Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004264g0020 Nicotiana tabacum HOM05D005239 ORTHO05D006698 3.8e-241 837.8 438 100.0
Sopen01g032450 Solanum pennellii HOM05D005239 ORTHO05D006698 1.0e-209 733.4 442 87.1
Solyc01g080860.3 Solanum lycopersicum HOM05D005239 ORTHO05D006698 4.3e-208 728.0 442 86.7
Peaxi162Scf01144g00013 Petunia axillaris HOM05D005239 ORTHO05D006698 1.2e-207 726.5 441 88.0
PGSC0003DMG400001672 Solanum tuberosum HOM05D005239 ORTHO05D006698 1.1e-203 713.4 469 81.2
Nitab4.5_0001476g0120 Nicotiana tabacum HOM05D005239 ORTHO05D006698 2.0e-202 709.1 438 85.8
CAN.G1480.7 Capsicum annuum HOM05D005239 ORTHO05D006698 6.6e-185 651.0 390 87.2
Hma1.2p1_0601F.1_g187220 Hydrangea macrophylla HOM05D005239 ORTHO05D006698 5.1e-169 598.2 457 69.8
Dinv43567 Davidia involucrata HOM05D005239 ORTHO05D006698 2.0e-165 586.3 416 74.0
Actinidia21601 Actinidia chinensis HOM05D005239 ORTHO05D006698 6.0e-162 574.7 450 69.8
CSS0007844 Camellia sinensis var. sinensis HOM05D005239 ORTHO05D006698 6.0e-162 574.7 458 68.3
Dinv44000 Davidia involucrata HOM05D005239 ORTHO05D001060 1.5e-160 570.1 367 78.5
vmacro21097 Vaccinium macrocarpon HOM05D005239 ORTHO05D006698 4.3e-160 568.5 444 69.8
CiPaw.13G020400 Carya illinoinensis HOM05D005239 ORTHO05D006698 9.6e-160 567.4 453 68.4
Oeu002884.1 Olea europaea HOM05D005239 ORTHO05D006698 1.3e-159 567.0 522 60.7
MD08G1235300 Malus domestica HOM05D005239 ORTHO05D006698 1.4e-158 563.5 448 67.4
Rhsim01G0145300 Rhododendron simsii HOM05D005239 ORTHO05D006698 1.3e-156 557.0 476 64.3
CsaV3_3G010220 Cucumis sativus L. HOM05D005239 ORTHO05D006698 4.9e-156 555.1 448 66.3
MELO3C006242.2 Cucumis melo HOM05D005239 ORTHO05D006698 8.4e-156 554.3 448 65.8
RcHm_v2.0_Chr6g0273481 Rosa chinensis HOM05D005239 ORTHO05D006698 4.2e-155 552.0 449 66.8
Nn6g33642 Nelumbo nucifera HOM05D005239 ORTHO05D006698 3.5e-154 548.9 461 66.6
Prupe.1G571600 Prunus persica HOM05D005239 ORTHO05D006698 6.0e-154 548.1 452 65.5
Cfa011001 Carpinus fangiana HOM05D002067 ORTHO05D001060 7.9e-154 547.7 423 68.8
TAR636G2805 Trochodendron aralioides HOM05D005239 ORTHO05D006698 7.9e-154 547.7 457 65.2
Cc02_g25930 Coffea canephora HOM05D005239 ORTHO05D006698 1.0e-153 547.4 443 67.0
DCAR_029633 Daucus carota HOM05D005239 ORTHO05D006698 1.0e-153 547.4 440 66.1
SGA_v2.0_scaffold69G23296 Striga asiatica HOM05D005239 ORTHO05D006698 2.3e-153 546.2 444 67.8
Gorai.006G218900 Gossypium raimondii HOM05D005239 ORTHO05D006698 3.0e-153 545.8 458 65.3
Gohir.A09G201600 Gossypium hirsutum HOM05D005239 ORTHO05D006698 6.7e-153 544.7 458 65.5
ECA234G1231 Erigeron canadensis HOM05D005239 ORTHO05D006698 8.7e-153 544.3 446 66.8
FvH4_2g12720 Fragaria vesca HOM05D005239 ORTHO05D006698 1.1e-152 543.9 443 66.1
Duzib151G1142 Durio zibethinus HOM05D005239 ORTHO05D006698 3.3e-152 542.3 458 64.8
SGA_v2.0_scaffold52G19274 Striga asiatica HOM05D005239 ORTHO05D006698 4.3e-152 542.0 445 67.2
TWI59G0212 Tripterygium wilfordii HOM05D005239 ORTHO05D006698 7.4e-152 541.2 457 65.2
