxi162Scf00184g00211 Petunia axillaris HOM05D006864 ORTHO05D002765 6.8e-06 55.1 97 32.0


User provided reference genes

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