Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004236g0090 Nicotiana tabacum HOM05D000076 ORTHO05D006651 5.1e-66 254.2 123 100.0
Lalb_Chr01g0012441 Lupinus albus HOM05D000076 ORTHO05D006651 8.2e-16 87.4 155 40.0
Nn8g39420 Nelumbo nucifera HOM05D000076 ORTHO05D006651 5.3e-15 84.7 155 38.7
Lj3g0009412 Lotus japonicus HOM05D000076 ORTHO05D006651 6.9e-15 84.3 155 38.7
CSS0012985 Camellia sinensis var. sinensis HOM05D000076 ORTHO05D006651 2.6e-14 82.4 155 38.1
TAR383G0753 Trochodendron aralioides HOM05D000076 ORTHO05D006651 2.6e-14 82.4 155 37.4
Nitab4.5_0001764g0030 Nicotiana tabacum HOM05D000076 ORTHO05D006651 5.9e-14 81.3 131 43.5
arahy.Tifrunner.gnm1.ann1.PKV768 Arachis hypogaea HOM05D000076 ORTHO05D006651 7.7e-14 80.9 155 36.1
Psat7g256240 Pisum sativum HOM05D000076 ORTHO05D006651 7.7e-14 80.9 155 38.1
Manes.11G054200 Manihot esculenta HOM05D000076 ORTHO05D006651 1.0e-13 80.5 155 36.8
Medtr4g010990 Medicago truncatula HOM05D000076 ORTHO05D006651 1.3e-13 80.1 155 37.4
vmacro16906 Vaccinium macrocarpon HOM05D000076 ORTHO05D006651 1.3e-13 80.1 155 38.1
arahy.Tifrunner.gnm1.ann1.BAYB07 Arachis hypogaea HOM05D000076 ORTHO05D006651 1.7e-13 79.7 155 36.1
Ca_20433_v3 Cicer arietinum L. HOM05D000076 ORTHO05D006651 1.7e-13 79.7 155 37.4
Ca_30892_v3 Cicer arietinum L. HOM05D000076 ORTHO05D006651 1.7e-13 79.7 155 37.4
Glyma.08G211300 Glycine max HOM05D000076 ORTHO05D006651 1.7e-13 79.7 134 40.3
VMungo0331G1252 Vigna mungo HOM05D000076 ORTHO05D006651 1.7e-13 79.7 134 41.0
CAN.G407.99 Capsicum annuum HOM05D000076 ORTHO05D006651 2.2e-13 79.3 132 43.2
Nitab4.5_0010254g0070 Nicotiana tabacum HOM05D000076 ORTHO05D006651 2.2e-13 79.3 131 42.7
Phvul.010G154600 Phaseolus vulgaris HOM05D000076 ORTHO05D006651 2.2e-13 79.3 155 38.1
Actinidia08805 Actinidia chinensis HOM05D000076 ORTHO05D006651 2.9e-13 79.0 155 36.8
Ciclev10025636m.g Citrus clementina HOM05D000076 ORTHO05D006651 2.9e-13 79.0 155 35.5
Sopen03g035460 Solanum pennellii HOM05D000076 ORTHO05D006651 3.8e-13 78.6 131 42.0
BcaB06g25679 Brassica carinata HOM05D000076 ORTHO05D006651 5.0e-13 78.2 106 44.3
MD17G1208100 Malus domestica HOM05D000076 ORTHO05D006651 5.0e-13 78.2 155 36.8
FvH4_6g30130 Fragaria vesca HOM05D000076 ORTHO05D006651 8.5e-13 77.4 155 36.8
Thecc.06G069500 Theobroma cacao HOM05D000076 ORTHO05D006651 8.5e-13 77.4 133 39.1
TPR.G38688 Trifolium pratense HOM05D000076 ORTHO05D006651 8.5e-13 77.4 155 36.8
Oeu015242.1 Olea europaea HOM05D000076 ORTHO05D006651 1.1e-12 77.0 155 37.4
Peaxi162Scf00332g00759 Petunia axillaris HOM05D000076 ORTHO05D006651 1.1e-12 77.0 153 37.9
