Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004251g0070 Nicotiana tabacum HOM05D006904 ORTHO05D008439 1.9e-165 585.9 319 100.0
Nitab4.5_0007063g0060 Nicotiana tabacum HOM05D006904 ORTHO05D008439 2.1e-140 502.7 325 88.0
Solyc08g083010.3 Solanum lycopersicum HOM05D006904 ORTHO05D008439 1.4e-131 473.4 315 84.1
Sopen08g031220 Solanum pennellii HOM05D006904 ORTHO05D008439 1.4e-131 473.4 315 84.1
CAN.G567.78 Capsicum annuum HOM05D006904 ORTHO05D008439 3.9e-126 455.3 323 82.7
PGSC0003DMG400012243 Solanum tuberosum HOM05D006904 ORTHO05D008439 7.3e-117 424.5 259 90.7
Peaxi162Scf00074g00356 Petunia axillaris HOM05D006904 ORTHO05D008439 5.6e-109 398.3 298 79.2
MSTRG.24864 Avicennia marina HOM05D006904 ORTHO05D008439 4.6e-95 352.1 314 65.6
Cfa011933 Carpinus fangiana HOM05D006904 ORTHO05D008439 6.2e-92 341.7 327 59.6
HanXRQChr07g0192161 Helianthus annuus HOM05D006904 ORTHO05D008439 1.4e-91 340.5 307 62.5
Potri.001G084500 Populus trichocarpa HOM05D006904 ORTHO05D008439 1.4e-91 340.5 319 61.8
Thecc.03G222200 Theobroma cacao HOM05D006904 ORTHO05D008439 1.4e-91 340.5 279 68.5
COL.COLO4_10787 Corchorus olitorius HOM05D006904 ORTHO05D008439 1.8e-91 340.1 292 63.4
Gohir.D12G240700 Gossypium hirsutum HOM05D006904 ORTHO05D008439 3.8e-89 332.4 287 64.1
Gorai.008G257800 Gossypium raimondii HOM05D006904 ORTHO05D008439 6.5e-89 331.6 319 59.9
Haze_09157 Corylus avellana HOM05D006904 ORTHO05D008439 8.4e-89 331.3 330 57.0
TAR629G0561 Trochodendron aralioides HOM05D006904 ORTHO05D008439 1.4e-88 330.5 326 59.8
Migut.A01096 Erythranthe guttata HOM05D006904 ORTHO05D008439 4.2e-88 328.9 324 59.3
Rhsim02G0251400 Rhododendron simsii HOM05D006904 ORTHO05D008439 4.2e-88 328.9 313 60.4
Oeu010740.1 Olea europaea HOM05D006904 ORTHO05D008439 5.5e-88 328.6 241 71.4
Dinv02287 Davidia involucrata HOM05D006904 ORTHO05D008439 7.2e-88 328.2 316 60.4
Gohir.A12G239500 Gossypium hirsutum HOM05D006904 ORTHO05D008439 1.6e-87 327.0 319 59.2
Haze_09163 Corylus avellana HOM05D006904 ORTHO05D008439 4.6e-87 325.5 327 57.8
Aqoxy5G04256 Aquilegia oxysepala HOM05D006904 ORTHO05D008439 7.9e-87 324.7 256 67.6
vmacro11509 Vaccinium macrocarpon HOM05D006904 ORTHO05D008439 1.8e-86 323.6 283 62.9
QL02p029228 Quercus lobata HOM05D006904 ORTHO05D008439 3.0e-86 322.8 320 59.7
ECA233G3570 Erigeron canadensis HOM05D006904 ORTHO05D008439 5.1e-86 322.0 254 68.1
Ciclev10021179m.g Citrus clementina HOM05D006904 ORTHO05D008439 8.7e-86 321.2 272 64.3
MD06G1117600 Malus domestica HOM05D006904 ORTHO05D008439 8.7e-86 321.2 261 67.0
MD14G1125000 Malus domestica HOM05D006904 ORTHO05D008439 5.7e-85 318.5 260 66.9
