Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004295g0010 Nicotiana tabacum HOM05D005529 ORTHO05D006800 1.8e-130 469.2 226 100.0
Nitab4.5_0004541g0010 Nicotiana tabacum HOM05D005529 ORTHO05D006800 2.3e-125 452.2 221 98.6
Peaxi162Scf00160g01637 Petunia axillaris HOM05D005529 ORTHO05D006800 7.5e-116 420.6 223 93.3
Solyc12g056770.3 Solanum lycopersicum HOM05D005529 ORTHO05D006800 5.0e-112 407.9 223 91.0
Sopen12g029450 Solanum pennellii HOM05D005529 ORTHO05D006800 5.0e-112 407.9 223 91.0
CAN.G26.7 Capsicum annuum HOM05D005529 ORTHO05D006800 8.6e-112 407.1 223 90.1
vmacro21201 Vaccinium macrocarpon HOM05D005529 ORTHO05D006800 2.3e-109 399.1 222 86.9
CSS0023417 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 4.9e-107 391.3 223 86.1
Cc10_g06360 Coffea canephora HOM05D005529 ORTHO05D006800 6.4e-107 391.0 223 85.2
Actinidia15622 Actinidia chinensis HOM05D005529 ORTHO05D006800 1.1e-106 390.2 223 85.2
PGSC0003DMG400016963 Solanum tuberosum HOM05D005529 ORTHO05D006800 2.0e-105 386.0 268 75.4
Thecc.08G196300 Theobroma cacao HOM05D005529 ORTHO05D006800 1.0e-104 383.6 223 82.5
PGR042G1245 Punica granatum HOM05D005529 ORTHO05D006800 3.0e-104 382.1 223 83.0
Cpa.g.sc26.128 Carica papaya HOM05D005529 ORTHO05D006800 3.9e-104 381.7 223 82.5
GSVIVG01013675001 Vitis vinifera HOM05D005529 ORTHO05D006800 3.9e-104 381.7 223 82.1
Atru.chr13.1964 Acer truncatum HOM05D005529 ORTHO05D006800 6.6e-104 380.9 222 82.9
Lj4A706T78 Lonicera japonica HOM05D005529 ORTHO05D006800 6.6e-104 380.9 222 82.0
QL02p036323 Quercus lobata HOM05D005529 ORTHO05D006800 6.6e-104 380.9 221 83.7
QL02p036742 Quercus lobata HOM05D005529 ORTHO05D006800 1.5e-103 379.8 221 83.3
Eucgr.F02670 Eucalyptus grandis HOM05D005529 ORTHO05D006800 1.9e-103 379.4 223 81.2
MD05G1037000 Malus domestica HOM05D005529 ORTHO05D006800 1.9e-103 379.4 222 83.8
Prupe.8G045100 Prunus persica HOM05D005529 ORTHO05D006800 1.2e-102 376.7 222 82.9
RcHm_v2.0_Chr6g0273541 Rosa chinensis HOM05D005529 ORTHO05D006800 2.1e-102 375.9 222 82.0
Ciclev10002214m.g Citrus clementina HOM05D005529 ORTHO05D006800 3.6e-102 375.2 221 83.3
Manes.02G186100 Manihot esculenta HOM05D005529 ORTHO05D006800 3.6e-102 375.2 223 81.6
Potri.005G199600 Populus trichocarpa HOM05D005529 ORTHO05D006800 3.6e-102 375.2 215 83.7
THA.LOC104800098 Tarenaya hassleriana HOM05D005529 ORTHO05D006800 3.6e-102 375.2 223 82.1
CiPaw.15G011100 Carya illinoinensis HOM05D005529 ORTHO05D006800 6.2e-102 374.4 220 82.7
Psat6g189800 Pisum sativum HOM05D005529 ORTHO05D006800 6.2e-102 374.4 223 82.5
DCAR_019977 Daucus carota HOM05D005529 ORTHO05D006800 8.1e-102 374.0 217 82.5
Glyma.20G171800 Glycine max HOM05D005529 ORTHO05D006800 1.8e-101 372.9 222 82.0
Glyma.10G219900 Glycine max HOM05D005529 ORTHO05D006800 2.3e-101 372.5 222 81.5
SGA_v2.0_scaffold161G37858 Striga asiatica HOM05D005529 ORTHO05D006800 2.3e-101 372.5 223 82.1