Dinv38105 Davidia involucrata HOM05D000076 ORTHO05D006651 1.4e-12 76.6 155 36.1
Glyma.07G031500 Glycine max HOM05D000076 ORTHO05D006651 1.4e-12 76.6 155 36.8
Rhsim12G0192300 Rhododendron simsii HOM05D000076 ORTHO05D006651 1.4e-12 76.6 155 36.8
RcHm_v2.0_Chr2g0136181 Rosa chinensis HOM05D000076 ORTHO05D006651 1.9e-12 76.3 155 36.1
Potri.003G062600 Populus trichocarpa HOM05D000076 ORTHO05D006651 2.5e-12 75.9 155 36.1
FAN05G0493 Fragaria x ananassa HOM05D000076 ORTHO05D006651 3.2e-12 75.5 155 36.1
Lj5A69T35 Lonicera japonica HOM05D000076 ORTHO05D006651 3.2e-12 75.5 155 35.5
ECA232G2965 Erigeron canadensis HOM05D000076 ORTHO05D006651 5.5e-12 74.7 133 39.1
Migut.I00789 Erythranthe guttata HOM05D000076 ORTHO05D006651 5.5e-12 74.7 157 36.9
PSO455G0226 Papaver somniferum HOM05D000076 ORTHO05D006651 5.5e-12 74.7 155 34.8
Sabra03G0036400 Salix brachista HOM05D000076 ORTHO05D006651 5.5e-12 74.7 155 36.1
PSO170G4244 Papaver somniferum HOM05D000076 ORTHO05D006651 7.2e-12 74.3 135 37.0
TWI75G0213 Tripterygium wilfordii HOM05D000076 ORTHO05D006651 7.2e-12 74.3 155 34.2
Hund00540 Selenicereus undatus HOM05D000076 ORTHO05D006651 9.4e-12 73.9 135 37.0
PGSC0003DMG400000612 Solanum tuberosum HOM05D000076 ORTHO05D006651 9.4e-12 73.9 132 40.9
EL10Ac9g21920 Beta vulgaris HOM05D000076 ORTHO05D006651 1.2e-11 73.6 135 37.0
Sed0025008 Sechium edule HOM05D000076 ORTHO05D006651 1.2e-11 73.6 155 33.5
THA.LOC104815535 Tarenaya hassleriana HOM05D000076 ORTHO05D006651 1.2e-11 73.6 153 35.3
COL.COLO4_12922 Corchorus olitorius HOM05D000076 ORTHO05D006651 1.6e-11 73.2 155 34.8
Haze_16530 Corylus avellana HOM05D000076 ORTHO05D006651 1.6e-11 73.2 133 36.8
Prupe.3G082600 Prunus persica HOM05D000076 ORTHO05D006651 1.6e-11 73.2 155 36.1
Rhsim01G0208700 Rhododendron simsii HOM05D000076 ORTHO05D006651 1.6e-11 73.2 65 58.5
Gohir.D06G119800 Gossypium hirsutum HOM05D000076 ORTHO05D006651 2.1e-11 72.8 155 35.5
Gorai.010G137800 Gossypium raimondii HOM05D000076 ORTHO05D006651 2.1e-11 72.8 155 35.5
QL07p005211 Quercus lobata HOM05D000076 ORTHO05D006651 2.1e-11 72.8 133 36.8
Atru.chr1.3044 Acer truncatum HOM05D000076 ORTHO05D006651 2.7e-11 72.4 155 34.2
Ah.01g020760 Amaranthus hybridus HOM05D000076 ORTHO05D006651 2.7e-11 72.4 155 34.8
MELO3C023412.2 Cucumis melo HOM05D000076 ORTHO05D006651 2.7e-11 72.4 155 34.2
CsaV3_7G032510 Cucumis sativus L. HOM05D003484 ORTHO05D006651 2.7e-11 72.4 155 34.8
Gohir.A06G115000 Gossypium hirsutum HOM05D000076 ORTHO05D006651 2.7e-11 72.4 155 35.5
