Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004251g0020 Nicotiana tabacum HOM05D007894 ORTHO05D009691 1.3e-143 513.1 260 100.0
Nitab4.5_0007063g0010 Nicotiana tabacum HOM05D007894 ORTHO05D009691 5.2e-129 464.5 258 91.5
PGSC0003DMG400012120 Solanum tuberosum HOM05D007894 ORTHO05D009691 4.7e-106 388.3 260 80.0
Sopen08g031270 Solanum pennellii HOM05D007894 ORTHO05D009691 4.0e-97 358.6 259 77.6
Peaxi162Scf00074g00316 Petunia axillaris HOM05D007894 ORTHO05D009691 9.0e-89 330.9 259 70.3
Solyc08g083050.1 Solanum lycopersicum HOM05D007894 ORTHO05D009691 1.0e-76 290.8 262 66.0
Oeu043316.1 Olea europaea HOM05D007894 ORTHO05D009691 1.0e-68 264.2 263 57.0
Lj8P201T33 Lonicera japonica HOM05D007894 ORTHO05D009691 1.0e-63 247.7 263 56.3
Lsat_1_v5_gn_3_14101 Lactuca sativa HOM05D007894 ORTHO05D009691 9.7e-59 231.1 260 53.1
TAR629G0466 Trochodendron aralioides HOM05D007894 ORTHO05D009691 9.7e-59 231.1 265 54.3
Dinv12925 Davidia involucrata HOM05D007894 ORTHO05D009691 1.8e-57 226.9 248 55.6
MD14G1125500 Malus domestica HOM05D007894 ORTHO05D009691 1.2e-56 224.2 261 50.2
MSTRG.12199 Avicennia marina HOM05D007894 ORTHO05D009691 2.2e-55 219.9 259 52.9
TWI81G0638 Tripterygium wilfordii HOM05D007894 ORTHO05D009691 5.0e-55 218.8 258 48.4
COL.COLO4_10790 Corchorus olitorius HOM05D007894 ORTHO05D009691 4.2e-54 215.7 261 48.3
Prupe.5G129000 Prunus persica HOM05D007894 ORTHO05D009691 1.2e-53 214.2 252 47.6
MD06G1117900 Malus domestica HOM05D007894 ORTHO05D009691 2.7e-53 213.0 261 48.3
RcHm_v2.0_Chr7g0186841 Rosa chinensis HOM05D007894 ORTHO05D009691 6.7e-52 208.4 264 48.1
RcHm_v2.0_Chr7g0186241 Rosa chinensis HOM05D007894 ORTHO05D009691 2.6e-51 206.5 251 49.4
Thecc.03G221700 Theobroma cacao HOM05D007894 ORTHO05D009691 2.8e-50 203.0 260 46.2
FAN08G2177 Fragaria x ananassa HOM05D007894 ORTHO05D009691 4.8e-50 202.2 261 47.9
CiPaw.11G113300 Carya illinoinensis HOM05D007894 ORTHO05D009691 1.1e-49 201.1 263 46.0
FAN13G0186 Fragaria x ananassa HOM05D007894 ORTHO05D009691 1.1e-49 201.1 257 49.0
Aqoxy7G00025 Aquilegia oxysepala HOM05D007894 ORTHO05D009691 1.8e-49 200.3 259 50.6
PGR042G1438 Punica granatum HOM05D007894 ORTHO05D009691 1.8e-49 200.3 273 48.0
FvH4_5g10980 Fragaria vesca HOM05D007894 ORTHO05D009691 2.4e-49 199.9 257 48.6
Haze_09166 Corylus avellana HOM05D007894 ORTHO05D009691 3.1e-49 199.5 259 44.8
FAN04G2047 Fragaria x ananassa HOM05D007894 ORTHO05D009691 3.1e-49 199.5 258 48.1
FAN18G0782 Fragaria x ananassa HOM05D007894 ORTHO05D009691 3.1e-49 199.5 257 48.2
Sed0027072 Sechium edule HOM05D007894 ORTHO05D009691 7.0e-49 198.4 260 46.9
MBI12_g30970_MAGBIO Magnolia biondii HOM05D007894 ORTHO05D009691 9.1e-49 198.0 263 49.0
Aa31LG6G7360 Aethionema arabicum HOM05D007894 ORTHO05D009691 1.2e-48 197.6 259 47.1
Atru.chr9.1896 Acer truncatum HOM05D007894 ORTHO05D009691 2.0e-48 196.8 262 46.2
BcaNung01115 Brassica carinata HOM05D007894 ORTHO05D009691 5.9e-48 195.3 268 45.9
HanXRQChr03g0086121 Helianthus annuus HOM05D007894 ORTHO05D009691 2.9e-47 193.0 263 46.8
