Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004256g0020 Nicotiana tabacum HOM05D007130 ORTHO05D002078 2.3e-205 718.8 384 100.0
Nitab4.5_0001342g0090 Nicotiana tabacum HOM05D007130 ORTHO05D002078 3.0e-173 612.1 345 95.9
Peaxi162Scf00092g00720 Petunia axillaris HOM05D007130 ORTHO05D002078 1.2e-134 483.8 348 77.9
Sopen09g031010 Solanum pennellii HOM05D007130 ORTHO05D002078 1.6e-129 466.8 369 71.5
Solyc09g082130.4 Solanum lycopersicum HOM05D007130 ORTHO05D002078 1.9e-127 459.9 369 70.7
CAN.G1094.6 Capsicum annuum HOM05D007130 ORTHO05D002078 1.0e-125 454.1 395 66.1
Dinv44541 Davidia involucrata HOM05D007130 ORTHO05D002078 9.3e-58 228.4 258 49.6
Cc03_g03890 Coffea canephora HOM05D007130 ORTHO05D002078 6.0e-57 225.7 369 40.9
MSTRG.9978 Avicennia marina HOM05D007130 ORTHO05D002078 1.4e-53 214.5 344 40.1
SGA_v2.0_scaffold39G15213 Striga asiatica HOM05D007130 ORTHO05D002078 2.7e-49 200.3 363 38.8
Cfa015660 Carpinus fangiana HOM05D007130 ORTHO05D002078 4.5e-44 183.0 243 44.0
Manes.03G177600 Manihot esculenta HOM05D007130 ORTHO05D002078 4.5e-44 183.0 244 44.7
Duzib052G0494 Durio zibethinus HOM05D007130 ORTHO05D002078 1.7e-43 181.0 241 42.3
Duzib151G0843 Durio zibethinus HOM05D007130 ORTHO05D002078 2.2e-43 180.6 243 42.8
Haze_00888 Corylus avellana HOM05D007130 ORTHO05D002078 2.9e-43 180.3 243 43.6
Cpa.g.sc58.97 Carica papaya HOM05D007130 ORTHO05D002078 1.9e-42 177.6 285 38.9
Gohir.A02G032600 Gossypium hirsutum HOM05D007130 ORTHO05D002078 1.9e-42 177.6 241 40.2
Thecc.04G233400 Theobroma cacao HOM05D007130 ORTHO05D002078 1.9e-42 177.6 243 42.0
BcaC09g49178 Brassica carinata HOM05D007130 ORTHO05D002078 4.2e-42 176.4 249 41.0
C01p41760 Brassica napus HOM05D007130 ORTHO05D002078 4.2e-42 176.4 249 41.0
BolC1t04132H Brassica oleracea HOM05D007130 ORTHO05D002078 4.2e-42 176.4 249 41.0
Gohir.D02G039300 Gossypium hirsutum HOM05D007130 ORTHO05D002078 5.5e-42 176.0 241 40.2
Gorai.005G043500 Gossypium raimondii HOM05D007130 ORTHO05D002078 5.5e-42 176.0 241 40.2
COL.COLO4_21489 Corchorus olitorius HOM05D007130 ORTHO05D002078 7.1e-42 175.6 237 42.6
Gohir.D09G218800 Gossypium hirsutum HOM05D007130 ORTHO05D002078 7.1e-42 175.6 244 41.0
CARHR098410 Cardamine hirsuta HOM05D007130 ORTHO05D002078 1.2e-41 174.9 245 41.2
Potri.008G153800 Populus trichocarpa HOM05D007130 ORTHO05D002078 1.2e-41 174.9 242 42.6
A01p32610 Brassica napus HOM05D007130 ORTHO05D002078 1.6e-41 174.5 249 40.6
BraA01t03389Z Brassica rapa HOM05D007130 ORTHO05D002078 1.6e-41 174.5 249 40.6
Gohir.A09G216400 Gossypium hirsutum HOM05D007130 ORTHO05D002078 1.6e-41 174.5 244 40.6
Gorai.006G239800 Gossypium raimondii HOM05D007130 ORTHO05D002078 1.6e-41 174.5 244 41.0