Hma1.2p1_0515F.1_g170160 Hydrangea macrophylla HOM05D000076 ORTHO05D006651 2.7e-11 72.4 155 34.2
MSTRG.11126 Avicennia marina HOM05D000076 ORTHO05D006651 3.6e-11 72.0 65 55.4
CiPaw.01G245600 Carya illinoinensis HOM05D000076 ORTHO05D006651 4.7e-11 71.6 155 33.5
ClCG09G002820 Citrullus lanatus HOM05D000076 ORTHO05D006651 4.7e-11 71.6 133 36.1
PGR102G0049 Punica granatum HOM05D000076 ORTHO05D006651 4.7e-11 71.6 135 37.0
GSVIVG01017295001 Vitis vinifera HOM05D000076 ORTHO05D006651 7.9e-11 70.9 155 36.1
A05p33720 Brassica napus HOM05D007418 ORTHO05D006651 1.0e-10 70.5 134 35.8
BraA05t22193Z Brassica rapa HOM05D000076 ORTHO05D006651 1.0e-10 70.5 134 35.8
AUR62011541 Chenopodium quinoa HOM05D000076 ORTHO05D006651 1.4e-10 70.1 65 52.3
AUR62016360 Chenopodium quinoa HOM05D000076 ORTHO05D006651 1.4e-10 70.1 65 52.3
Eucgr.F02536 Eucalyptus grandis HOM05D000076 ORTHO05D006651 1.4e-10 70.1 133 36.8
SGA_v2.0_scaffold5G02674 Striga asiatica HOM05D000076 ORTHO05D006651 1.4e-10 70.1 157 35.0
HanXRQChr09g0274961 Helianthus annuus HOM05D000076 ORTHO05D006651 1.8e-10 69.7 146 37.0
Sabra01G0140000 Salix brachista HOM05D000076 ORTHO05D006651 1.8e-10 69.7 156 35.3
Cc04_g04180 Coffea canephora HOM05D000076 ORTHO05D006651 2.3e-10 69.3 155 34.2
BcaB06g25673 Brassica carinata HOM05D000076 ORTHO05D006651 3.0e-10 68.9 134 36.6
CSS0019104 Camellia sinensis var. sinensis HOM05D000076 ORTHO05D006651 3.0e-10 68.9 65 53.8
Sc12g0008690 Simmondsia chinensis HOM05D000076 ORTHO05D006651 3.0e-10 68.9 155 32.3
Thhalv10020754m.g Eutrema salsugineum HOM05D000076 ORTHO05D006651 3.9e-10 68.6 134 36.6
Nn2g12010 Nelumbo nucifera HOM05D000076 ORTHO05D006651 3.9e-10 68.6 67 50.7
CiPaw.03G141200 Carya illinoinensis HOM05D000076 ORTHO05D006651 5.1e-10 68.2 155 33.5
Prupe.4G278800 Prunus persica HOM05D000076 ORTHO05D006651 5.1e-10 68.2 65 52.3
TWI12G0292 Tripterygium wilfordii HOM05D000076 ORTHO05D006651 5.1e-10 68.2 155 34.8
unitig_0.g1120 Utricularia gibba HOM05D000076 ORTHO05D006651 5.1e-10 68.2 155 34.8
Aqoxy7G02155 Aquilegia oxysepala HOM05D000076 ORTHO05D006651 6.7e-10 67.8 133 37.6
Lsat_1_v5_gn_4_106080 Lactuca sativa HOM05D000076 ORTHO05D006651 6.7e-10 67.8 155 34.2
Potri.001G171500 Populus trichocarpa HOM05D000076 ORTHO05D006651 6.7e-10 67.8 131 36.6
CiPaw.03G185800 Carya illinoinensis HOM05D000076 ORTHO05D006651 1.1e-09 67.0 155 32.9
CiPaw.03G228600 Carya illinoinensis HOM05D000076 ORTHO05D006651 1.1e-09 67.0 155 32.9
Duzib235G1052 Durio zibethinus HOM05D000076 ORTHO05D006651 1.5e-09 66.6 155 34.2
Aa31LG8G2920 Aethionema arabicum HOM05D000076 ORTHO05D006651 2.0e-09 66.2 133 37.6
