Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004243g0030 Nicotiana tabacum HOM05D006899 ORTHO05D008566 2.7e-68 261.9 136 100.0
Nitab4.5_0004950g0010 Nicotiana tabacum HOM05D006899 ORTHO05D008566 7.9e-36 154.1 89 93.3
Nitab4.5_0009604g0020 Nicotiana tabacum HOM05D006899 ORTHO05D008566 7.9e-36 154.1 89 93.3
Nitab4.5_0001883g0020 Nicotiana tabacum HOM05D006899 ORTHO05D008566 3.5e-28 128.6 84 85.7
Nitab4.5_0002251g0050 Nicotiana tabacum HOM05D006899 ORTHO05D008566 3.5e-28 128.6 84 85.7
Peaxi162Scf00111g00221 Petunia axillaris HOM05D006899 ORTHO05D008566 8.7e-27 124.0 83 81.9
PGSC0003DMG400017304 Solanum tuberosum HOM05D006899 ORTHO05D008566 2.5e-26 122.5 84 81.0
AT2G42975 Arabidopsis thaliana HOM05D006899 ORTHO05D008566 3.3e-26 122.1 83 81.9
Lalb_Chr04g0248871 Lupinus albus HOM05D006899 ORTHO05D008566 4.3e-26 121.7 86 76.7
Lj1P601T16 Lonicera japonica HOM05D006899 ORTHO05D008566 7.4e-26 120.9 83 80.7
Sopen07g029600 Solanum pennellii HOM05D006899 ORTHO05D008566 7.4e-26 120.9 84 79.8
MSTRG.12841 Avicennia marina HOM05D006899 ORTHO05D008566 9.7e-26 120.6 86 76.7
BcaB06g29274 Brassica carinata HOM05D006899 ORTHO05D008566 1.3e-25 120.2 83 79.5
Solyc07g056240.3 Solanum lycopersicum HOM05D006899 ORTHO05D008566 1.3e-25 120.2 84 78.6
Ciclev10032884m.g Citrus clementina HOM05D006899 ORTHO05D008566 1.6e-25 119.8 83 75.9
GSVIVG01020847001 Vitis vinifera HOM05D006899 ORTHO05D008566 1.6e-25 119.8 83 78.3
SalBow7G1887 Salvia bowleyana HOM05D006899 ORTHO05D008566 2.2e-25 119.4 84 76.2
AL4G41610 Arabidopsis lyrata HOM05D006899 ORTHO05D008566 2.8e-25 119.0 83 79.5
BcaC02g07213 Brassica carinata HOM05D006899 ORTHO05D008566 2.8e-25 119.0 83 78.3
C04p70000 Brassica napus HOM05D006899 ORTHO05D008566 2.8e-25 119.0 83 78.3
BolC4t28500H Brassica oleracea HOM05D006899 ORTHO05D008566 2.8e-25 119.0 83 78.3
Oeu013822.1 Olea europaea HOM05D006899 ORTHO05D008566 2.8e-25 119.0 83 75.9
Oeu020934.1 Olea europaea HOM05D006899 ORTHO05D008566 2.8e-25 119.0 83 75.9
MELO3C026968.2 Cucumis melo HOM05D006899 ORTHO05D008566 3.7e-25 118.6 83 77.1
SGA_v2.0_scaffold4G02123 Striga asiatica HOM05D006899 ORTHO05D008566 3.7e-25 118.6 84 75.0
Cc05_g09700 Coffea canephora HOM05D006899 ORTHO05D008566 4.8e-25 118.2 83 75.9
vmacro09192 Vaccinium macrocarpon HOM05D006899 ORTHO05D008566 4.8e-25 118.2 83 78.3
Thhalv10017256m.g Eutrema salsugineum HOM05D006899 ORTHO05D008566 6.3e-25 117.9 83 78.3
Gorai.001G092300 Gossypium raimondii HOM05D006899 ORTHO05D008566 6.3e-25 117.9 83 75.9
BNapus_Darmor_BZH_scaffold_64p00160 Brassica napus HOM05D006899 ORTHO05D008566 8.2e-25 117.5 83 78.3
BraA04t18701Z Brassica rapa HOM05D006899 ORTHO05D008566 8.2e-25 117.5 83 78.3
Carub.0004s2544 Capsella rubella HOM05D006899 ORTHO05D008566 8.2e-25 117.5 83 78.3
ClCG11G016470 Citrullus lanatus HOM05D006899 ORTHO05D008566 8.2e-25 117.5 83 77.1
CsaV3_4G031920 Cucumis sativus L. HOM05D006899 ORTHO05D008566 8.2e-25 117.5 83 75.9
Gohir.D07G086300 Gossypium hirsutum HOM05D006899 ORTHO05D008566 8.2e-25 117.5 83 74.7
Potri.005G204200 Populus trichocarpa HOM05D006899 ORTHO05D008566 8.2e-25 117.5 79 79.7
QL08p044873 Quercus lobata HOM05D006899 ORTHO05D008566 8.2e-25 117.5 83 75.9