Sabra05G0151800 Salix brachista HOM05D005529 ORTHO05D006800 3.1e-101 372.1 215 83.3
Migut.C00162 Erythranthe guttata HOM05D005529 ORTHO05D006800 4.0e-101 371.7 222 80.2
Migut.O00737 Erythranthe guttata HOM05D005529 ORTHO05D006800 4.0e-101 371.7 222 80.2
AUR62032105 Chenopodium quinoa HOM05D005529 ORTHO05D006800 5.2e-101 371.3 223 81.2
Thhalv10019028m.g Eutrema salsugineum HOM05D005529 ORTHO05D006800 1.2e-100 370.2 223 81.2
Medtr1g097380 Medicago truncatula HOM05D005529 ORTHO05D006800 1.2e-100 370.2 223 80.7
Lj5g0011658 Lotus japonicus HOM05D005529 ORTHO05D006800 1.5e-100 369.8 223 80.7
TAR381G0607 Trochodendron aralioides HOM05D005529 ORTHO05D006800 1.5e-100 369.8 216 82.9
AL2G31360 Arabidopsis lyrata HOM05D005529 ORTHO05D006800 4.4e-100 368.2 223 80.7
BcaC08g46609 Brassica carinata HOM05D005529 ORTHO05D006800 4.4e-100 368.2 223 80.7
A07p37940 Brassica napus HOM05D005529 ORTHO05D006800 4.4e-100 368.2 223 80.7
C06p45850 Brassica napus HOM05D005529 ORTHO05D006800 4.4e-100 368.2 223 80.7
BolC6t39637H Brassica oleracea HOM05D005529 ORTHO05D006800 4.4e-100 368.2 223 80.7
BraA07t31359Z Brassica rapa HOM05D005529 ORTHO05D006800 4.4e-100 368.2 223 80.7
CiPaw.16G006900 Carya illinoinensis HOM05D005529 ORTHO05D006800 4.4e-100 368.2 220 80.5
COL.COLO4_05242 Corchorus olitorius HOM05D005529 ORTHO05D006800 4.4e-100 368.2 223 79.8
Haze_17835 Corylus avellana HOM05D005529 ORTHO05D006800 4.4e-100 368.2 222 82.4
Haze_17841 Corylus avellana HOM05D005529 ORTHO05D006800 4.4e-100 368.2 222 82.4
Aqoxy6G00458 Aquilegia oxysepala HOM05D005529 ORTHO05D006800 5.8e-100 367.9 223 79.8
AUR62034931 Chenopodium quinoa HOM05D005529 ORTHO05D006800 5.8e-100 367.9 223 79.8
TWI34G1474 Tripterygium wilfordii HOM05D005529 ORTHO05D006800 5.8e-100 367.9 223 81.2
FvH4_2g12750 Fragaria vesca HOM05D005529 ORTHO05D006800 7.5e-100 367.5 222 79.7
FAN15G0152 Fragaria x ananassa HOM05D005529 ORTHO05D006800 7.5e-100 367.5 222 79.7
FAN27G2439 Fragaria x ananassa HOM05D005529 ORTHO05D006800 7.5e-100 367.5 222 79.7
AT1G71790 Arabidopsis thaliana HOM05D005529 ORTHO05D006800 9.8e-100 367.1 223 80.7
Hma1.2p1_0358F.1_g134920 Hydrangea macrophylla HOM05D005529 ORTHO05D006800 9.8e-100 367.1 222 80.6
Sc26g0003120 Simmondsia chinensis HOM05D005529 ORTHO05D006800 9.8e-100 367.1 223 78.5
Sp5g26810 Schrenkiella parvula HOM05D005529 ORTHO05D006800 1.7e-99 366.3 223 80.3
SpUn0095_0040 Schrenkiella parvula HOM05D005529 ORTHO05D006800 1.7e-99 366.3 223 80.3
Phvul.007G085400 Phaseolus vulgaris HOM05D005529 ORTHO05D006800 2.2e-99 365.9 223 80.7
MSTRG.965 Avicennia marina HOM05D005529 ORTHO05D006800 2.9e-99 365.5 223 78.9
Carub.0002s1855 Capsella rubella HOM05D005529 ORTHO05D006800 2.9e-99 365.5 223 79.8
Cfa018254 Carpinus fangiana HOM05D005529 ORTHO05D006800 6.4e-99 364.4 220 82.3
Oeu027223.1 Olea europaea HOM05D005529 ORTHO05D006800 6.4e-99 364.4 223 81.6
CsaV3_6G004830 Cucumis sativus L. HOM05D005529 ORTHO05D006800 8.3e-99 364.0 223 78.9