Thecc.04G216000 Theobroma cacao HOM05D005239 ORTHO05D006698 2.1e-151 539.7 446 65.0
TAR629G3002 Trochodendron aralioides HOM05D005239 ORTHO05D006698 2.8e-151 539.3 433 66.3
Eucgr.H02846 Eucalyptus grandis HOM05D005239 ORTHO05D006698 4.8e-151 538.5 470 61.9
FAN27G2303 Fragaria x ananassa HOM05D005239 ORTHO05D006698 6.2e-151 538.1 456 64.5
Gohir.D09G195500 Gossypium hirsutum HOM05D005239 ORTHO05D006698 6.2e-151 538.1 458 64.8
PGR119G0794 Punica granatum HOM05D005239 ORTHO05D006698 6.2e-151 538.1 462 63.0
Sed0027364 Sechium edule HOM05D005239 ORTHO05D006698 1.4e-150 537.0 443 63.7
FAN15G3107 Fragaria x ananassa HOM05D005239 ORTHO05D006698 6.9e-150 534.6 456 63.8
Sed0010493 Sechium edule HOM05D005239 ORTHO05D006698 4.5e-149 531.9 446 64.6
HanXRQChr17g0562471 Helianthus annuus HOM05D005239 ORTHO05D006698 5.8e-149 531.6 457 66.3
COL.COLO4_20862 Corchorus olitorius HOM05D005239 ORTHO05D006698 7.6e-149 531.2 452 63.7
CANSAT54G1536 Cannabis sativa HOM05D005239 ORTHO05D006698 2.2e-148 529.6 438 64.8
Ciclev10020370m.g Citrus clementina HOM05D005239 ORTHO05D006698 2.9e-148 529.3 391 71.6
Sabra02G0168400 Salix brachista HOM05D005239 ORTHO05D006698 2.9e-148 529.3 452 65.3
Atru.chr9.1540 Acer truncatum HOM05D005239 ORTHO05D006698 3.8e-148 528.9 396 69.4
ClCG05G002730 Citrullus lanatus HOM05D005239 ORTHO05D006698 8.4e-148 527.7 449 64.4
Ah.06g191320 Amaranthus hybridus HOM05D005239 ORTHO05D006698 1.4e-147 526.9 445 65.2
GSVIVG01018386001 Vitis vinifera HOM05D005239 ORTHO05D006698 1.4e-147 526.9 440 64.8
Manes.05G061000 Manihot esculenta HOM05D005239 ORTHO05D006698 1.6e-146 523.5 448 64.5
Glyma.20G243400 Glycine max HOM05D005239 ORTHO05D006698 6.1e-146 521.5 394 69.8
QL04p024849 Quercus lobata HOM05D005239 ORTHO05D006698 7.9e-146 521.2 390 69.7
Lj9A547G68 Lonicera japonica HOM05D005239 ORTHO05D006698 1.3e-145 520.4 339 77.0
Potri.002G216100 Populus trichocarpa HOM05D005239 ORTHO05D006698 1.8e-145 520.0 452 64.4
TWI14G1099 Tripterygium wilfordii HOM05D005239 ORTHO05D006698 1.8e-145 520.0 452 63.5
AUR62035533 Chenopodium quinoa HOM05D005239 ORTHO05D006698 3.0e-145 519.2 446 63.5
Sc20g0003020 Simmondsia chinensis HOM05D005239 ORTHO05D006698 1.9e-144 516.5 383 69.7
AUR62041654 Chenopodium quinoa HOM05D005239 ORTHO05D006698 4.3e-144 515.4 445 62.7
Haze_02934 Corylus avellana HOM05D005239 ORTHO05D006698 8.2e-143 511.1 469 61.0
CDE04G1215 Ceratophyllum demersum HOM05D005239 ORTHO05D006698 1.8e-142 510.0 451 61.9
unitig_26.g9718 Utricularia gibba HOM05D005239 ORTHO05D006698 4.1e-142 508.8 470 60.0
Lj5g0010357 Lotus japonicus HOM05D005239 ORTHO05D006698 5.3e-142 508.4 379 71.0
THA.LOC104802511 Tarenaya hassleriana HOM05D005239 ORTHO05D006698 6.9e-142 508.1 445 62.2
arahy.Tifrunner.gnm1.ann1.X9CQTL Arachis hypogaea HOM05D005239 ORTHO05D006698 2.6e-141 506.1 376 70.2
arahy.Tifrunner.gnm1.ann1.XN1C7B Arachis hypogaea HOM05D005239 ORTHO05D006698 1.7e-140 503.4 379 69.7
Phvul.007G006700 Phaseolus vulgaris HOM05D005239 ORTHO05D006698 2.2e-140 503.1 379 69.4
EL10Ac4g08842 Beta vulgaris HOM05D005239 ORTHO05D006698 1.9e-139 500.0 440 62.0
