Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004252g0010 Nicotiana tabacum HOM05D002293 ORTHO05D005475 1.2e-133 479.9 258 100.0
Nitab4.5_0001000g0170 Nicotiana tabacum HOM05D002293 ORTHO05D005475 1.4e-129 466.5 258 97.7
PGSC0003DMG400025052 Solanum tuberosum HOM05D002293 ORTHO05D005475 4.5e-117 424.9 258 89.9
Sopen04g028170 Solanum pennellii HOM05D002293 ORTHO05D005475 1.5e-115 419.9 258 88.8
Solyc04g072047.1 Solanum lycopersicum HOM05D002293 ORTHO05D005475 1.9e-115 419.5 258 88.4
CAN.G1252.8 Capsicum annuum HOM05D002293 ORTHO05D005475 1.0e-108 397.1 249 87.1
Migut.N02943 Erythranthe guttata HOM05D002293 ORTHO05D005475 9.2e-94 347.4 259 73.4
MSTRG.24489 Avicennia marina HOM05D002293 ORTHO05D005475 1.0e-92 344.0 259 73.7
Dinv41022 Davidia involucrata HOM05D002293 ORTHO05D005475 4.7e-90 335.1 258 70.5
Hma1.2p1_2282F.1_g318820 Hydrangea macrophylla HOM05D002293 ORTHO05D005475 4.7e-90 335.1 258 71.7
Eucgr.H04880 Eucalyptus grandis HOM05D002293 ORTHO05D005475 2.0e-88 329.7 258 71.7
SalBow6G4022 Salvia bowleyana HOM05D002293 ORTHO05D005475 4.4e-88 328.6 260 69.6
Hma1.2p1_0358F.1_g134890 Hydrangea macrophylla HOM05D002293 ORTHO05D005475 7.6e-88 327.8 258 70.2
Ciclev10026373m.g Citrus clementina HOM05D002293 ORTHO05D005475 2.2e-87 326.2 258 72.1
Gohir.D11G228400 Gossypium hirsutum HOM05D002293 ORTHO05D005475 2.2e-87 326.2 258 69.0
Duzib264G1168 Durio zibethinus HOM05D002293 ORTHO05D005475 2.9e-87 325.9 258 69.8
GSVIVG01022249001 Vitis vinifera HOM05D002293 ORTHO05D005475 2.9e-87 325.9 258 70.5
Actinidia12214 Actinidia chinensis HOM05D002293 ORTHO05D005475 3.7e-87 325.5 258 70.9
Oeu046075.1 Olea europaea HOM05D002293 ORTHO05D005475 3.7e-87 325.5 259 69.1
CiPaw.04G090200 Carya illinoinensis HOM05D002293 ORTHO05D005475 6.4e-87 324.7 259 69.9
Nn3g18603 Nelumbo nucifera HOM05D002293 ORTHO05D005475 1.4e-86 323.6 258 69.8
Gohir.A11G196900 Gossypium hirsutum HOM05D002293 ORTHO05D005475 7.1e-86 321.2 258 69.0
Sc03g0004490 Simmondsia chinensis HOM05D002293 ORTHO05D005475 9.2e-86 320.9 258 71.3
Dinv42674 Davidia involucrata HOM05D002293 ORTHO05D005475 2.1e-85 319.7 258 69.4
PGR102G1541 Punica granatum HOM05D002293 ORTHO05D005475 2.7e-85 319.3 258 69.8
Aqoxy6G00441 Aquilegia oxysepala HOM05D002293 ORTHO05D005475 3.5e-85 318.9 259 70.7
CiPaw.03G133000 Carya illinoinensis HOM05D002293 ORTHO05D005475 3.5e-85 318.9 258 69.8
Gohir.A11G054000 Gossypium hirsutum HOM05D002293 ORTHO05D005475 3.5e-85 318.9 258 70.5
Gohir.D11G057500 Gossypium hirsutum HOM05D002293 ORTHO05D005475 3.5e-85 318.9 258 70.5
PSO675G2787 Papaver somniferum HOM05D002293 ORTHO05D005475 1.0e-84 317.4 258 69.4
Glyma.05G184800 Glycine max HOM05D002293 ORTHO05D005475 1.7e-84 316.6 259 69.5
