Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004286g0010 Nicotiana tabacum HOM05D007763 ORTHO05D009537 1.7e-120 437.6 243 100.0
Nitab4.5_0003021g0070 Nicotiana tabacum HOM05D007763 ORTHO05D009537 6.4e-40 169.9 118 96.6
Solyc06g069700.4 Solanum lycopersicum HOM05D007763 ORTHO05D009537 7.6e-33 146.4 120 85.0
Sopen06g027000 Solanum pennellii HOM05D007763 ORTHO05D009537 7.6e-33 146.4 120 85.0
CAN.G587.9 Capsicum annuum HOM05D007763 ORTHO05D009537 5.1e-29 133.7 120 83.3
Peaxi162Scf00013g00410 Petunia axillaris HOM05D007763 ORTHO05D009537 1.6e-27 128.6 120 75.8
CSS0022156 Camellia sinensis var. sinensis HOM05D007763 ORTHO05D009537 1.8e-13 82.0 50 62.0
Oeu052450.2 Olea europaea HOM05D007763 ORTHO05D009537 5.7e-12 77.0 50 58.0
Actinidia04871 Actinidia chinensis HOM05D007763 ORTHO05D009537 9.7e-12 76.3 51 54.9
Lj9C466T13 Lonicera japonica HOM05D007763 ORTHO05D009537 1.3e-11 75.9 51 58.8
Rhsim08G0152400 Rhododendron simsii HOM05D000001 ORTHO05D010304 2.8e-11 74.7 50 58.0
QL10p017571 Quercus lobata HOM05D007763 ORTHO05D009537 3.7e-11 74.3 51 58.8
SGA_v2.0_scaffold25G10931 Striga asiatica HOM05D007763 ORTHO05D009537 6.3e-11 73.6 50 54.0
TAR622G0770 Trochodendron aralioides HOM05D007763 ORTHO05D009537 6.3e-11 73.6 51 56.9
Nn2g12476 Nelumbo nucifera HOM05D007763 ORTHO05D009537 1.1e-10 72.8 50 56.0
Duzib205G0970 Durio zibethinus HOM05D007763 ORTHO05D009537 1.4e-10 72.4 50 54.0
Migut.I00207 Erythranthe guttata HOM05D007763 ORTHO05D009537 3.1e-10 71.2 50 54.0
Cc04_g15160 Coffea canephora HOM05D007763 ORTHO05D009537 5.3e-10 70.5 50 54.0
Hma1.2p1_0060F.1_g033520 Hydrangea macrophylla HOM05D007763 ORTHO05D009537 5.3e-10 70.5 51 52.9
MSTRG.11374 Avicennia marina HOM05D007763 ORTHO05D009537 2.6e-09 68.2 46 56.5
EL10Ac5g11053 Beta vulgaris HOM05D014602 ORTHO05D009537 3.4e-09 67.8 51 54.9
Dinv38739 Davidia involucrata HOM05D007763 ORTHO05D001128 3.4e-09 67.8 51 54.9
AUR62021645 Chenopodium quinoa HOM05D007763 ORTHO05D009537 4.5e-09 67.4 51 54.9
Gohir.A03G067600 Gossypium hirsutum HOM05D007763 ORTHO05D009537 4.5e-09 67.4 66 48.5
Gohir.D03G094100 Gossypium hirsutum HOM05D007763 ORTHO05D009537 4.5e-09 67.4 66 48.5
Gorai.003G098200 Gossypium raimondii HOM05D007763 ORTHO05D009537 4.5e-09 67.4 66 48.5
Thecc.03G093400 Theobroma cacao HOM05D007763 ORTHO05D009537 4.5e-09 67.4 50 50.0
TWI60G1313 Tripterygium wilfordii HOM05D007763 ORTHO05D009537 4.5e-09 67.4 51 54.9
Atru.chr12.1670 Acer truncatum HOM05D007763 ORTHO05D009537 5.9e-09 67.0 51 52.9
COL.COLO4_36930 Corchorus olitorius HOM05D007763 ORTHO05D009537 5.9e-09 67.0 50 50.0
DCAR_002300 Daucus carota HOM05D007763 ORTHO05D009537 5.9e-09 67.0 50 56.0
Sc12g0006490 Simmondsia chinensis HOM05D007763 ORTHO05D009537 7.7e-09 66.6 51 52.9