CSS0028351 Camellia sinensis var. sinensis HOM05D006904 ORTHO05D008439 2.2e-84 316.6 280 62.5
RcHm_v2.0_Chr7g0186801 Rosa chinensis HOM05D006904 ORTHO05D008439 6.3e-84 315.1 320 57.5
EL10Ac5g12440 Beta vulgaris HOM05D006904 ORTHO05D008439 4.1e-83 312.4 300 57.0
Hma1.2p1_0456F.1_g156570 Hydrangea macrophylla HOM05D006904 ORTHO05D008439 2.0e-82 310.1 248 68.1
Lj8A201G80 Lonicera japonica HOM05D006904 ORTHO05D008439 2.6e-82 309.7 244 66.8
TWI81G0826 Tripterygium wilfordii HOM05D006904 ORTHO05D008439 2.6e-82 309.7 263 65.8
Actinidia04169 Actinidia chinensis HOM05D006904 ORTHO05D008439 2.9e-81 306.2 308 57.5
Cc08_g16680 Coffea canephora HOM05D006904 ORTHO05D008439 3.8e-81 305.8 284 61.3
Sabra01G0061300 Salix brachista HOM05D006904 ORTHO05D008439 3.8e-81 305.8 362 53.0
MBI04_g44912_MAGBIO Magnolia biondii HOM05D006904 ORTHO05D008439 8.5e-81 304.7 319 55.8
arahy.Tifrunner.gnm1.ann1.U3Q9D7 Arachis hypogaea HOM05D006904 ORTHO05D008439 3.2e-80 302.8 287 59.9
GSVIVG01019640001 Vitis vinifera HOM05D006904 ORTHO05D008439 4.2e-80 302.4 264 62.1
SGA_v2.0_scaffold104G30265 Striga asiatica HOM05D006904 ORTHO05D008439 5.5e-80 302.0 326 55.5
ClCG10G000840 Citrullus lanatus HOM05D006904 ORTHO05D008439 1.2e-79 300.8 285 60.0
THA.LOC104813055 Tarenaya hassleriana HOM05D006904 ORTHO05D008439 1.6e-79 300.4 296 57.1
Atru.chr9.1900 Acer truncatum HOM05D006904 ORTHO05D008439 4.6e-79 298.9 242 67.8
PSO675G2501 Papaver somniferum HOM05D006904 ORTHO05D008439 6.1e-79 298.5 286 59.1
Lj2g0027548 Lotus japonicus HOM05D006904 ORTHO05D008439 1.0e-78 297.7 273 61.2
Lsat_1_v5_gn_6_9180 Lactuca sativa HOM05D000482 ORTHO05D000349 2.3e-78 296.6 286 61.2
Sc01g0010610 Simmondsia chinensis HOM05D006904 ORTHO05D008439 3.0e-78 296.2 261 64.0
Thhalv10025762m.g Eutrema salsugineum HOM05D006904 ORTHO05D008439 6.7e-78 295.0 277 58.5
MBI04_g21743_MAGBIO Magnolia biondii HOM05D006904 ORTHO05D008439 1.1e-77 294.3 246 63.4
AT4G24090 Arabidopsis thaliana HOM05D006904 ORTHO05D008439 2.5e-77 293.1 279 58.1
Prupe.5G128700 Prunus persica HOM05D006904 ORTHO05D008439 9.7e-77 291.2 318 56.0
Glyma.09G286200 Glycine max HOM05D006904 ORTHO05D008439 1.3e-76 290.8 262 61.5
Duzib205G0314 Durio zibethinus HOM05D006904 ORTHO05D008439 2.2e-76 290.0 279 60.6
PSO541G0496 Papaver somniferum HOM05D006904 ORTHO05D008439 2.8e-76 289.7 282 57.8
arahy.Tifrunner.gnm1.ann1.NJ37M5 Arachis hypogaea HOM05D006904 ORTHO05D008439 3.7e-76 289.3 303 56.4
Ah.12g053150 Amaranthus hybridus HOM05D006904 ORTHO05D008439 4.8e-76 288.9 272 61.4