vmacro08972 Vaccinium macrocarpon HOM05D002293 ORTHO05D005475 1.7e-84 316.6 258 69.4
PSO541G6166 Papaver somniferum HOM05D002293 ORTHO05D005475 2.3e-84 316.2 258 69.0
CSS0016943 Camellia sinensis var. sinensis HOM05D002293 ORTHO05D005475 3.0e-84 315.8 258 67.4
arahy.Tifrunner.gnm1.ann1.GC7XSK Arachis hypogaea HOM05D002293 ORTHO05D005475 3.9e-84 315.5 258 68.2
MD01G1021000 Malus domestica HOM05D002293 ORTHO05D005475 3.9e-84 315.5 258 69.0
Cfa002767 Carpinus fangiana HOM05D002293 ORTHO05D005475 5.1e-84 315.1 258 67.4
Actinidia05381 Actinidia chinensis HOM05D002293 ORTHO05D005475 6.6e-84 314.7 258 67.8
Haze_25060 Corylus avellana HOM05D002293 ORTHO05D005475 6.6e-84 314.7 258 66.7
Glyma.08G142800 Glycine max HOM05D002293 ORTHO05D005475 6.6e-84 314.7 259 69.1
Gorai.007G062700 Gossypium raimondii HOM05D002293 ORTHO05D005475 8.6e-84 314.3 258 69.8
MD15G1331100 Malus domestica HOM05D002293 ORTHO05D005475 8.6e-84 314.3 258 68.6
Manes.12G143700 Manihot esculenta HOM05D002293 ORTHO05D005475 8.6e-84 314.3 258 69.0
Thecc.01G115200 Theobroma cacao HOM05D002293 ORTHO05D005475 8.6e-84 314.3 258 67.8
Cpa.g.sc72.4 Carica papaya HOM05D002293 ORTHO05D005475 1.1e-83 313.9 258 69.4
QL06p031785 Quercus lobata HOM05D002293 ORTHO05D005475 1.1e-83 313.9 257 68.1
Prupe.6G169300 Prunus persica HOM05D002293 ORTHO05D005475 1.9e-83 313.2 258 68.6
Atru.chr4.451 Acer truncatum HOM05D002293 ORTHO05D005475 3.3e-83 312.4 258 68.2
Potri.007G079500 Populus trichocarpa HOM05D002293 ORTHO05D005475 4.3e-83 312.0 258 67.1
SGA_v2.0_scaffold54G19692 Striga asiatica HOM05D002293 ORTHO05D005475 5.6e-83 311.6 259 70.3
FvH4_1g22890 Fragaria vesca HOM05D002293 ORTHO05D005475 1.1e-81 307.4 258 68.2
HanXRQChr04g0115601 Helianthus annuus HOM05D002293 ORTHO05D005475 1.4e-81 307.0 255 69.0
Lsat_1_v5_gn_9_42461 Lactuca sativa HOM05D002293 ORTHO05D005475 1.4e-81 307.0 254 67.3
RcHm_v2.0_Chr2g0117231 Rosa chinensis HOM05D002293 ORTHO05D005475 1.4e-81 307.0 258 67.1
CsaV3_6G042260 Cucumis sativus L. HOM05D002293 ORTHO05D005475 3.1e-81 305.8 258 65.5
Nn5g28871 Nelumbo nucifera HOM05D002293 ORTHO05D005475 3.1e-81 305.8 260 67.3
Sed0002744 Sechium edule HOM05D002293 ORTHO05D005475 3.1e-81 305.8 258 66.3
CANSAT01G0963 Cannabis sativa HOM05D002293 ORTHO05D005475 4.0e-81 305.4 258 65.9
Thhalv10000307m.g Eutrema salsugineum HOM05D002293 ORTHO05D005475 4.0e-81 305.4 258 66.3
HanXRQChr02g0042411 Helianthus annuus HOM05D002293 ORTHO05D005475 4.0e-81 305.4 255 69.0
TWI31G0415 Tripterygium wilfordii HOM05D002293 ORTHO05D005475 4.0e-81 305.4 258 68.2
TWI75G0492 Tripterygium wilfordii HOM05D002293 ORTHO05D005475 5.2e-81 305.1 258 69.0