Sp4g25100 Schrenkiella parvula HOM05D006899 ORTHO05D008566 8.2e-25 117.5 83 78.3
Aa31LG1G24750 Aethionema arabicum HOM05D006899 ORTHO05D008566 1.1e-24 117.1 83 78.3
Nn4g26539 Nelumbo nucifera HOM05D006899 ORTHO05D008566 1.1e-24 117.1 85 76.5
Phvul.008G193700 Phaseolus vulgaris HOM05D006899 ORTHO05D008566 1.1e-24 117.1 83 75.9
Sc13g0007020 Simmondsia chinensis HOM05D006899 ORTHO05D008566 1.1e-24 117.1 83 77.1
VMungo0647G1903 Vigna mungo HOM05D006899 ORTHO05D008566 1.1e-24 117.1 83 74.7
Cfa023072 Carpinus fangiana HOM05D006899 ORTHO05D008566 1.4e-24 116.7 81 76.5
TAR627G0648 Trochodendron aralioides HOM05D006899 ORTHO05D008566 1.4e-24 116.7 88 69.3
Atru.chr6.2058 Acer truncatum HOM05D006899 ORTHO05D008566 1.8e-24 116.3 81 76.5
CANSAT64G2357 Cannabis sativa HOM05D006899 ORTHO05D008566 1.8e-24 116.3 81 77.8
Hund24233 Selenicereus undatus HOM05D006899 ORTHO05D008566 2.4e-24 115.9 83 74.7
CARHR138030 Cardamine hirsuta HOM05D006899 ORTHO05D008566 3.1e-24 115.5 81 77.8
Migut.E01772 Erythranthe guttata HOM05D006899 ORTHO05D008566 3.1e-24 115.5 84 75.0
Gohir.A07G080700 Gossypium hirsutum HOM05D006899 ORTHO05D008566 3.1e-24 115.5 83 73.5
Cpa.g.sc50.104 Carica papaya HOM05D006899 ORTHO05D008566 4.1e-24 115.2 83 75.9
Haze_13530 Corylus avellana HOM05D006899 ORTHO05D008566 4.1e-24 115.2 83 73.5
LjContig00049g0021241 Lotus japonicus HOM05D006899 ORTHO05D008566 4.1e-24 115.2 84 73.8
Medtr5g091190 Medicago truncatula HOM05D006899 ORTHO05D008566 4.1e-24 115.2 86 72.1
Rhsim04G0081600 Rhododendron simsii HOM05D006899 ORTHO05D008566 5.3e-24 114.8 83 77.1
THA.LOC104803370 Tarenaya hassleriana HOM05D006899 ORTHO05D008566 5.3e-24 114.8 81 76.5
Sed0025977 Sechium edule HOM05D006899 ORTHO05D008566 6.9e-24 114.4 83 75.9
Actinidia03641 Actinidia chinensis HOM05D006899 ORTHO05D008566 9.0e-24 114.0 83 75.9
CiPaw.04G138700 Carya illinoinensis HOM05D006899 ORTHO05D008566 9.0e-24 114.0 83 72.3
Glyma.14G029700 Glycine max HOM05D006899 ORTHO05D008566 9.0e-24 114.0 83 73.5
Potri.002G058000 Populus trichocarpa HOM05D006899 ORTHO05D008566 1.2e-23 113.6 84 72.6
TPR.G12679 Trifolium pratense HOM05D006899 ORTHO05D008566 1.2e-23 113.6 84 73.8
PGR042G1005 Punica granatum HOM05D006899 ORTHO05D008566 1.5e-23 113.2 83 73.5
Glyma.02G285100 Glycine max HOM05D006899 ORTHO05D008566 2.0e-23 112.8 83 72.3
Duzib138G0065 Durio zibethinus HOM05D006899 ORTHO05D008566 2.6e-23 112.5 80 73.8
Eucgr.A02015 Eucalyptus grandis HOM05D006899 ORTHO05D008566 2.6e-23 112.5 84 73.8
Thecc.01G170200 Theobroma cacao HOM05D006899 ORTHO05D008566 2.6e-23 112.5 83 73.5
Prupe.3G176400 Prunus persica HOM05D006899 ORTHO05D008566 3.4e-23 112.1 83 74.7
arahy.Tifrunner.gnm1.ann1.226PX6 Arachis hypogaea HOM05D006899 ORTHO05D008566 7.6e-23 110.9 84 71.4
arahy.Tifrunner.gnm1.ann1.SNQ1P9 Arachis hypogaea HOM05D006899 ORTHO05D008566 7.6e-23 110.9 84 71.4
EL10Ac9g22843 Beta vulgaris HOM05D006899 ORTHO05D008566 7.6e-23 110.9 85 72.9
TWI59G0652 Tripterygium wilfordii HOM05D006899 ORTHO05D008566 7.6e-23 110.9 83 72.3
COL.COLO4_08896 Corchorus olitorius HOM05D006899 ORTHO05D008566 1.0e-22 110.5 83 72.3
MD09G1149700 Malus domestica HOM05D006899 ORTHO05D008566 1.3e-22 110.2 83 74.7
THA.LOC104802283 Tarenaya hassleriana HOM05D006899 ORTHO05D008566 1.3e-22 110.2 81 72.8