QL02p028226 Quercus lobata HOM05D007894 ORTHO05D009691 8.5e-47 191.4 270 44.4
Sp7g22070 Schrenkiella parvula HOM05D007894 ORTHO05D009691 1.1e-46 191.0 266 45.1
Duzib084G0115 Durio zibethinus HOM05D007894 ORTHO05D009691 1.9e-46 190.3 259 44.4
ClCG01G001550 Citrullus lanatus HOM05D007894 ORTHO05D009691 2.5e-46 189.9 255 47.8
Gohir.A12G239800 Gossypium hirsutum HOM05D007894 ORTHO05D009691 2.5e-46 189.9 269 43.1
Gorai.008G258200 Gossypium raimondii HOM05D007894 ORTHO05D009691 2.5e-46 189.9 261 44.1
THA.LOC104815238 Tarenaya hassleriana HOM05D007894 ORTHO05D009691 2.5e-46 189.9 261 46.7
MELO3C005782.2 Cucumis melo HOM05D007894 ORTHO05D009691 1.6e-45 187.2 272 45.2
ECA246G0434 Erigeron canadensis HOM05D007894 ORTHO05D009691 2.1e-45 186.8 270 47.4
Manes.02G003300 Manihot esculenta HOM05D007894 ORTHO05D009691 8.0e-45 184.9 271 43.9
Cfa011931 Carpinus fangiana HOM05D007894 ORTHO05D009691 2.3e-44 183.3 257 40.9
Sc16g0010770 Simmondsia chinensis HOM05D007894 ORTHO05D009691 2.3e-44 183.3 257 45.1
Cpa.g.sc175.21 Carica papaya HOM05D007894 ORTHO05D009691 6.7e-44 181.8 253 44.7
DCAR_006541 Daucus carota HOM05D007894 ORTHO05D009691 2.6e-43 179.9 274 47.1
Carub.0007s1699 Capsella rubella HOM05D007894 ORTHO05D009691 5.7e-43 178.7 264 42.0
Ciclev10021739m.g Citrus clementina HOM05D007894 ORTHO05D009691 7.5e-43 178.3 257 45.9
Gohir.D12G241000 Gossypium hirsutum HOM05D007894 ORTHO05D009691 7.5e-43 178.3 260 42.7
CsaV3_5G001720 Cucumis sativus L. HOM05D007894 ORTHO05D009691 9.7e-43 177.9 267 44.6
Nn3g18883 Nelumbo nucifera HOM05D007894 ORTHO05D009691 4.8e-42 175.6 282 42.9
CiPaw.12G077900 Carya illinoinensis HOM05D007894 ORTHO05D009691 3.5e-40 169.5 278 42.4
PSO170G2911 Papaver somniferum HOM05D007894 ORTHO05D009691 5.9e-40 168.7 278 41.0
BcaC09g50910 Brassica carinata HOM05D007894 ORTHO05D009691 7.7e-40 168.3 267 42.7
CANSAT21G2064 Cannabis sativa HOM05D007894 ORTHO05D009691 7.7e-40 168.3 259 43.6
Thhalv10026087m.g Eutrema salsugineum HOM05D007894 ORTHO05D009691 1.0e-39 167.9 262 41.6
Gohir.D08G123100 Gossypium hirsutum HOM05D007894 ORTHO05D009691 1.3e-39 167.5 277 41.9
C01p19320 Brassica napus HOM05D007894 ORTHO05D009691 2.2e-39 166.8 261 42.9
BolC1t01858H Brassica oleracea HOM05D007894 ORTHO05D009691 2.2e-39 166.8 261 42.9
Gohir.A08G110200 Gossypium hirsutum HOM05D007894 ORTHO05D009691 2.2e-39 166.8 270 41.9
A01p15370 Brassica napus HOM05D007894 ORTHO05D009691 3.8e-39 166.0 265 42.6
Gorai.004G129900 Gossypium raimondii HOM05D007894 ORTHO05D009691 3.8e-39 166.0 277 41.5
Potri.001G082500 Populus trichocarpa HOM05D007894 ORTHO05D009691 5.0e-39 165.6 252 40.1
Potri.003G147800 Populus trichocarpa HOM05D007894 ORTHO05D009691 1.5e-38 164.1 258 41.1
Sabra03G0106300 Salix brachista HOM05D007894 ORTHO05D009691 1.8e-36 157.1 250 42.4
CARHR231510 Cardamine hirsuta HOM05D007894 ORTHO05D009691 4.0e-36 156.0 268 40.7
Migut.O00947 Erythranthe guttata HOM05D007894 ORTHO05D009691 4.4e-35 152.5 223 48.4
AL7G29180 Arabidopsis lyrata HOM05D007894 ORTHO05D009691 5.4e-33 145.6 266 38.7
