Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004292g0030 Nicotiana tabacum HOM05D006999 ORTHO05D008936 0.0e+00 1098.6 656 100.0
Nitab4.5_0000090g0200 Nicotiana tabacum HOM05D006999 ORTHO05D008936 2.1e-304 1048.5 656 95.9
PGSC0003DMG400001186 Solanum tuberosum HOM05D006999 ORTHO05D008936 1.3e-277 959.5 656 84.0
Sopen02g015710 Solanum pennellii HOM05D006999 ORTHO05D008936 1.4e-276 956.1 656 83.5
Solyc02g065510.1 Solanum lycopersicum HOM05D006999 ORTHO05D008936 4.3e-273 944.5 656 83.1
CAN.G93.18 Capsicum annuum HOM05D006999 ORTHO05D008936 1.7e-269 932.6 656 86.4
Peaxi162Scf00019g00154 Petunia axillaris HOM05D006999 ORTHO05D008936 2.0e-257 892.5 658 78.6
Cc05_g07730 Coffea canephora HOM05D006999 ORTHO05D008936 1.5e-204 716.8 656 57.6
MSTRG.15411 Avicennia marina HOM05D006999 ORTHO05D008936 1.8e-202 709.9 656 58.1
Dinv39939 Davidia involucrata HOM05D006999 ORTHO05D008936 5.8e-201 704.9 653 58.3
Oeu049321.1 Olea europaea HOM05D006999 ORTHO05D008936 1.7e-200 703.4 655 56.9
Oeu049309.1 Olea europaea HOM05D006999 ORTHO05D008936 1.9e-199 699.9 655 56.8
Dinv29387 Davidia involucrata HOM05D006999 ORTHO05D008936 1.8e-194 683.3 627 57.3
CSS0009159 Camellia sinensis var. sinensis HOM05D006999 ORTHO05D008936 2.4e-194 682.9 641 56.8
CSS0003698 Camellia sinensis var. sinensis HOM05D006999 ORTHO05D008936 1.2e-193 680.6 641 56.6
Migut.K00852 Erythranthe guttata HOM05D006999 ORTHO05D008936 2.0e-193 679.9 654 54.7
DCAR_026261 Daucus carota HOM05D006999 ORTHO05D008936 1.2e-187 660.6 644 56.2
SalBow1G0035 Salvia bowleyana HOM05D006999 ORTHO05D008936 5.8e-185 651.7 623 55.5
SGA_v2.0_scaffold62G21537 Striga asiatica HOM05D006999 ORTHO05D008936 1.8e-178 630.2 656 52.7
QL06p044626 Quercus lobata HOM05D006999 ORTHO05D008936 7.9e-174 614.8 655 53.1
Rhsim02G0229300 Rhododendron simsii HOM05D006999 ORTHO05D008936 5.1e-173 612.1 654 61.5
Prupe.7G147200 Prunus persica HOM05D006999 ORTHO05D008936 2.8e-171 606.3 653 57.7
RcHm_v2.0_Chr2g0102951 Rosa chinensis HOM05D006999 ORTHO05D008936 2.8e-171 606.3 639 54.1
GSVIVG01019040001 Vitis vinifera HOM05D006999 ORTHO05D008936 4.0e-170 602.4 651 51.2
CANSAT01G1763 Cannabis sativa HOM05D006999 ORTHO05D008936 2.2e-168 596.7 654 50.3
vmacro00136 Vaccinium macrocarpon HOM05D006999 ORTHO05D008936 8.4e-168 594.7 650 58.9
CiPaw.01G031400 Carya illinoinensis HOM05D006999 ORTHO05D008936 3.2e-167 592.8 664 51.2
ECA232G3871 Erigeron canadensis HOM05D006999 ORTHO05D008936 3.2e-167 592.8 628 57.2
Cpa.g.sc15.132 Carica papaya HOM05D006999 ORTHO05D008936 5.5e-167 592.0 659 50.8
Oeu049317.1 Olea europaea HOM05D006999 ORTHO05D008936 7.1e-167 591.7 551 57.9
TAR381G1039 Trochodendron aralioides HOM05D006999 ORTHO05D008936 9.3e-167 591.3 658 60.9
Aqoxy6G01000 Aquilegia oxysepala HOM05D006999 ORTHO05D008936 2.5e-164 583.2 627 52.2
Rhsim02G0225000 Rhododendron simsii HOM05D006999 ORTHO05D008936 6.2e-163 578.6 555 60.7
Sc03g0001020 Simmondsia chinensis HOM05D006999 ORTHO05D008936 1.8e-162 577.0 642 56.1
Nn5g29479 Nelumbo nucifera HOM05D006999 ORTHO05D008936 6.9e-162 575.1 646 55.0