Carub.0007s1701 Capsella rubella HOM05D006904 ORTHO05D008439 4.8e-76 288.9 266 59.8
FAN04G1837 Fragaria x ananassa HOM05D006904 ORTHO05D008439 2.4e-75 286.6 316 55.1
AL7G29200 Arabidopsis lyrata HOM05D006904 ORTHO05D008439 6.9e-75 285.0 300 54.7
A01p15360 Brassica napus HOM05D000458 ORTHO05D000951 1.5e-74 283.9 296 54.1
BcaC09g50912 Brassica carinata HOM05D006904 ORTHO05D008439 2.0e-74 283.5 296 54.1
C01p19310 Brassica napus HOM05D000458 ORTHO05D000951 2.0e-74 283.5 296 54.1
BolC1t01857H Brassica oleracea HOM05D000458 ORTHO05D000951 2.0e-74 283.5 296 54.1
BcaNung01113 Brassica carinata HOM05D006904 ORTHO05D008439 2.6e-74 283.1 279 55.9
CiPaw.12G078200 Carya illinoinensis HOM05D006904 ORTHO05D008439 3.4e-74 282.7 316 53.5
Ca_13963_v3 Cicer arietinum L. HOM05D006904 ORTHO05D008439 5.9e-74 282.0 247 63.2
BraA01t01480Z Brassica rapa HOM05D006904 ORTHO05D008439 7.7e-74 281.6 300 54.7
FAN18G2239 Fragaria x ananassa HOM05D006904 ORTHO05D008439 1.0e-73 281.2 267 59.6
FvH4_5g11010 Fragaria vesca HOM05D006904 ORTHO05D008439 1.3e-73 280.8 267 59.2
FAN13G1638 Fragaria x ananassa HOM05D006904 ORTHO05D008439 1.7e-73 280.4 317 53.9
Aa31LG6G7300 Aethionema arabicum HOM05D006904 ORTHO05D008439 3.8e-73 279.3 294 55.1
Hund11354 Selenicereus undatus HOM05D006904 ORTHO05D008439 6.5e-73 278.5 248 62.1
AUR62007044 Chenopodium quinoa HOM05D006904 ORTHO05D008439 1.1e-72 277.7 327 51.4
Phvul.002G333700 Phaseolus vulgaris HOM05D006904 ORTHO05D008439 2.5e-72 276.6 260 60.0
Eucgr.E01035 Eucalyptus grandis HOM05D006904 ORTHO05D008439 5.5e-72 275.4 256 58.6
Sp7g22050 Schrenkiella parvula HOM05D006904 ORTHO05D008439 1.2e-71 274.2 286 54.5
Psat1g000400 Pisum sativum HOM05D006904 ORTHO05D008439 7.9e-71 271.6 258 58.9
Medtr3g005290 Medicago truncatula HOM05D006904 ORTHO05D008439 5.1e-70 268.9 275 55.3
VMungo1309G0432 Vigna mungo HOM05D006904 ORTHO05D008439 3.3e-69 266.2 260 58.1
TPR.G25509 Trifolium pratense HOM05D006904 ORTHO05D008439 1.7e-68 263.8 251 57.8
CDE09G0165 Ceratophyllum demersum HOM05D006904 ORTHO05D008439 2.2e-68 263.5 289 55.0
CDE11G0025 Ceratophyllum demersum HOM05D006904 ORTHO05D008439 5.3e-67 258.8 304 52.3
MELO3C013778.2 Cucumis melo HOM05D006904 ORTHO05D008439 7.2e-64 248.4 283 53.0
CsaV3_3G000910 Cucumis sativus L. HOM05D006904 ORTHO05D008439 7.2e-64 248.4 283 53.0
CANSAT21G0222 Cannabis sativa HOM05D006904 ORTHO05D008439 9.4e-64 248.1 302 50.0
DCAR_006536 Daucus carota HOM05D006904 ORTHO05D008439 1.8e-62 243.8 240 55.8
PGR042G3610 Punica granatum HOM05D006904 ORTHO05D008439 1.8e-62 243.8 273 52.0