Sp4g00960 Schrenkiella parvula HOM05D002293 ORTHO05D005475 2.0e-80 303.1 258 65.5
BcaB06g27791 Brassica carinata HOM05D002293 ORTHO05D005475 2.6e-80 302.8 258 65.1
THA.LOC104804134 Tarenaya hassleriana HOM05D002293 ORTHO05D005475 3.4e-80 302.4 258 65.9
Ca_17689_v3 Cicer arietinum L. HOM05D002293 ORTHO05D005475 4.4e-80 302.0 259 66.8
AT2G21870 Arabidopsis thaliana HOM05D002293 ORTHO05D005475 9.9e-80 300.8 258 63.6
ECA247G2680 Erigeron canadensis HOM05D002293 ORTHO05D005475 9.9e-80 300.8 254 67.3
Oeu061454.1 Olea europaea HOM05D002293 ORTHO05D005475 9.9e-80 300.8 279 62.0
SGA_v2.0_scaffold364G49965 Striga asiatica HOM05D002293 ORTHO05D005475 9.9e-80 300.8 332 54.8
ATR0736G207 Amborella trichopoda HOM05D002293 ORTHO05D005475 1.3e-79 300.4 258 65.5
BcaC02g08759 Brassica carinata HOM05D002293 ORTHO05D005475 1.3e-79 300.4 258 65.1
C04p50970 Brassica napus HOM05D002293 ORTHO05D005475 1.3e-79 300.4 258 65.1
unitig_8.g4827 Utricularia gibba HOM05D002293 ORTHO05D005475 1.3e-79 300.4 259 65.3
Nn2g12418 Nelumbo nucifera HOM05D002293 ORTHO05D005475 1.7e-79 300.1 258 67.4
THA.LOC104824852 Tarenaya hassleriana HOM05D002293 ORTHO05D005475 1.7e-79 300.1 258 65.9
Lj4g0016673 Lotus japonicus HOM05D002293 ORTHO05D005475 2.2e-79 299.7 259 66.0
VMungo0251G0649 Vigna mungo HOM05D002293 ORTHO05D005475 2.2e-79 299.7 259 65.3
arahy.Tifrunner.gnm1.ann1.LE5EW2 Arachis hypogaea HOM05D002293 ORTHO05D005475 2.9e-79 299.3 294 60.5
BraA04t17281Z Brassica rapa HOM05D002293 ORTHO05D005475 2.9e-79 299.3 258 65.1
THA.LOC104807725 Tarenaya hassleriana HOM05D002293 ORTHO05D005475 4.9e-79 298.5 260 65.4
BcaB08g35009 Brassica carinata HOM05D002293 ORTHO05D005475 6.4e-79 298.1 258 65.1
Sabra07G0066700 Salix brachista HOM05D002293 ORTHO05D005475 6.4e-79 298.1 244 66.8
Medtr8g092040 Medicago truncatula HOM05D002293 ORTHO05D005475 1.1e-78 297.4 261 65.1
Potri.005G085500 Populus trichocarpa HOM05D002293 ORTHO05D005475 1.4e-78 297.0 258 65.1
Rhsim08G0005300 Rhododendron simsii HOM05D002293 ORTHO05D005475 1.4e-78 297.0 299 59.9
HPP92_010855 Vanilla planifolia HOM05D002293 ORTHO05D005475 1.4e-78 297.0 260 65.0
Phvul.002G265700 Phaseolus vulgaris HOM05D002293 ORTHO05D005475 1.9e-78 296.6 259 64.5
Gorai.007G246300 Gossypium raimondii HOM05D002293 ORTHO05D005475 4.2e-78 295.4 237 68.4
ClCG01G015980 Citrullus lanatus HOM05D002293 ORTHO05D005475 5.4e-78 295.0 240 66.7
A04p16460 Brassica napus HOM05D002293 ORTHO05D005475 7.1e-78 294.7 259 64.9
BolC4t26688H Brassica oleracea HOM05D002293 ORTHO05D005475 7.1e-78 294.7 262 63.0
BraA09t41184Z Brassica rapa HOM05D002293 ORTHO05D005475 7.1e-78 294.7 260 63.8
C08p41150 Brassica napus HOM05D002293 ORTHO05D005475 9.3e-78 294.3 258 64.3