Medtr1g116110 Medicago truncatula HOM05D005239 ORTHO05D006698 1.9e-139 500.0 369 68.6
TPR.G10426 Trifolium pratense HOM05D005239 ORTHO05D006698 3.2e-139 499.2 364 69.8
Ca_11344_v3 Cicer arietinum L. HOM05D005239 ORTHO05D006698 4.2e-139 498.8 357 70.6
Aqoxy3G02472 Aquilegia oxysepala HOM05D005239 ORTHO05D006698 5.5e-139 498.4 462 62.1
THA.LOC104817164 Tarenaya hassleriana HOM05D005239 ORTHO05D006698 1.6e-138 496.9 443 60.9
VMungo0720G0476 Vigna mungo HOM05D005239 ORTHO05D006698 1.0e-137 494.2 380 67.4
PSO170G2576 Papaver somniferum HOM05D005239 ORTHO05D006698 1.4e-137 493.8 406 64.3
ATR1153G024 Amborella trichopoda HOM05D005239 ORTHO05D006698 3.9e-137 492.3 391 64.5
PSO302G0170 Papaver somniferum HOM05D005239 ORTHO05D006698 3.9e-137 492.3 468 59.2
Thhalv10001456m.g Eutrema salsugineum HOM05D005239 ORTHO05D006698 8.8e-137 491.1 450 60.7
Lsat_1_v5_gn_4_39040 Lactuca sativa HOM05D005239 ORTHO05D006698 8.8e-137 491.1 446 62.8
Aa31LG1G26110 Aethionema arabicum HOM05D005239 ORTHO05D006698 2.0e-136 490.0 441 61.0
Lalb_Chr02g0143811 Lupinus albus HOM05D005239 ORTHO05D006698 2.0e-136 490.0 368 68.8
HPP92_001886 Vanilla planifolia HOM05D005239 ORTHO05D006698 7.4e-136 488.0 397 66.5
AL4G43540 Arabidopsis lyrata HOM05D005239 ORTHO05D006698 1.4e-134 483.8 446 60.1
Sp4g26610 Schrenkiella parvula HOM05D005239 ORTHO05D006698 1.4e-134 483.8 446 60.3
Psat6g232360 Pisum sativum HOM05D005239 ORTHO05D006698 5.3e-134 481.9 361 69.0
Carub.0004s2708 Capsella rubella HOM05D005239 ORTHO05D006698 6.9e-134 481.5 443 59.8
AT2G44520 Arabidopsis thaliana HOM05D005239 ORTHO05D006698 1.5e-133 480.3 448 58.3
BolC4t28610H Brassica oleracea HOM05D005239 ORTHO05D006698 1.5e-133 480.3 441 59.6
BcaB06g29384 Brassica carinata HOM05D005239 ORTHO05D006698 3.4e-133 479.2 445 60.0
BcaC02g07098 Brassica carinata HOM05D005239 ORTHO05D006698 4.5e-133 478.8 441 59.0
BraA04t18797Z Brassica rapa HOM05D005239 ORTHO05D006698 7.7e-133 478.0 442 59.0
Os01g0527700 Oryza sativa ssp. japonica HOM05D005239 ORTHO05D006698 2.5e-131 473.0 355 67.0
C04p05410 Brassica napus HOM05D005239 ORTHO05D006698 1.2e-130 470.7 351 67.8
BolC4t22181H Brassica oleracea HOM05D005239 ORTHO05D006698 1.2e-130 470.7 351 67.8
Zm00001eb402310 Zea mays HOM05D005239 ORTHO05D006698 1.4e-129 467.2 436 59.4
MD15G1426600 Malus domestica HOM05D005239 ORTHO05D006698 9.1e-126 454.5 305 74.8
BcaC02g12301 Brassica carinata HOM05D005239 ORTHO05D006698 3.2e-123 446.0 344 65.7
C04p71050 Brassica napus HOM05D000073 ORTHO05D006698 9.4e-123 444.5 338 66.0
A04p33360 Brassica napus HOM05D000073 ORTHO05D006698 2.7e-122 443.0 335 66.6
BcaNung07053 Brassica carinata HOM05D005239 ORTHO05D006698 4.7e-122 442.2 445 57.3
Duzib212G0896 Durio zibethinus HOM05D005239 ORTHO05D006698 8.0e-122 441.4 455 56.5
Zm00001eb005400 Zea mays HOM05D005239 ORTHO05D006698 8.8e-121 438.0 333 67.3
Migut.B01467 Erythranthe guttata HOM05D005239 ORTHO05D006698 2.0e-117 426.8 321 70.1
Actinidia33289 Actinidia chinensis HOM05D005239 ORTHO05D006698 1.4e-113 414.1 330 67.9