Manes.13G134700 Manihot esculenta HOM05D006999 ORTHO05D008936 1.2e-161 574.3 652 50.0
MD15G1270900 Malus domestica HOM05D006999 ORTHO05D008936 2.0e-161 573.5 636 51.7
FAN23G0790 Fragaria x ananassa HOM05D006999 ORTHO05D008936 3.4e-161 572.8 644 57.5
TWI73G1021 Tripterygium wilfordii HOM05D006999 ORTHO05D008936 3.4e-161 572.8 640 59.5
Thecc.01G043300 Theobroma cacao HOM05D006999 ORTHO05D008936 2.2e-160 570.1 653 49.5
Gohir.D12G067100 Gossypium hirsutum HOM05D006999 ORTHO05D008936 9.3e-159 564.7 649 48.4
Gorai.008G070500 Gossypium raimondii HOM05D006999 ORTHO05D008936 2.1e-158 563.5 649 48.4
Phvul.002G025400 Phaseolus vulgaris HOM05D006999 ORTHO05D008936 1.3e-157 560.8 646 56.0
arahy.Tifrunner.gnm1.ann1.ZB5P2M Arachis hypogaea HOM05D006999 ORTHO05D008936 1.8e-157 560.5 642 50.9
Lj2g0003627 Lotus japonicus HOM05D006999 ORTHO05D008936 1.8e-157 560.5 646 48.5
Ca_24822_v3 Cicer arietinum L. HOM05D006999 ORTHO05D008936 2.3e-157 560.1 669 51.0
Duzib147G0594 Durio zibethinus HOM05D006999 ORTHO05D008936 3.0e-157 559.7 649 49.0
Gohir.A12G066700 Gossypium hirsutum HOM05D006999 ORTHO05D008936 1.3e-155 554.3 649 48.7
Lj4P134T41 Lonicera japonica HOM05D006999 ORTHO05D008936 6.3e-155 552.0 512 55.9
Cfa004253 Carpinus fangiana HOM05D006999 ORTHO05D008936 9.0e-154 548.1 645 49.6
VMungo1215G1670 Vigna mungo HOM05D006999 ORTHO05D008936 1.2e-153 547.7 646 55.3
Actinidia36538 Actinidia chinensis HOM05D006999 ORTHO05D008936 1.5e-153 547.4 662 53.5
HanXRQChr09g0265111 Helianthus annuus HOM05D006999 ORTHO05D008936 2.9e-152 543.1 644 52.6
FvH4_2g07140 Fragaria vesca HOM05D006999 ORTHO05D008936 5.0e-152 542.3 633 49.3
AUR62008030 Chenopodium quinoa HOM05D006999 ORTHO05D008936 1.4e-151 540.8 658 52.4
PSO541G6186 Papaver somniferum HOM05D006999 ORTHO05D008936 1.4e-151 540.8 658 46.2
Lalb_Chr09g0322731 Lupinus albus HOM05D006999 ORTHO05D008936 5.5e-151 538.9 652 55.1
Potri.005G128600 Populus trichocarpa HOM05D006999 ORTHO05D008936 9.4e-151 538.1 641 48.5
Sabra05G0104700 Salix brachista HOM05D006999 ORTHO05D008936 9.4e-151 538.1 664 46.5
Medtr5g019030 Medicago truncatula HOM05D006999 ORTHO05D008936 1.8e-149 533.9 657 57.5
Glyma.11G063000 Glycine max HOM05D006999 ORTHO05D008936 8.2e-147 525.0 657 57.8
TPR.G34465 Trifolium pratense HOM05D006999 ORTHO05D008936 3.4e-145 519.6 647 53.2
EL10Ac6g14872 Beta vulgaris HOM05D006999 ORTHO05D008936 7.7e-145 518.5 650 54.9
THA.LOC104826827 Tarenaya hassleriana HOM05D006999 ORTHO05D008936 2.9e-144 516.5 659 46.1
Ah.02g126330 Amaranthus hybridus HOM05D006999 ORTHO05D008936 5.0e-144 515.8 648 50.8
CARHR281110 Cardamine hirsuta HOM05D006999 ORTHO05D008936 7.2e-143 511.9 664 45.8
Eucgr.I02485 Eucalyptus grandis HOM05D006999 ORTHO05D008936 7.2e-143 511.9 647 51.5
Aa31LG1G15180 Aethionema arabicum HOM05D006999 ORTHO05D008936 1.2e-142 511.1 660 45.6
AT5G66631 Arabidopsis thaliana HOM05D006999 ORTHO05D008936 2.1e-142 510.4 656 46.2
BcaC06g34726 Brassica carinata HOM05D006999 ORTHO05D008936 2.0e-140 503.8 649 46.4
MBI16_g10978_MAGBIO Magnolia biondii HOM05D006999 ORTHO05D003554 7.4e-140 501.9 625 56.5