Sp3g20280 Schrenkiella parvula HOM05D007130 ORTHO05D002078 2.1e-41 174.1 249 40.6
BcaB04g20515 Brassica carinata HOM05D007130 ORTHO05D002078 2.7e-41 173.7 252 40.9
THA.LOC104808552 Tarenaya hassleriana HOM05D007130 ORTHO05D002078 4.6e-41 172.9 243 40.7
Aa31LG9G2460 Aethionema arabicum HOM05D007130 ORTHO05D002078 6.0e-41 172.6 249 42.2
Thhalv10020335m.g Eutrema salsugineum HOM05D007130 ORTHO05D002078 1.0e-40 171.8 356 35.1
Sabra10G0056800 Salix brachista HOM05D007130 ORTHO05D002078 1.0e-40 171.8 242 41.3
CARHR221400 Cardamine hirsuta HOM05D007130 ORTHO05D002078 3.0e-40 170.2 252 40.5
AL7G41010 Arabidopsis lyrata HOM05D007130 ORTHO05D002078 6.7e-40 169.1 246 39.4
A03p42790 Brassica napus HOM05D007130 ORTHO05D002078 6.7e-40 169.1 245 40.0
Sp7g12990 Schrenkiella parvula HOM05D007130 ORTHO05D002078 1.1e-39 168.3 247 39.7
Aa31LG8G9060 Aethionema arabicum HOM05D007130 ORTHO05D002078 1.5e-39 167.9 245 38.0
BcaB02g07856 Brassica carinata HOM05D007130 ORTHO05D002078 1.5e-39 167.9 249 39.8
BraA03t13426Z Brassica rapa HOM05D007130 ORTHO05D002078 1.9e-39 167.5 245 38.8
BraA05t20581Z Brassica rapa HOM05D007130 ORTHO05D002078 2.5e-39 167.2 249 38.6
AT4G14840 Arabidopsis thaliana HOM05D007130 ORTHO05D002078 3.3e-39 166.8 247 39.3
A05p16760 Brassica napus HOM05D007130 ORTHO05D002078 4.3e-39 166.4 247 38.5
Carub.0007s2727 Capsella rubella HOM05D007130 ORTHO05D002078 5.7e-39 166.0 247 38.9
SHI00452 Sapria himalayana HOM05D007130 ORTHO05D002078 7.4e-39 165.6 247 40.5
Lalb_Chr09g0319881 Lupinus albus HOM05D007130 ORTHO05D002078 9.6e-39 165.2 238 40.8
Sabra08G0117300 Salix brachista HOM05D007130 ORTHO05D002078 9.6e-39 165.2 364 33.5
AT3G22520 Arabidopsis thaliana HOM05D007130 ORTHO05D002078 1.6e-38 164.5 362 34.0
BcaC08g44270 Brassica carinata HOM05D007130 ORTHO05D002078 1.6e-38 164.5 248 38.3
C06p16890 Brassica napus HOM05D007130 ORTHO05D002078 1.6e-38 164.5 248 38.3
BolC6t36885H Brassica oleracea HOM05D007130 ORTHO05D002078 1.6e-38 164.5 248 38.3
BcaC01g03442 Brassica carinata HOM05D007130 ORTHO05D002078 2.8e-38 163.7 245 39.2
C03p52560 Brassica napus HOM05D007130 ORTHO05D002078 2.8e-38 163.7 245 39.2
BolC3t17525H Brassica oleracea HOM05D007130 ORTHO05D002078 2.8e-38 163.7 245 38.8
Manes.15G029700 Manihot esculenta HOM05D007130 ORTHO05D002078 3.7e-38 163.3 248 39.5
AL3G36830 Arabidopsis lyrata HOM05D007130 ORTHO05D002078 4.8e-38 162.9 362 32.9
Carub.0003s2268 Capsella rubella HOM05D007130 ORTHO05D002078 8.2e-38 162.2 350 32.9
Potri.010G086700 Populus trichocarpa HOM05D007130 ORTHO05D002078 1.4e-37 161.4 243 39.9
BcaB06g26362 Brassica carinata HOM05D007130 ORTHO05D002078 6.9e-37 159.1 372 33.9
BraA05t21500Z Brassica rapa HOM05D007130 ORTHO05D002078 6.9e-37 159.1 247 38.5