SEGI_24425 Sequoiadendron giganteum HOM05D005239 ORTHO05D006698 4.5e-109 399.1 294 67.0
Cpa.g.sc20.28 Carica papaya HOM05D005239 ORTHO05D006698 6.5e-108 395.2 254 77.6
AagrBONN_evm.TU.Sc2ySwM_369.187 Anthoceros agrestis HOM05D005239 ORTHO05D006698 4.7e-106 389.0 355 55.5
CAN.G74.42 Capsicum annuum HOM05D005239 ORTHO05D006698 5.2e-105 385.6 315 67.0
Hma1.2p1_0601F.1_g187230 Hydrangea macrophylla HOM05D005239 ORTHO05D006698 3.1e-102 376.3 294 68.4
Mapoly0029s0153 Marchantia polymorpha HOM05D005239 ORTHO05D006698 1.0e-100 371.3 365 53.7
SMO364G0841 Selaginella moellendorffii HOM05D005239 ORTHO05D006698 4.2e-99 365.9 346 54.9
CDE12G0888 Ceratophyllum demersum HOM05D005239 ORTHO05D006698 2.9e-92 343.2 246 71.1
CARHR139710 Cardamine hirsuta HOM05D005239 ORTHO05D006698 1.4e-89 334.3 246 68.3
CBR_g3821 Chara braunii HOM05D005239 ORTHO05D006698 1.4e-89 334.3 320 54.1
Pp3c14_19200 Physcomitrium patens HOM05D005239 ORTHO05D006698 9.2e-86 321.6 261 60.5
PSO357G0304 Papaver somniferum HOM05D005239 ORTHO05D006698 5.0e-84 315.8 201 77.6
Oeu037395.1 Olea europaea HOM05D005239 ORTHO05D006698 2.2e-79 300.4 357 52.9
BraA05t19443Z Brassica rapa HOM05D005239 ORTHO05D006698 6.4e-71 272.3 290 52.4
Cre12.g516350 Chlamydomonas reinhardtii HOM05D005239 ORTHO05D006698 8.3e-71 271.9 278 52.2
MCO03G363 Micromonas commoda HOM05D005239 ORTHO05D006698 6.0e-69 265.8 283 50.5
PRCOL_00000009 Prasinoderma coloniale HOM05D005239 ORTHO05D006698 1.0e-68 265.0 343 43.4
A05p04670 Brassica napus HOM05D005239 ORTHO05D006698 8.6e-68 261.9 280 54.6
MD15G1426900 Malus domestica HOM05D005239 ORTHO05D006698 9.6e-67 258.5 188 68.6
Aqoxy5G02001 Aquilegia oxysepala HOM05D005239 ORTHO05D006698 1.7e-63 247.7 170 73.5
BcaB02g08828 Brassica carinata HOM05D005239 ORTHO05D006698 3.8e-55 219.9 242 53.3
SHI13675 Sapria himalayana HOM05D005239 ORTHO05D006698 1.6e-45 188.0 204 52.9
FAN24G3432 Fragaria x ananassa HOM05D005239 ORTHO05D006698 6.7e-44 182.6 200 56.5
Cfa027222 Carpinus fangiana HOM05D005239 ORTHO05D006698 5.1e-36 156.4 296 36.8
PGR004G1759 Punica granatum HOM05D005239 ORTHO05D006698 1.9e-30 137.9 121 60.3
PSO081G0040 Papaver somniferum HOM05D005239 ORTHO05D006698 3.0e-28 130.6 84 77.4
TPR.G37315 Trifolium pratense HOM05D005239 ORTHO05D006698 3.9e-28 130.2 83 74.7
Glyma.10G293300 Glycine max HOM05D005239 ORTHO05D006698 1.1e-25 122.1 76 72.4
RcHm_v2.0_Chr6g0271171 Rosa chinensis HOM05D005239 ORTHO05D006698 4.6e-21 106.7 72 72.2
CDE12G0056 Ceratophyllum demersum HOM05D005239 ORTHO05D006698 7.9e-21 105.9 73 71.2
RcHm_v2.0_Chr7g0200821 Rosa chinensis HOM05D005239 ORTHO05D006698 7.4e-19 99.4 72 68.1
Cc02_g25970 Coffea canephora HOM05D005239 ORTHO05D006698 8.5e-15 85.9 99 49.5
SEGI_27712 Sequoiadendron giganteum HOM05D005239 ORTHO05D006698 1.5e-11 75.1 57 66.7
SHI13676 Sapria himalayana HOM05D005239 ORTHO05D006698 1.1e-09 68.9 85 51.8
MSTRG.17096 Avicennia marina HOM05D005239 ORTHO05D006698 2.5e-06 57.8 34 82.4


User provided reference genes

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