ATR0620G017 Amborella trichopoda HOM05D006904 ORTHO05D008439 6.7e-62 241.9 263 52.5
SalBow8G2695 Salvia bowleyana HOM05D006904 ORTHO05D008439 6.7e-62 241.9 312 49.4
Sed0025618 Sechium edule HOM05D006904 ORTHO05D008439 6.7e-62 241.9 215 63.7
Haze_16434 Corylus avellana HOM05D006904 ORTHO05D008439 1.6e-58 230.7 249 56.2
AUR62019908 Chenopodium quinoa HOM05D006904 ORTHO05D008439 2.0e-53 213.8 312 43.6
unitig_88.g27646 Utricularia gibba HOM05D006904 ORTHO05D008439 7.5e-53 211.8 304 43.4
Haze_14079 Corylus avellana HOM05D006904 ORTHO05D008439 2.2e-52 210.3 288 48.3
HPP92_025869 Vanilla planifolia HOM05D006904 ORTHO05D008439 3.7e-52 209.5 255 51.4
Manes.02G003600 Manihot esculenta HOM05D006904 ORTHO05D008439 2.7e-50 203.4 224 56.2
CARHR231490 Cardamine hirsuta HOM05D006904 ORTHO05D008439 1.3e-49 201.1 174 59.8
ECA246G4131 Erigeron canadensis HOM05D006904 ORTHO05D008439 1.5e-45 187.6 236 49.6
Os09g0529350 Oryza sativa ssp. japonica HOM05D006904 ORTHO05D008439 9.2e-43 178.3 179 57.0
Zm00001eb319140 Zea mays HOM05D006904 ORTHO05D008439 2.5e-40 170.2 242 47.1
Cpa.g.sc175.18 Carica papaya HOM05D006904 ORTHO05D008439 6.1e-39 165.6 148 63.5
SEGI_29366 Sequoiadendron giganteum HOM05D006904 ORTHO05D008439 8.0e-39 165.2 261 42.1
Aqoxy5G04252 Aquilegia oxysepala HOM05D006904 ORTHO05D008439 3.0e-38 163.3 145 63.4
Lsat_1_v5_gn_3_13720 Lactuca sativa HOM05D006904 ORTHO05D008439 5.7e-37 159.1 252 44.4
HanXRQChr06g0166841 Helianthus annuus HOM05D006904 ORTHO05D008439 4.6e-34 149.4 202 48.0
Pp3c9_20020 Physcomitrium patens HOM05D006904 ORTHO05D008439 5.8e-29 132.5 270 37.0
Nn5g30646 Nelumbo nucifera HOM05D006904 ORTHO05D008439 9.8e-29 131.7 116 63.8
AagrBONN_evm.TU.Sc2ySwM_228.3172 Anthoceros agrestis HOM05D006904 ORTHO05D008439 1.2e-21 108.2 298 31.2
Mapoly0033s0090 Marchantia polymorpha HOM05D006904 ORTHO05D008439 1.3e-20 104.8 267 31.8
SMO361G0353 Selaginella moellendorffii HOM05D006904 ORTHO05D008439 8.3e-20 102.1 139 42.4
CBR_g70738 Chara braunii HOM05D006904 ORTHO05D008439 1.9e-19 100.9 148 37.8
QL02p029244 Quercus lobata HOM05D006904 ORTHO05D008439 5.4e-19 99.4 141 48.2
MCO05G331 Micromonas commoda HOM05D006904 ORTHO05D008439 3.5e-18 96.7 244 33.6
BcaC09g50913 Brassica carinata HOM05D006904 ORTHO05D008439 3.9e-17 93.2 123 47.2
AUR62041665 Chenopodium quinoa HOM05D006904 ORTHO05D008439 5.1e-09 66.2 111 39.6
Cre02.g144850 Chlamydomonas reinhardtii HOM05D006904 ORTHO05D008439 8.6e-09 65.5 238 30.3
Aa31LG6G7320 Aethionema arabicum HOM05D003846 ORTHO05D004726 3.6e-07 60.1 132 34.1


User provided reference genes

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