BcaC05g28058 Brassica carinata HOM05D007130 ORTHO05D002078 3.4e-36 156.8 366 32.5
C05p40720 Brassica napus HOM05D007130 ORTHO05D002078 3.4e-36 156.8 366 32.5
BolC5t32817H Brassica oleracea HOM05D007130 ORTHO05D002078 3.4e-36 156.8 366 32.5
BcaC05g28042 Brassica carinata HOM05D007130 ORTHO05D002078 2.2e-35 154.1 366 32.8
C05p40640 Brassica napus HOM05D007130 ORTHO05D002078 2.2e-35 154.1 366 32.8
BolC5t32803H Brassica oleracea HOM05D007130 ORTHO05D002078 2.2e-35 154.1 366 32.8
A05p26240 Brassica napus HOM05D007130 ORTHO05D002078 1.9e-34 151.0 356 32.6
GSVIVG01023108001 Vitis vinifera HOM05D007130 ORTHO05D002078 9.7e-31 138.7 170 47.6
Phvul.007G237900 Phaseolus vulgaris HOM05D007130 ORTHO05D002078 1.8e-29 134.4 236 37.3
SHI01765 Sapria himalayana HOM05D007130 ORTHO05D002078 5.9e-28 129.4 259 35.1
Aa31sc50G40 Aethionema arabicum HOM05D007130 ORTHO05D002078 2.9e-27 127.1 194 40.2
VMungo0720G1198 Vigna mungo HOM05D007130 ORTHO05D002078 6.5e-27 125.9 240 33.3
Glyma.20G078300 Glycine max HOM05D007130 ORTHO05D002078 5.5e-26 122.9 236 35.6
Glyma.10G127200 Glycine max HOM05D007130 ORTHO05D002078 2.7e-25 120.6 238 34.9
Phvul.010G080100 Phaseolus vulgaris HOM05D007130 ORTHO05D002078 5.1e-24 116.3 236 33.5
Migut.G00345 Erythranthe guttata HOM05D007130 ORTHO05D002078 3.3e-23 113.6 252 32.9
Glyma.01G137900 Glycine max HOM05D007130 ORTHO05D002078 1.7e-22 111.3 277 30.7
Glyma.01G138200 Glycine max HOM05D007130 ORTHO05D002078 1.7e-22 111.3 277 30.7
SHI43343 Sapria himalayana HOM05D007130 ORTHO05D002078 4.8e-22 109.8 272 29.8
VMungo0331G0902 Vigna mungo HOM05D007130 ORTHO05D002078 8.2e-22 109.0 293 30.7
SHI15242 Sapria himalayana HOM05D007130 ORTHO05D002078 2.4e-21 107.5 238 33.2
DCAR_027220 Daucus carota HOM05D007130 ORTHO05D002078 1.5e-20 104.8 250 34.8
SHI22413 Sapria himalayana HOM05D007130 ORTHO05D002078 1.5e-20 104.8 255 31.0
SHI36601 Sapria himalayana HOM05D007130 ORTHO05D002078 3.3e-15 87.0 254 30.7
QL10p019789 Quercus lobata HOM05D007130 ORTHO05D002078 5.7e-15 86.3 215 27.4
Cpa.g.sc79.63 Carica papaya HOM05D007130 ORTHO05D002078 5.3e-13 79.7 164 35.4
Ciclev10023536m.g Citrus clementina HOM05D007130 ORTHO05D002078 1.2e-12 78.6 229 27.5
VMungo1215G2341 Vigna mungo HOM05D007130 ORTHO05D002078 1.5e-10 71.6 216 31.9
VMungo0805G0001 Vigna mungo HOM05D007130 ORTHO05D002078 1.9e-10 71.2 101 37.6
VMungo0265G0002 Vigna mungo HOM05D007130 ORTHO05D002078 4.2e-10 70.1 123 34.1
SHI31593 Sapria himalayana HOM05D000105 ORTHO05D000001 4.7e-09 66.6 97 39.2
SHI15429 Sapria himalayana HOM05D007130 ORTHO05D002078 1.2e-07 62.0 206 29.6
GSVIVG01008104001 Vitis vinifera HOM05D000813 ORTHO05D000995 1.5e-07 61.6 197 27.4


User provided reference genes

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