RcHm_v2.0_Chr2g0136251 Rosa chinensis HOM05D000076 ORTHO05D006651 2.0e-09 66.2 65 55.4
Sp3g14030 Schrenkiella parvula HOM05D000076 ORTHO05D006651 2.0e-09 66.2 134 35.8
CSS0022482 Camellia sinensis var. sinensis HOM05D000076 ORTHO05D006651 2.6e-09 65.9 65 50.8
CSS0042652 Camellia sinensis var. sinensis HOM05D000076 ORTHO05D006651 2.6e-09 65.9 65 50.8
BcaC05g28944 Brassica carinata HOM05D007418 ORTHO05D006651 3.3e-09 65.5 134 34.3
C05p50730 Brassica napus HOM05D007418 ORTHO05D006651 3.3e-09 65.5 134 34.3
BolC5t33820H Brassica oleracea HOM05D000076 ORTHO05D006651 3.3e-09 65.5 134 34.3
CSS0010684 Camellia sinensis var. sinensis HOM05D000076 ORTHO05D006651 3.3e-09 65.5 65 50.8
CiPaw.02G155700 Carya illinoinensis HOM05D000076 ORTHO05D006651 3.3e-09 65.5 154 33.1
CDE02G3459 Ceratophyllum demersum HOM05D000076 ORTHO05D006651 4.4e-09 65.1 157 32.5
CiPaw.07G036600 Carya illinoinensis HOM05D000076 ORTHO05D006651 9.7e-09 63.9 155 32.9
MD09G1220000 Malus domestica HOM05D000076 ORTHO05D006651 9.7e-09 63.9 154 34.4
HPP92_025297 Vanilla planifolia HOM05D000076 ORTHO05D006651 9.7e-09 63.9 140 32.1
DCAR_025498 Daucus carota HOM05D000076 ORTHO05D006651 1.7e-08 63.2 133 35.3
CiPaw.11G039200 Carya illinoinensis HOM05D000076 ORTHO05D006651 2.2e-08 62.8 155 32.3
HPP92_025294 Vanilla planifolia HOM05D000076 ORTHO05D006651 2.8e-08 62.4 131 32.8
BcaC08g43438 Brassica carinata HOM05D000076 ORTHO05D006651 4.8e-08 61.6 133 33.1
BraA06t23390Z Brassica rapa HOM05D000076 ORTHO05D006651 8.2e-08 60.8 133 32.3
A06p01720 Brassica napus HOM05D000076 ORTHO05D006651 1.8e-07 59.7 133 32.3
AL1G60910 Arabidopsis lyrata HOM05D000076 ORTHO05D006651 3.1e-07 58.9 134 32.1
AT1G52630 Arabidopsis thaliana HOM05D000076 ORTHO05D006651 3.1e-07 58.9 134 32.1
Thhalv10011490m.g Eutrema salsugineum HOM05D000076 ORTHO05D006651 3.1e-07 58.9 134 32.1
C06p08060 Brassica napus HOM05D000076 ORTHO05D006651 7.0e-07 57.8 65 44.6
BolC6t35889H Brassica oleracea HOM05D000076 ORTHO05D006651 7.0e-07 57.8 65 44.6
QL08p008496 Quercus lobata HOM05D000076 ORTHO05D006651 1.2e-06 57.0 93 34.4
SHI20604 Sapria himalayana HOM05D000076 ORTHO05D006651 1.2e-06 57.0 155 32.3
Carub.0001s4162 Capsella rubella HOM05D000076 ORTHO05D006651 1.5e-06 56.6 134 31.3
CDE04G3285 Ceratophyllum demersum HOM05D002557 ORTHO05D006651 1.5e-06 56.6 64 50.0
CARHR042750 Cardamine hirsuta HOM05D000076 ORTHO05D006651 2.0e-06 56.2 140 31.4
Sp1g39180 Schrenkiella parvula HOM05D000076 ORTHO05D006651 2.0e-06 56.2 134 31.3


User provided reference genes

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