Aqoxy3G00480 Aquilegia oxysepala HOM05D007763 ORTHO05D009537 1.0e-08 66.2 51 49.0
Ciclev10024595m.g Citrus clementina HOM05D007763 ORTHO05D009537 2.2e-08 65.1 51 49.0
Hund02629 Selenicereus undatus HOM05D007763 ORTHO05D019789 2.2e-08 65.1 51 52.9
TPR.G27557 Trifolium pratense HOM05D007763 ORTHO05D009537 2.2e-08 65.1 116 34.5
GSVIVG01007974001 Vitis vinifera HOM05D007763 ORTHO05D010304 2.2e-08 65.1 50 50.0
Lsat_1_v5_gn_5_21540 Lactuca sativa HOM05D007763 ORTHO05D009537 2.9e-08 64.7 46 50.0
RcHm_v2.0_Chr7g0181881 Rosa chinensis HOM05D007763 ORTHO05D009537 2.9e-08 64.7 65 47.7
Manes.14G081200 Manihot esculenta HOM05D007763 ORTHO05D009537 5.0e-08 63.9 50 52.0
PGR031G2821 Punica granatum HOM05D007763 ORTHO05D009537 5.0e-08 63.9 52 48.1
Atru.chr12.1664 Acer truncatum HOM05D007763 ORTHO05D009537 6.5e-08 63.5 66 48.5
Haze_07298 Corylus avellana HOM05D007763 ORTHO05D010304 8.5e-08 63.2 48 54.2
Aqoxy2G01348 Aquilegia oxysepala HOM05D007763 ORTHO05D009537 1.1e-07 62.8 51 49.0
PSO017G0499 Papaver somniferum HOM05D007763 ORTHO05D009537 1.4e-07 62.4 51 47.1
arahy.Tifrunner.gnm1.ann1.NWYI6Z Arachis hypogaea HOM05D000001 ORTHO05D010304 1.9e-07 62.0 94 37.2
Prupe.5G197300 Prunus persica HOM05D007763 ORTHO05D009537 1.9e-07 62.0 51 47.1
Phvul.009G185566 Phaseolus vulgaris HOM05D007763 ORTHO05D009537 3.2e-07 61.2 56 46.4
vmacro17568 Vaccinium macrocarpon HOM05D007763 ORTHO05D009537 3.2e-07 61.2 110 42.7
FvH4_5g14610 Fragaria vesca HOM05D007763 ORTHO05D009537 4.2e-07 60.8 51 51.0
FAN13G0255 Fragaria x ananassa HOM05D007763 ORTHO05D009537 4.2e-07 60.8 51 51.0
FAN18G1924 Fragaria x ananassa HOM05D007763 ORTHO05D009537 4.2e-07 60.8 51 51.0
THA.LOC104801471 Tarenaya hassleriana HOM05D007763 ORTHO05D009537 4.2e-07 60.8 64 45.3
AUR62008445 Chenopodium quinoa HOM05D007763 ORTHO05D009537 5.5e-07 60.5 48 52.1
LjContig00102g0005353 Lotus japonicus HOM05D000001 ORTHO05D010304 5.5e-07 60.5 50 48.0
ECA246G2275 Erigeron canadensis HOM05D007763 ORTHO05D009537 1.2e-06 59.3 64 42.2
arahy.Tifrunner.gnm1.ann1.PFL66H Arachis hypogaea HOM05D007763 ORTHO05D009537 2.1e-06 58.5 57 43.9
Sed0000161 Sechium edule HOM05D007763 ORTHO05D009537 2.7e-06 58.2 51 47.1
BcaNung06902 Brassica carinata HOM05D007763 ORTHO05D009537 3.6e-06 57.8 68 39.7
CARHR275160 Cardamine hirsuta HOM05D007763 ORTHO05D009537 3.6e-06 57.8 58 44.8
Ah.02g113700 Amaranthus hybridus HOM05D007763 ORTHO05D009537 4.6e-06 57.4 47 46.8
Ca_14664_v3 Cicer arietinum L. HOM05D007763 ORTHO05D009537 6.1e-06 57.0 69 40.6
ClCG09G020450 Citrullus lanatus HOM05D007763 ORTHO05D009537 7.9e-06 56.6 51 45.1
HanXRQChr08g0236691 Helianthus annuus HOM05D007763 ORTHO05D009537 7.9e-06 56.6 64 43.8


User provided reference genes

Program Settings