BcaC07g41114 Brassica carinata HOM05D002293 ORTHO05D005475 2.1e-77 293.1 258 63.6
BolC8t51682H Brassica oleracea HOM05D002293 ORTHO05D005475 2.1e-77 293.1 258 63.6
Carub.0004s0090 Capsella rubella HOM05D002293 ORTHO05D005475 2.1e-77 293.1 258 62.8
A09p57920 Brassica napus HOM05D002293 ORTHO05D005475 2.7e-77 292.7 260 63.8
CARHR112910 Cardamine hirsuta HOM05D002293 ORTHO05D005475 2.7e-77 292.7 258 62.0
Lalb_Chr07g0184761 Lupinus albus HOM05D002293 ORTHO05D005475 2.7e-77 292.7 258 64.0
Dinv19470 Davidia involucrata HOM05D002293 ORTHO05D005475 4.6e-77 292.0 237 68.8
Lsat_1_v5_gn_1_5861 Lactuca sativa HOM05D002293 ORTHO05D005475 7.8e-77 291.2 297 59.6
EL10Ac6g14774 Beta vulgaris HOM05D002293 ORTHO05D005475 1.3e-76 290.4 258 63.2
Aa31LG7G14740 Aethionema arabicum HOM05D002293 ORTHO05D005475 5.1e-76 288.5 258 61.6
TPR.G20796 Trifolium pratense HOM05D002293 ORTHO05D005475 1.3e-74 283.9 262 64.1
AUR62003295 Chenopodium quinoa HOM05D002293 ORTHO05D005475 3.6e-74 282.3 259 62.9
Lj2A567T21 Lonicera japonica HOM05D002293 ORTHO05D005475 3.6e-74 282.3 211 72.0
TAR376G0974 Trochodendron aralioides HOM05D002293 ORTHO05D005475 3.6e-74 282.3 212 73.6
Lalb_Chr12g0203481 Lupinus albus HOM05D002293 ORTHO05D005475 1.8e-73 280.0 240 65.4
Sabra05G0070400 Salix brachista HOM05D002293 ORTHO05D005475 6.9e-73 278.1 307 55.4
Duzib147G0641 Durio zibethinus HOM05D002293 ORTHO05D005475 9.0e-73 277.7 238 66.8
Lj7A386T88 Lonicera japonica HOM05D002293 ORTHO05D005475 1.5e-72 276.9 211 72.0
Duzib187G0135 Durio zibethinus HOM05D002293 ORTHO05D005475 2.6e-72 276.2 211 71.6
Zm00001eb231220 Zea mays HOM05D002293 ORTHO05D005475 9.9e-72 274.2 260 61.5
Zm00001eb209000 Zea mays HOM05D002293 ORTHO05D005475 1.3e-71 273.9 260 61.5
Hund19634 Selenicereus undatus HOM05D002293 ORTHO05D005475 1.7e-71 273.5 259 62.5
AUR62027167 Chenopodium quinoa HOM05D002293 ORTHO05D005475 1.1e-70 270.8 241 63.1
FAN23G0553 Fragaria x ananassa HOM05D002293 ORTHO05D005475 1.4e-70 270.4 218 68.3
FAN26G3412 Fragaria x ananassa HOM05D002293 ORTHO05D005475 2.4e-70 269.6 218 67.9
FAN28G2749 Fragaria x ananassa HOM05D002293 ORTHO05D005475 4.2e-70 268.9 218 68.3
Sc16g0004130 Simmondsia chinensis HOM05D002293 ORTHO05D005475 7.1e-70 268.1 211 71.1
FAN19G1282 Fragaria x ananassa HOM05D002293 ORTHO05D005475 9.3e-70 267.7 218 67.9
Peaxi162Scf17813g00005 Petunia axillaris HOM05D002293 ORTHO05D005475 4.6e-69 265.4 148 95.3
MELO3C007468.2 Cucumis melo HOM05D002293 ORTHO05D005475 6.0e-69 265.0 211 66.8
DCAR_019970 Daucus carota HOM05D002293 ORTHO05D005475 3.9e-68 262.3 254 58.7
Ah.03g141640 Amaranthus hybridus HOM05D002293 ORTHO05D005475 3.3e-67 259.2 240 61.2