FAN24G1078 Fragaria x ananassa HOM05D005529 ORTHO05D006800 8.3e-99 364.0 222 79.3
TPR.G23153 Trifolium pratense HOM05D005529 ORTHO05D006800 8.3e-99 364.0 223 79.4
CANSAT25G1808 Cannabis sativa HOM05D005529 ORTHO05D006800 1.4e-98 363.2 222 78.8
Aa31LG4G8850 Aethionema arabicum HOM05D005529 ORTHO05D006800 2.4e-98 362.5 217 80.2
Ah.05g168410 Amaranthus hybridus HOM05D005529 ORTHO05D006800 5.4e-98 361.3 223 78.0
CSS0035962 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 7.1e-98 360.9 223 79.8
PSO675G2610 Papaver somniferum HOM05D005529 ORTHO05D006800 7.1e-98 360.9 218 79.8
Lalb_Chr21g0305631 Lupinus albus HOM05D005529 ORTHO05D006800 9.2e-98 360.5 223 78.9
Lalb_Chr06g0161811 Lupinus albus HOM05D005529 ORTHO05D006800 1.6e-97 359.8 223 79.4
Manes.18G096400 Manihot esculenta HOM05D005529 ORTHO05D006800 3.5e-97 358.6 223 78.5
arahy.Tifrunner.gnm1.ann1.MD2PB3 Arachis hypogaea HOM05D005529 ORTHO05D006800 6.0e-97 357.8 223 78.5
arahy.Tifrunner.gnm1.ann1.PZ5J07 Arachis hypogaea HOM05D005529 ORTHO05D006800 6.0e-97 357.8 223 78.5
CSS0031927 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 7.8e-97 357.5 223 78.9
PSO541G1243 Papaver somniferum HOM05D005529 ORTHO05D006800 1.0e-96 357.1 218 78.9
Sed0025527 Sechium edule HOM05D005529 ORTHO05D006800 1.0e-96 357.1 223 77.1
unitig_32.g11170 Utricularia gibba HOM05D005529 ORTHO05D006800 1.3e-96 356.7 223 78.9
VMungo0720G3143 Vigna mungo HOM05D005529 ORTHO05D006800 3.9e-96 355.1 223 78.9
ECA232G2783 Erigeron canadensis HOM05D005529 ORTHO05D006800 1.9e-95 352.8 223 76.2
Gohir.A05G247200 Gossypium hirsutum HOM05D005529 ORTHO05D006800 2.5e-95 352.4 223 77.1
Gohir.D05G248700 Gossypium hirsutum HOM05D005529 ORTHO05D006800 2.5e-95 352.4 223 77.1
Gorai.009G259800 Gossypium raimondii HOM05D005529 ORTHO05D006800 2.5e-95 352.4 223 77.1
Nn1g05167 Nelumbo nucifera HOM05D005529 ORTHO05D006800 3.3e-95 352.1 223 77.6
CDE04G0217 Ceratophyllum demersum HOM05D005529 ORTHO05D006800 1.2e-94 350.1 217 76.5
HanXRQChr11g0320531 Helianthus annuus HOM05D005529 ORTHO05D006800 1.2e-94 350.1 216 76.4
Dinv41017 Davidia involucrata HOM05D005529 ORTHO05D006800 2.0e-92 342.8 196 84.7
ECA247G3042 Erigeron canadensis HOM05D005529 ORTHO05D006800 2.0e-92 342.8 215 75.8
Lsat_1_v5_gn_1_5401 Lactuca sativa HOM05D005529 ORTHO05D006800 1.4e-90 336.7 215 75.3
Lsat_1_v5_gn_9_42620 Lactuca sativa HOM05D005529 ORTHO05D006800 1.6e-89 333.2 223 72.6
Os03g0381200 Oryza sativa ssp. japonica HOM05D005529 ORTHO05D006800 1.6e-89 333.2 223 74.0
Nn5g28882 Nelumbo nucifera HOM05D005529 ORTHO05D006800 6.6e-88 327.8 216 74.5
ClCG08G007150 Citrullus lanatus HOM05D005529 ORTHO05D006800 3.3e-87 325.5 223 71.7
ATR0564G028 Amborella trichopoda HOM05D005529 ORTHO05D006800 1.2e-81 307.0 197 75.1
Duzib093G1833 Durio zibethinus HOM05D005529 ORTHO05D006800 3.9e-80 302.0 223 68.6
MELO3C019956.2 Cucumis melo HOM05D005529 ORTHO05D006800 3.1e-77 292.4 223 67.3