Thhalv10005592m.g Eutrema salsugineum HOM05D006999 ORTHO05D008936 6.3e-139 498.8 667 45.7
BcaB02g10006 Brassica carinata HOM05D006999 ORTHO05D008936 8.2e-139 498.4 655 46.3
AL8G44870 Arabidopsis lyrata HOM05D006999 ORTHO05D008936 3.1e-138 496.5 657 45.4
Sp2g30070 Schrenkiella parvula HOM05D006999 ORTHO05D008936 1.5e-137 494.2 653 45.5
BraA07t29457Z Brassica rapa HOM05D006999 ORTHO05D008936 2.0e-137 493.8 649 45.3
BolC7t43049H Brassica oleracea HOM05D006999 ORTHO05D008936 2.9e-136 490.0 648 45.4
Psat2g162640 Pisum sativum HOM05D006999 ORTHO05D008936 2.9e-136 490.0 647 55.2
A07p17310 Brassica napus HOM05D006999 ORTHO05D008936 1.5e-135 487.6 652 44.9
Atru.chr3.494 Acer truncatum HOM05D006999 ORTHO05D008936 3.8e-128 463.0 503 52.7
Ciclev10027580m.g Citrus clementina HOM05D006999 ORTHO05D008936 2.5e-127 460.3 635 55.6
FvH4_1g14280 Fragaria vesca HOM05D006999 ORTHO05D008936 4.2e-127 459.5 506 50.4
RcHm_v2.0_Chr2g0102871 Rosa chinensis HOM05D006999 ORTHO05D008936 5.7e-124 449.1 488 52.5
Carub.0008s2788 Capsella rubella HOM05D006999 ORTHO05D008936 5.9e-121 439.1 519 47.4
Hma1.2p1_2980F.1_g331210 Hydrangea macrophylla HOM05D006999 ORTHO05D008936 1.1e-119 434.9 556 45.5
Haze_15147 Corylus avellana HOM05D000909 ORTHO05D000928 1.5e-119 434.5 657 41.7
C07p25190 Brassica napus HOM05D006999 ORTHO05D008936 9.4e-119 431.8 546 45.1
HPP92_025826 Vanilla planifolia HOM05D006999 ORTHO05D008936 1.7e-115 421.0 633 40.8
CDE01G0819 Ceratophyllum demersum HOM05D006999 ORTHO05D008936 3.8e-112 409.8 630 40.5
ATR0782G111 Amborella trichopoda HOM05D006999 ORTHO05D008936 2.6e-100 370.5 676 37.3
Os01g0167750 Oryza sativa ssp. japonica HOM05D006999 ORTHO05D008936 3.5e-97 360.1 631 39.3
unitig_748.g8403 Utricularia gibba HOM05D006999 ORTHO05D008936 3.0e-96 357.1 386 49.7
SEGI_35610 Sequoiadendron giganteum HOM05D006999 ORTHO05D008936 4.0e-93 346.7 661 39.2
Zm00001eb123240 Zea mays HOM05D006999 ORTHO05D008936 9.8e-92 342.0 619 42.8
Dinv18613 Davidia involucrata HOM05D006999 ORTHO05D008936 5.6e-87 326.2 633 36.2
Dinv26229 Davidia involucrata HOM05D006999 ORTHO05D008936 5.6e-87 326.2 633 36.2
Haze_25752 Corylus avellana HOM05D006999 ORTHO05D008936 6.6e-80 302.8 677 32.3
Cfa021547 Carpinus fangiana HOM05D006999 ORTHO05D008936 9.6e-71 272.3 657 33.3
Cfa003411 Carpinus fangiana HOM05D006999 ORTHO05D008936 7.1e-58 229.6 644 34.3
unitig_748.g8404 Utricularia gibba HOM05D006999 ORTHO05D008936 4.5e-52 210.3 236 50.4
Glyma.01G179201 Glycine max HOM05D006999 ORTHO05D008936 4.8e-46 190.3 227 67.4
Glyma.01G179251 Glycine max HOM05D006999 ORTHO05D008936 1.6e-38 165.2 228 43.0
COL.COLO4_22153 Corchorus olitorius HOM05D000225 ORTHO05D003554 5.5e-34 150.2 194 44.8
FAN28G3023 Fragaria x ananassa HOM05D006999 ORTHO05D008936 1.8e-32 145.2 178 42.1
Actinidia12102 Actinidia chinensis HOM05D006999 ORTHO05D008936 5.5e-26 123.6 154 46.8
HanXRQChr09g0268161 Helianthus annuus HOM05D006999 ORTHO05D008936 4.8e-22 110.5 151 42.4
Aa31LG1G15170 Aethionema arabicum HOM05D000909 ORTHO05D008936 9.4e-18 96.3 149 43.0