Ah.01g013620 Amaranthus hybridus HOM05D006899 ORTHO05D008566 1.7e-22 109.8 84 71.4
FAN02G3475 Fragaria x ananassa HOM05D006899 ORTHO05D008566 2.2e-22 109.4 83 72.3
FAN05G4631 Fragaria x ananassa HOM05D006899 ORTHO05D008566 2.2e-22 109.4 83 72.3
FAN09G4704 Fragaria x ananassa HOM05D006899 ORTHO05D008566 2.2e-22 109.4 83 72.3
FAN14G2046 Fragaria x ananassa HOM05D006899 ORTHO05D008566 2.2e-22 109.4 83 72.3
Manes.10G088300 Manihot esculenta HOM05D006899 ORTHO05D008566 2.2e-22 109.4 85 71.8
FvH4_6g38570 Fragaria vesca HOM05D006899 ORTHO05D008566 5.0e-22 108.2 83 71.1
MD17G1136600 Malus domestica HOM05D006899 ORTHO05D008566 8.5e-22 107.5 83 72.3
AUR62015134 Chenopodium quinoa HOM05D006899 ORTHO05D008566 1.1e-21 107.1 87 70.1
Sabra02G0047300 Salix brachista HOM05D006899 ORTHO05D008566 1.4e-21 106.7 87 69.0
RcHm_v2.0_Chr2g0151981 Rosa chinensis HOM05D006899 ORTHO05D008566 1.9e-21 106.3 83 69.9
AUR62017595 Chenopodium quinoa HOM05D006899 ORTHO05D008566 5.5e-21 104.8 87 67.8
Duzib133G1045 Durio zibethinus HOM05D006899 ORTHO05D008566 7.2e-21 104.4 84 65.5
Aqoxy1G02918 Aquilegia oxysepala HOM05D006899 ORTHO05D008566 9.4e-21 104.0 88 64.8
MBI10_g21113_MAGBIO Magnolia biondii HOM05D006899 ORTHO05D008566 1.4e-19 100.1 83 63.9
Dinv09142 Davidia involucrata HOM05D006899 ORTHO05D008566 3.0e-19 99.0 68 76.5
ECA233G0523 Erigeron canadensis HOM05D006899 ORTHO05D008566 2.5e-18 95.9 82 65.9
HanXRQChr17g0554721 Helianthus annuus HOM05D006899 ORTHO05D008566 9.7e-18 94.0 82 62.2
Lsat_1_v5_gn_8_137860 Lactuca sativa HOM05D006899 ORTHO05D008566 1.7e-17 93.2 79 64.6
CSS0032532 Camellia sinensis var. sinensis HOM05D006899 ORTHO05D008566 1.4e-16 90.1 82 62.2
ATR0585G139 Amborella trichopoda HOM05D006899 ORTHO05D008566 9.1e-16 87.4 86 55.8
unitig_60.g25592 Utricularia gibba HOM05D006899 ORTHO05D008566 3.4e-15 85.5 89 58.4
Os01g0666600 Oryza sativa ssp. japonica HOM05D006899 ORTHO05D008566 1.3e-14 83.6 90 52.2
CDE05G0801 Ceratophyllum demersum HOM05D006899 ORTHO05D008566 2.9e-14 82.4 85 54.1
Hund24244 Selenicereus undatus HOM05D006899 ORTHO05D008566 3.8e-14 82.0 55 74.5
HPP92_010055 Vanilla planifolia HOM05D006899 ORTHO05D008566 2.5e-13 79.3 91 52.7
PSO478G1301 Papaver somniferum HOM05D006899 ORTHO05D008566 9.4e-13 77.4 88 53.4
PSO541G6147 Papaver somniferum HOM05D006899 ORTHO05D008566 9.4e-13 77.4 88 53.4
PSO675G8667 Papaver somniferum HOM05D006899 ORTHO05D008566 9.4e-13 77.4 88 53.4
Nitab4.5_0002251g0080 Nicotiana tabacum HOM05D006899 ORTHO05D008566 3.6e-12 75.5 84 57.1
Zm00001eb157430 Zea mays HOM05D006899 ORTHO05D008566 4.7e-12 75.1 87 48.3
Pp3c13_6560 Physcomitrium patens HOM05D006899 ORTHO05D008566 6.7e-11 71.2 85 45.9
CSS0025344 Camellia sinensis var. sinensis HOM05D006899 ORTHO05D008566 4.4e-10 68.6 82 51.2
Mapoly0120s0054 Marchantia polymorpha HOM05D006899 ORTHO05D008566 1.3e-09 67.0 83 43.4
Medtr5g016040 Medicago truncatula HOM05D006899 ORTHO05D008566 3.7e-09 65.5 43 74.4
AagrBONN_evm.TU.Sc2ySwM_368.298 Anthoceros agrestis HOM05D006899 ORTHO05D008566 6.3e-09 64.7 86 41.9
SMO353G0201 Selaginella moellendorffii HOM05D006899 ORTHO05D008566 1.0e-06 57.4 66 51.5


User provided reference genes

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