AT4G24110 Arabidopsis thaliana HOM05D007894 ORTHO05D009691 5.0e-31 139.0 264 37.1
Ah.03g148140 Amaranthus hybridus HOM05D007894 ORTHO05D009691 6.5e-31 138.7 270 37.4
CDE07G1250 Ceratophyllum demersum HOM05D006631 ORTHO05D008359 1.1e-30 137.9 208 42.8
Sabra03G0107400 Salix brachista HOM05D001294 ORTHO05D009691 2.5e-30 136.7 247 37.7
Actinidia22204 Actinidia chinensis HOM05D007894 ORTHO05D009691 1.2e-21 107.8 112 50.0
PSO017G1799 Papaver somniferum HOM05D007894 ORTHO05D009691 2.1e-21 107.1 189 41.3
Zm00001eb000900 Zea mays HOM05D019640 ORTHO05D009691 5.8e-19 99.0 256 35.5
CDE12G0970 Ceratophyllum demersum HOM05D007894 ORTHO05D009691 6.6e-15 85.5 175 33.7
CDE04G0050 Ceratophyllum demersum HOM05D000458 ORTHO05D000951 8.6e-15 85.1 238 30.3
unitig_62.g23645 Utricularia gibba HOM05D007894 ORTHO05D009691 1.4e-12 77.8 136 44.9
Lj6g0022493 Lotus japonicus HOM05D007894 ORTHO05D009691 1.2e-11 74.7 268 27.6
HPP92_007394 Vanilla planifolia HOM05D007894 ORTHO05D009691 3.4e-11 73.2 144 40.3
FAN10G4307 Fragaria x ananassa HOM05D007894 ORTHO05D009691 4.9e-10 69.3 92 41.3
HanXRQChr03g0061161 Helianthus annuus HOM05D001555 ORTHO05D001616 8.3e-10 68.6 203 25.1
SEGI_01002 Sequoiadendron giganteum HOM05D001555 ORTHO05D009691 8.3e-10 68.6 209 30.6
unitig_62.g23646 Utricularia gibba HOM05D007894 ORTHO05D009691 3.2e-09 66.6 78 46.2
SEGI_23142 Sequoiadendron giganteum HOM05D001555 ORTHO05D009691 4.1e-09 66.2 168 31.5
ATR0620G121 Amborella trichopoda HOM05D007894 ORTHO05D009691 1.6e-08 64.3 143 30.8
Actinidia00523 Actinidia chinensis HOM05D001555 ORTHO05D001616 1.3e-07 61.2 180 27.2
MELO3C010938.2 Cucumis melo HOM05D001555 ORTHO05D001616 1.3e-07 61.2 198 26.8
ECA240G2473 Erigeron canadensis HOM05D004278 ORTHO05D005544 1.3e-07 61.2 201 23.9
DCAR_003675 Daucus carota HOM05D001555 ORTHO05D001616 3.9e-07 59.7 187 28.3
Nitab4.5_0000200g0140 Nicotiana tabacum HOM05D001555 ORTHO05D001616 8.6e-07 58.5 202 28.2
Oeu042616.1 Olea europaea HOM05D040519 ORTHO05D009691 1.9e-06 57.4 118 32.2
Ciclev10028884m.g Citrus clementina HOM05D001555 ORTHO05D001616 2.5e-06 57.0 193 23.8
CsaV3_2G028650 Cucumis sativus L. HOM05D001555 ORTHO05D001616 2.5e-06 57.0 198 25.3
Oeu042611.1 Olea europaea HOM05D040519 ORTHO05D009691 2.5e-06 57.0 118 32.2
QL12p018928 Quercus lobata HOM05D001555 ORTHO05D001616 4.3e-06 56.2 197 25.9
Sabra14G0065200 Salix brachista HOM05D001555 ORTHO05D001616 4.3e-06 56.2 197 27.4
ClCG05G019020 Citrullus lanatus HOM05D001555 ORTHO05D001616 5.6e-06 55.8 190 23.2
Actinidia22548 Actinidia chinensis HOM05D001555 ORTHO05D001616 7.3e-06 55.5 189 22.8
CANSAT80G1551 Cannabis sativa HOM05D001555 ORTHO05D001616 7.3e-06 55.5 197 25.4
COL.COLO4_25929 Corchorus olitorius HOM05D001555 ORTHO05D001616 7.3e-06 55.5 198 23.2
Prupe.8G097300 Prunus persica HOM05D001555 ORTHO05D001616 7.3e-06 55.5 195 24.1
CSS0017756 Camellia sinensis var. sinensis HOM05D001555 ORTHO05D001616 9.5e-06 55.1 193 21.2


User provided reference genes

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