Pp3c4_14140 Physcomitrium patens HOM05D006999 ORTHO05D008936 5.3e-13 80.5 170 27.6
EL10Ac6g14214 Beta vulgaris HOM05D006999 ORTHO05D008936 2.1e-09 68.6 155 29.7
AagrBONN_evm.TU.Sc2ySwM_344.143 Anthoceros agrestis HOM05D004079 ORTHO05D008936 8.0e-09 66.6 120 31.7
Pp3c1_6490 Physcomitrium patens HOM05D006749 ORTHO05D008352 1.4e-08 65.9 139 30.9
Mapoly0001s0055 Marchantia polymorpha HOM05D004079 ORTHO05D005437 2.3e-08 65.1 170 26.5
Hma1.2p1_0180F.1_g079710 Hydrangea macrophylla HOM05D002986 ORTHO05D003966 4.0e-08 64.3 176 26.1
MD02G1156600 Malus domestica HOM05D006999 ORTHO05D008936 5.2e-08 63.9 157 33.8
MELO3C004182.2 Cucumis melo HOM05D000424 ORTHO05D002854 1.5e-07 62.4 163 28.2
DCAR_021786 Daucus carota HOM05D000424 ORTHO05D002854 1.5e-07 62.4 194 24.7
Prupe.2G122500 Prunus persica HOM05D000104 ORTHO05D009920 1.5e-07 62.4 205 26.3
Mapoly0026s0011 Marchantia polymorpha HOM05D006999 ORTHO05D008936 2.6e-07 61.6 96 33.3
ATR0003G004 Amborella trichopoda HOM05D002986 ORTHO05D003966 3.4e-07 61.2 153 29.4
CDE05G0489 Ceratophyllum demersum HOM05D007202 ORTHO05D009125 4.4e-07 60.8 167 25.1
MBI04_g06993_MAGBIO Magnolia biondii HOM05D007352 ORTHO05D009389 1.3e-06 59.3 162 27.8
BraA10t45038Z Brassica rapa HOM05D006596 ORTHO05D008497 1.7e-06 58.9 175 26.3
Gohir.D02G188900 Gossypium hirsutum HOM05D007202 ORTHO05D009125 1.7e-06 58.9 174 26.4
CANSAT80G0905 Cannabis sativa HOM05D006008 ORTHO05D007334 2.2e-06 58.5 179 25.1
Aa31LG11G11280 Aethionema arabicum HOM05D007661 ORTHO05D009671 2.8e-06 58.2 156 26.3
CARHR194640 Cardamine hirsuta HOM05D007661 ORTHO05D009671 3.7e-06 57.8 162 24.7
Sp6g25930 Schrenkiella parvula HOM05D007661 ORTHO05D009671 3.7e-06 57.8 158 24.7
C03p10300 Brassica napus HOM05D007661 ORTHO05D009671 4.8e-06 57.4 157 25.5
BraA03t10206Z Brassica rapa HOM05D007661 ORTHO05D009671 4.8e-06 57.4 157 25.5
Carub.0006s1665 Capsella rubella HOM05D007661 ORTHO05D009671 4.8e-06 57.4 162 24.7
CsaV3_2G007110 Cucumis sativus L. HOM05D000424 ORTHO05D002854 4.8e-06 57.4 163 26.4
Medtr7g079860 Medicago truncatula HOM05D000001 ORTHO05D010091 4.8e-06 57.4 140 25.7
SHI10915 Sapria himalayana HOM05D006749 ORTHO05D008352 4.8e-06 57.4 185 27.6
MBI19_g17402_MAGBIO Magnolia biondii HOM05D000424 ORTHO05D002854 6.3e-06 57.0 162 24.1
Phvul.006G173400 Phaseolus vulgaris HOM05D000424 ORTHO05D002854 6.3e-06 57.0 163 25.8
ATR0684G123 Amborella trichopoda HOM05D006232 ORTHO05D007746 8.3e-06 56.6 154 26.6
A03p08810 Brassica napus HOM05D007661 ORTHO05D009671 8.3e-06 56.6 157 24.8
ClCG02G014900 Citrullus lanatus HOM05D000424 ORTHO05D002854 8.3e-06 56.6 185 23.2
Cc09_g04270 Coffea canephora HOM05D006232 ORTHO05D007746 8.3e-06 56.6 161 29.8
FAN06G4216 Fragaria x ananassa HOM05D000104 ORTHO05D009920 8.3e-06 56.6 185 25.9
FAN06G4654 Fragaria x ananassa HOM05D000104 ORTHO05D009920 8.3e-06 56.6 185 25.9
Gorai.005G211700 Gossypium raimondii HOM05D007202 ORTHO05D009125 8.3e-06 56.6 174 25.9
Mapoly0116s0031 Marchantia polymorpha HOM05D040657 ORTHO05D023551 8.3e-06 56.6 165 26.1


User provided reference genes

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