Lj7C387G8 Lonicera japonica HOM05D005529 ORTHO05D006800 1.3e-75 287.0 215 66.0
Mapoly0006s0028 Marchantia polymorpha HOM05D005529 ORTHO05D006800 1.7e-75 286.6 218 65.1
Pp3c1_32040 Physcomitrium patens HOM05D005529 ORTHO05D006800 8.4e-75 284.3 218 65.1
TAR625G0192 Trochodendron aralioides HOM05D005529 ORTHO05D006800 7.9e-73 277.7 164 81.7
CARHR290990 Cardamine hirsuta HOM05D005529 ORTHO05D006800 6.6e-72 274.6 154 85.1
SMO141G0273 Selaginella moellendorffii HOM05D005529 ORTHO05D006800 1.9e-71 273.1 213 64.8
CDE07G0226 Ceratophyllum demersum HOM05D005529 ORTHO05D006800 2.1e-70 269.6 169 74.6
Zm00001eb018520 Zea mays HOM05D005529 ORTHO05D006800 2.4e-69 266.2 178 73.6
AagrBONN_evm.TU.Sc2ySwM_228.4378 Anthoceros agrestis HOM05D005529 ORTHO05D006800 1.3e-67 260.4 217 62.2
Ca_10643_v3 Cicer arietinum L. HOM05D005529 ORTHO05D006800 5.6e-63 245.0 142 83.8
Glyma.06G212500 Glycine max HOM05D005529 ORTHO05D006800 1.0e-56 224.2 132 81.8
MD10G1039400 Malus domestica HOM05D005529 ORTHO05D006800 4.1e-53 212.2 125 80.8
PRCOL_00004850 Prasinoderma coloniale HOM05D005529 ORTHO05D006800 2.5e-50 203.0 220 50.9
Glyma.09G074800 Glycine max HOM05D005529 ORTHO05D006800 1.6e-49 200.3 114 85.1
CSS0032133 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 2.1e-49 199.9 122 77.9
MD10G1040900 Malus domestica HOM05D005529 ORTHO05D006800 4.6e-49 198.7 170 62.4
Lsat_1_v5_gn_8_71180 Lactuca sativa HOM05D005529 ORTHO05D006800 1.9e-47 193.4 164 59.8
Haze_27340 Corylus avellana HOM05D005529 ORTHO05D006800 1.2e-44 184.1 211 46.0
Dinv13098 Davidia involucrata HOM05D005529 ORTHO05D006800 3.6e-41 172.6 98 82.7
Glyma.04G140500 Glycine max HOM05D005529 ORTHO05D006800 1.0e-40 171.0 104 81.7
AUR62022308 Chenopodium quinoa HOM05D005529 ORTHO05D006800 3.3e-39 166.0 102 78.4
Actinidia17753 Actinidia chinensis HOM05D005529 ORTHO05D006800 1.5e-36 157.1 123 68.3
Cfa022509 Carpinus fangiana HOM05D005529 ORTHO05D006800 1.5e-36 157.1 231 39.0
Lsat_1_v5_gn_3_73520 Lactuca sativa HOM05D005529 ORTHO05D006800 5.7e-31 138.7 99 65.7
Actinidia02780 Actinidia chinensis HOM05D005529 ORTHO05D006800 1.6e-28 130.6 78 79.5
Rhsim06G0089200 Rhododendron simsii HOM05D005529 ORTHO05D006800 7.7e-28 128.3 62 90.3
HPP92_020744 Vanilla planifolia HOM05D005529 ORTHO05D006800 1.5e-26 124.0 102 61.8
Glyma.20G171766 Glycine max HOM05D005529 ORTHO05D006800 6.1e-25 118.6 62 85.5
BcaC08g46606 Brassica carinata HOM05D005529 ORTHO05D006800 1.7e-22 110.5 62 83.9
HPP92_020840 Vanilla planifolia HOM05D005529 ORTHO05D006800 5.3e-21 105.5 62 77.4
MD10G1041000 Malus domestica HOM05D005529 ORTHO05D006800 3.8e-19 99.4 59 79.7
HPP92_020745 Vanilla planifolia HOM05D005529 ORTHO05D006800 5.0e-19 99.0 100 55.0
HPP92_020839 Vanilla planifolia HOM05D005529 ORTHO05D006800 5.2e-16 89.0 55 76.4


User provided reference genes

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