Ah.02g125930 Amaranthus hybridus HOM05D002293 ORTHO05D005475 3.6e-66 255.8 211 67.3
AL4G11180 Arabidopsis lyrata HOM05D002293 ORTHO05D005475 2.4e-65 253.1 211 63.0
Glyma.14G174100 Glycine max HOM05D002293 ORTHO05D005475 2.9e-63 246.1 190 71.1
Psat0s281g0080 Pisum sativum HOM05D002293 ORTHO05D005475 7.9e-61 238.0 259 55.6
COL.COLO4_10988 Corchorus olitorius HOM05D002293 ORTHO05D005475 4.3e-59 232.3 203 63.1
TAR381G0840 Trochodendron aralioides HOM05D002293 ORTHO05D005475 2.6e-56 223.0 196 62.8
Hund03526 Selenicereus undatus HOM05D002293 ORTHO05D005475 1.6e-53 213.8 237 55.3
TAR625G1205 Trochodendron aralioides HOM05D002293 ORTHO05D005475 7.9e-53 211.5 211 58.8
CDE04G0337 Ceratophyllum demersum HOM05D002293 ORTHO05D005475 1.2e-48 197.6 240 51.7
Zm00001eb114730 Zea mays HOM05D002293 ORTHO05D005475 3.3e-43 179.5 148 64.9
Haze_25047 Corylus avellana HOM05D002293 ORTHO05D005475 6.3e-42 175.3 150 59.3
Peaxi162Scf00226g00011 Petunia axillaris HOM05D002293 ORTHO05D005475 5.9e-40 168.7 96 89.6
Lalb_Chr13g0296261 Lupinus albus HOM05D002293 ORTHO05D005475 5.1e-36 155.6 112 74.1
vmacro12893 Vaccinium macrocarpon HOM05D002293 ORTHO05D005475 4.1e-33 146.0 183 50.3
Lalb_Chr13g0296251 Lupinus albus HOM05D002293 ORTHO05D005475 6.9e-33 145.2 147 57.8
Rhsim10G0148500 Rhododendron simsii HOM05D002293 ORTHO05D005475 6.9e-33 145.2 150 55.3
Mapoly0014s0184 Marchantia polymorpha HOM05D002293 ORTHO05D005475 1.4e-28 131.0 225 38.2
HPP92_010897 Vanilla planifolia HOM05D002293 ORTHO05D005475 3.0e-28 129.8 239 42.3
AagrBONN_evm.TU.Sc2ySwM_117.3341 Anthoceros agrestis HOM05D002293 ORTHO05D005475 4.8e-26 122.5 224 35.3
Pp3c9_7910 Physcomitrium patens HOM05D002293 ORTHO05D005475 1.0e-23 114.8 232 34.9
vmacro18642 Vaccinium macrocarpon HOM05D002293 ORTHO05D005475 2.5e-22 110.2 243 37.9
ATR0736G144 Amborella trichopoda HOM05D006066 ORTHO05D007720 5.2e-20 102.4 86 59.3
Nn8g40924 Nelumbo nucifera HOM05D002293 ORTHO05D005475 6.7e-20 102.1 249 37.3
CBR_g72646 Chara braunii HOM05D002293 ORTHO05D005475 8.8e-20 101.7 209 33.0
CBR_g39756 Chara braunii HOM05D002293 ORTHO05D005475 2.6e-19 100.1 209 33.5
unitig_744.g24089 Utricularia gibba HOM05D002293 ORTHO05D005475 1.3e-18 97.8 63 82.5
Gohir.D08G112008 Gossypium hirsutum HOM05D001556 ORTHO05D005475 6.1e-13 79.0 55 67.3
SEGI_39212 Sequoiadendron giganteum HOM05D002293 ORTHO05D005475 5.2e-12 75.9 64 68.8
Nn2g12848 Nelumbo nucifera HOM05D002293 ORTHO05D005475 2.8e-10 70.1 194 34.5
BcaC09g49352 Brassica carinata HOM05D000853 ORTHO05D000723 1.7e-07 60.8 40 85.0
BcaC08g42952 Brassica carinata HOM05D004411 ORTHO05D032662 2.2e-07 60.5 50 70.0


User provided reference genes

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